RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 CUL2Q13617 745 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 PPP2R5EQ16537 467 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 GPR162Q16538 588 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 ZBTB41Q5SVQ8 909 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 ARMCX2Q7L311 632 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 MAATS1Q7Z4T9 603 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 RHPN2Q8IUC4 686 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 GOLGA6L1Q8N7Z2 621 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 COPS5Q92905 334 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 ELMO3Q96BJ8 720 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 RNPC3Q96LT9 517 aaKnown RBP9.04□□□□□ -0.96
HMGB4-203ENST00000519684 RUFY1Q96T51 708 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 ACO2Q99798 780 aaKnown RBP9.04□□□□□ -0.96
HMGB4-203ENST00000519684 WNT8AQ9H1J5 351 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 ERAP1Q9NZ08 941 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 VPS18Q9P253 973 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 SLC45A1Q9Y2W3 748 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 PCDHB4Q9Y5E5 795 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 IVNS1ABPQ9Y6Y0 642 aa9.04□□□□□ -0.96
HMGB4-203ENST00000519684 MCM3APO60318 1980 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 PTPRJQ12913 1337 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 IGKV6-21A0A0C4DH24 114 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 PDHXO00330 501 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 OGTO15294 1046 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 ATMINO43313 823 aaPredicted RBP9.03□□□□□ -0.96
HMGB4-203ENST00000519684 SPOPO43791 374 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 MSCO60682 206 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 HSF2BPO75031 334 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 VNN1O95497 513 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 FGGP02679 453 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 EDN1P05305 212 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 GTF2A2P52657 109 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 WNT7BP56706 349 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 CUL1Q13616 776 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 LAMC2Q13753 1193 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 NCOA4Q13772 614 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 SEL1L2Q5TEA6 688 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 TRIM72Q6ZMU5 477 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 WDR49Q8IV35 697 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.03□□□□□ -0.96
HMGB4-203ENST00000519684 DDX1Q92499 740 aaKnown RBP9.03□□□□□ -0.96
HMGB4-203ENST00000519684 FAM212AQ96EL1 285 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 FAM84AQ96KN4 292 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 NLRP4Q96MN2 994 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 PLEKHA4Q9H4M7 779 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 ZCCHC17Q9NP64 241 aaKnown RBP9.03□□□□□ -0.96
HMGB4-203ENST00000519684 VTA1Q9NP79 307 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 CNOT8Q9UFF9 292 aaKnown RBP9.03□□□□□ -0.96
HMGB4-203ENST00000519684 NFU1Q9UMS0 254 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 CNTNAP2Q9UHC6 1331 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 CCL15-CCL14A0A0B4J2E2 113 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 ZBTB42B2RXF5 422 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 ASAP2O43150 1006 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 GH1P01241 217 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 CLTAP09496 248 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 MYBL1P10243 752 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 HSPA6P17066 643 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 COMTP21964 271 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 NSFP46459 744 aaKnown RBP9.03□□□□□ -0.96
HMGB4-203ENST00000519684 GCLCP48506 637 aaPredicted RBP9.03□□□□□ -0.96
HMGB4-203ENST00000519684 NOP14P78316 857 aaKnown RBP9.03□□□□□ -0.96
HMGB4-203ENST00000519684 HLTFQ14527 1009 aaKnown RBP eCLIP9.03□□□□□ -0.96
HMGB4-203ENST00000519684 CCL15Q16663 113 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 SEZ6Q53EL9 994 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 ZNF484Q5JVG2 852 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 SPOPLQ6IQ16 392 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 EFCAB12Q6NXP0 572 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 PPP1R2P3Q6NXS1 205 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 WHAMMQ8TF30 809 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 TRAPPC12Q8WVT3 735 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 CASKIN2Q8WXE0 1202 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 ZSWIM1Q9BR11 485 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 DDX47Q9H0S4 455 aaKnown RBP9.03□□□□□ -0.96
HMGB4-203ENST00000519684 PDGFCQ9NRA1 345 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 FAN1Q9Y2M0 1017 aa9.03□□□□□ -0.96
HMGB4-203ENST00000519684 ESYT3A0FGR9 886 aa9.02□□□□□ -0.97
HMGB4-203ENST00000519684 INO80B-WBP1J3KQ70 363 aa9.02□□□□□ -0.97
HMGB4-203ENST00000519684 SART1O43290 800 aaKnown RBP9.02□□□□□ -0.97
HMGB4-203ENST00000519684 ADORA2AP29274 412 aa9.02□□□□□ -0.97
HMGB4-203ENST00000519684 CARSP49589 748 aaKnown RBP9.02□□□□□ -0.97
HMGB4-203ENST00000519684 MCL1Q07820 350 aa9.02□□□□□ -0.97
HMGB4-203ENST00000519684 MKRN4PQ13434 485 aaPredicted RBP9.02□□□□□ -0.97
HMGB4-203ENST00000519684 TRPC3Q13507 836 aa9.02□□□□□ -0.97
HMGB4-203ENST00000519684 ZNF792Q3KQV3 632 aa9.02□□□□□ -0.97
HMGB4-203ENST00000519684 ZNF568Q3ZCX4 644 aa9.02□□□□□ -0.97
HMGB4-203ENST00000519684 LIN9Q5TKA1 542 aa9.02□□□□□ -0.97
HMGB4-203ENST00000519684 ATF7IP2Q5U623 682 aa9.02□□□□□ -0.97
HMGB4-203ENST00000519684 ALS2CLQ60I27 953 aa9.02□□□□□ -0.97
HMGB4-203ENST00000519684 MPZL3Q6UWV2 235 aa9.02□□□□□ -0.97
HMGB4-203ENST00000519684 EIF1ADQ8N9N8 165 aaKnown RBP9.02□□□□□ -0.97
HMGB4-203ENST00000519684 OR5B17Q8NGF7 314 aa9.02□□□□□ -0.97
HMGB4-203ENST00000519684 ZBTB9Q96C00 473 aa9.02□□□□□ -0.97
HMGB4-203ENST00000519684 INO80BQ9C086 356 aaPredicted RBP9.02□□□□□ -0.97
HMGB4-203ENST00000519684 CCDC66A2RUB6 948 aa9.02□□□□□ -0.97
HMGB4-203ENST00000519684 ZSCAN5CA6NGD5 496 aaPredicted RBP9.02□□□□□ -0.97
HMGB4-203ENST00000519684 ACKR2O00590 384 aa9.02□□□□□ -0.97
HMGB4-203ENST00000519684 STRNO43815 780 aa9.02□□□□□ -0.97
HMGB4-203ENST00000519684 OPA1O60313 960 aa9.02□□□□□ -0.97
HMGB4-203ENST00000519684 TNNC2P02585 160 aa9.02□□□□□ -0.97
HMGB4-203ENST00000519684 TMEM191BP0C7N4 346 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms