RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 CMA1P23946 247 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 WEE1P30291 646 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 TXLNAP40222 546 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 AP3M2P53677 418 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 PTENP60484 403 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 EHHADHQ08426 723 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 PTGISQ16647 500 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 KIAA0753Q2KHM9 967 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 RESP18Q5W5W9 173 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 KRT79Q5XKE5 535 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 ADALQ6DHV7 355 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 PSAPL1Q6NUJ1 521 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 TMEM184AQ6ZMB5 413 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 STXBP4Q6ZWJ1 553 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 HOMER1Q86YM7 354 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 SLC9A9Q8IVB4 645 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 HACE1Q8IYU2 909 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 FAM26EQ8N5C1 309 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 LINC00301Q8NCQ3 95 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 GOLGA5Q8TBA6 731 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 GPKOWQ92917 476 aaPredicted RBP eCLIP3.13□□□□□ -1.91
MCF2-208ENST00000519895 PHKBQ93100 1093 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 VTI1AQ96AJ9 217 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 PGBD4Q96DM1 585 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 MED8Q96G25 268 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 MAP7D2Q96T17 732 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 DUSP9Q99956 384 aaKnown RBP3.13□□□□□ -1.91
MCF2-208ENST00000519895 EIF2AK1Q9BQI3 630 aaKnown RBP3.13□□□□□ -1.91
MCF2-208ENST00000519895 GCOM2Q9BZD3 368 aaPredicted RBP3.13□□□□□ -1.91
MCF2-208ENST00000519895 KIAA1586Q9HCI6 787 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 VAT1LQ9HCJ6 419 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 PDGFCQ9NRA1 345 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 WNT16Q9UBV4 365 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 FBXO2Q9UK22 296 aaPredicted RBP3.13□□□□□ -1.91
MCF2-208ENST00000519895 FBN1P35555 2871 aaKnown RBP3.13□□□□□ -1.91
MCF2-208ENST00000519895 TLDC2A0PJX2 215 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 H3BNC9 293 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 FSCN2O14926 492 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 B4GALT4O60513 344 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 MYL3P08590 195 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 CKBP12277 381 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 DARSP14868 501 aaKnown RBP3.13□□□□□ -1.91
MCF2-208ENST00000519895 CD46P15529 392 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 PFKLP17858 780 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 ERCC5P28715 1186 aaPredicted RBP3.13□□□□□ -1.91
MCF2-208ENST00000519895 PHKA2P46019 1235 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 CCT2P78371 535 aaKnown RBP3.13□□□□□ -1.91
MCF2-208ENST00000519895 PLCB3Q01970 1234 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 SCAPQ12770 1279 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 POSTNQ15063 836 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 UBE2SQ16763 222 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 LY6KQ17RY6 165 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 NT5DC1Q5TFE4 455 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 SLFN12LQ6IEE8 588 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 SEPT14Q6ZU15 432 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 C1orf186Q6ZWK4 172 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 ZNF598Q86UK7 904 aaKnown RBP3.13□□□□□ -1.91
MCF2-208ENST00000519895 TRIML1Q8N9V2 468 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 RASGRP4Q8TDF6 673 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 VWCEQ96DN2 955 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 CALML4Q96GE6 196 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 CRELD1Q96HD1 420 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 LRRC2Q9BYS8 371 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 METTL14Q9HCE5 456 aaKnown RBP3.13□□□□□ -1.91
MCF2-208ENST00000519895 AVENQ9NQS1 362 aaPredicted RBP3.13□□□□□ -1.91
MCF2-208ENST00000519895 TMEM161AQ9NX61 479 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 ARHGAP28Q9P2N2 729 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 ZMYM5Q9UJ78 669 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 GIT1Q9Y2X7 761 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 IRAK3Q9Y616 596 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 FRYQ5TBA9 3013 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 MYADML2A6NDP7 307 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 RSPH10B2B2RC85 870 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 BTBD18B2RXH4 712 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 H3BQV1 296 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 ATP9AO75110 1047 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 MICAL2O94851 1124 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 RSPH10BP0C881 870 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 MCF2P10911 925 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 MYCLP12524 364 aaPredicted RBP3.13□□□□□ -1.91
MCF2-208ENST00000519895 RARRES1P49788 294 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 NOVA1P51513 510 aaKnown RBP3.13□□□□□ -1.91
MCF2-208ENST00000519895 GPC3P51654 580 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 SLC12A3P55017 1021 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 GTF2BQ00403 316 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 PRKCEQ02156 737 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 RAD51AP2Q09MP3 1159 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 SPEM2Q0P670 501 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 SMARCB1Q12824 385 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 INF2Q27J81 1249 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 ZNF423Q2M1K9 1284 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 HSDL1Q3SXM5 330 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 PRR16Q569H4 304 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 JAKMIP3Q5VZ66 844 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 GDF6Q6KF10 455 aaPredicted RBP3.13□□□□□ -1.91
MCF2-208ENST00000519895 PDXDC2PQ6P474 469 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 PIK3AP1Q6ZUJ8 805 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 CYFIP1Q7L576 1253 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 FERMT3Q86UX7 667 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 CCDC60Q8IWA6 550 aaPredicted RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms