RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 CLCNKBP51801 687 aa11.92□□□□□ -0.5
PVT1-208ENST00000519481 SMTNP53814 917 aa11.92□□□□□ -0.5
PVT1-208ENST00000519481 OSTNP61366 133 aa11.92□□□□□ -0.5
PVT1-208ENST00000519481 RILPL1Q5EBL4 403 aa11.92□□□□□ -0.5
PVT1-208ENST00000519481 MTSS1LQ765P7 747 aa11.92□□□□□ -0.5
PVT1-208ENST00000519481 CCDC105Q8IYK2 499 aa11.92□□□□□ -0.5
PVT1-208ENST00000519481 KCTD17Q8N5Z5 321 aa11.92□□□□□ -0.5
PVT1-208ENST00000519481 DTWD2Q8NBA8 298 aa11.92□□□□□ -0.5
PVT1-208ENST00000519481 SLC7A14Q8TBB6 771 aa11.92□□□□□ -0.5
PVT1-208ENST00000519481 CDK5RAP3Q96JB5 506 aa11.92□□□□□ -0.5
PVT1-208ENST00000519481 CDT1Q9H211 546 aa11.92□□□□□ -0.5
PVT1-208ENST00000519481 UPF2Q9HAU5 1272 aaKnown RBP11.92□□□□□ -0.5
PVT1-208ENST00000519481 MTRRQ9UBK8 725 aa11.92□□□□□ -0.5
PVT1-208ENST00000519481 CDH7Q9ULB5 785 aa11.92□□□□□ -0.5
PVT1-208ENST00000519481 CA14Q9ULX7 337 aa11.92□□□□□ -0.5
PVT1-208ENST00000519481 BACE2Q9Y5Z0 518 aa11.92□□□□□ -0.5
PVT1-208ENST00000519481 SMIM28A0A1B0GU29 152 aa11.91□□□□□ -0.5
PVT1-208ENST00000519481 PP2D1A8MPX8 630 aa11.91□□□□□ -0.5
PVT1-208ENST00000519481 ANHXE9PGG2 379 aa11.91□□□□□ -0.5
PVT1-208ENST00000519481 POU2F2P09086 479 aa11.91□□□□□ -0.5
PVT1-208ENST00000519481 HARSP12081 509 aaKnown RBP11.91□□□□□ -0.5
PVT1-208ENST00000519481 CDC25AP30304 524 aa11.91□□□□□ -0.5
PVT1-208ENST00000519481 HTR4Q13639 388 aa11.91□□□□□ -0.5
PVT1-208ENST00000519481 UPP1Q16831 310 aa11.91□□□□□ -0.5
PVT1-208ENST00000519481 RINT1Q6NUQ1 792 aa11.91□□□□□ -0.5
PVT1-208ENST00000519481 MPZL3Q6UWV2 235 aa11.91□□□□□ -0.5
PVT1-208ENST00000519481 NKD2Q969F2 451 aaPredicted RBP11.91□□□□□ -0.5
PVT1-208ENST00000519481 SHDQ96IW2 340 aa11.91□□□□□ -0.5
PVT1-208ENST00000519481 KIF2CQ99661 725 aa11.91□□□□□ -0.5
PVT1-208ENST00000519481 TARS2Q9BW92 718 aaKnown RBP11.91□□□□□ -0.5
PVT1-208ENST00000519481 CXCL16Q9H2A7 254 aa11.91□□□□□ -0.5
PVT1-208ENST00000519481 TBC1D17Q9HA65 648 aa11.91□□□□□ -0.5
PVT1-208ENST00000519481 ARHGEF3Q9NR81 526 aa11.91□□□□□ -0.5
PVT1-208ENST00000519481 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.91□□□□□ -0.5
PVT1-208ENST00000519481 ARHGAP28Q9P2N2 729 aa11.91□□□□□ -0.5
PVT1-208ENST00000519481 NUB1Q9Y5A7 615 aa11.91□□□□□ -0.5
PVT1-208ENST00000519481 CDY1Q9Y6F8 540 aa11.91□□□□□ -0.5
PVT1-208ENST00000519481 NUMBLQ9Y6R0 609 aa11.91□□□□□ -0.5
PVT1-208ENST00000519481 DOCK8Q8NF50 2099 aa11.9□□□□□ -0.5
PVT1-208ENST00000519481 KRBA1A5PL33 1030 aa11.9□□□□□ -0.5
PVT1-208ENST00000519481 H0YCG3 227 aa11.9□□□□□ -0.5
PVT1-208ENST00000519481 H7C4K7 107 aa11.9□□□□□ -0.5
PVT1-208ENST00000519481 PODXLO00592 558 aa11.9□□□□□ -0.5
PVT1-208ENST00000519481 SLC16A4O15374 487 aa11.9□□□□□ -0.5
PVT1-208ENST00000519481 ADAM12O43184 909 aa11.9□□□□□ -0.5
PVT1-208ENST00000519481 PI15O43692 258 aa11.9□□□□□ -0.5
PVT1-208ENST00000519481 LRG1P02750 347 aa11.9□□□□□ -0.5
PVT1-208ENST00000519481 GUCY2CP25092 1073 aa11.9□□□□□ -0.5
PVT1-208ENST00000519481 TKTP29401 623 aaKnown RBP11.9□□□□□ -0.5
PVT1-208ENST00000519481 RPL9P32969 192 aaKnown RBP11.9□□□□□ -0.5
PVT1-208ENST00000519481 MATR3P43243 847 aaKnown RBP eCLIP11.9□□□□□ -0.57e-9■■■□□ 18.1
PVT1-208ENST00000519481 NTHL1P78549 312 aa11.9□□□□□ -0.5
PVT1-208ENST00000519481 ANGPT1Q15389 498 aa11.9□□□□□ -0.5
PVT1-208ENST00000519481 PABPC1LQ4VXU2 614 aaKnown RBP11.9□□□□□ -0.5
PVT1-208ENST00000519481 XKR4Q5GH76 650 aa11.9□□□□□ -0.5
PVT1-208ENST00000519481 RIF1Q5UIP0 2472 aaKnown RBP11.9□□□□□ -0.5
PVT1-208ENST00000519481 PHLDB3Q6NSJ2 640 aa11.9□□□□□ -0.5
PVT1-208ENST00000519481 C1orf186Q6ZWK4 172 aa11.9□□□□□ -0.5
PVT1-208ENST00000519481 DAW1Q8N136 415 aa11.9□□□□□ -0.5
PVT1-208ENST00000519481 CEP120Q8N960 986 aa11.9□□□□□ -0.5
PVT1-208ENST00000519481 GPR152Q8TDT2 470 aa11.9□□□□□ -0.5
PVT1-208ENST00000519481 SPIRE2Q8WWL2 714 aa11.9□□□□□ -0.5
PVT1-208ENST00000519481 RUSC1Q9BVN2 902 aa11.9□□□□□ -0.5
PVT1-208ENST00000519481 GOLGA2P5Q9HBQ8 144 aa11.9□□□□□ -0.5
PVT1-208ENST00000519481 PTPRHQ9HD43 1115 aa11.9□□□□□ -0.5
PVT1-208ENST00000519481 SLC2A4RGQ9NR83 387 aa11.9□□□□□ -0.5
PVT1-208ENST00000519481 KCND2Q9NZV8 630 aa11.9□□□□□ -0.5
PVT1-208ENST00000519481 KCNH3Q9ULD8 1083 aa11.9□□□□□ -0.5
PVT1-208ENST00000519481 PRR23AA6NEV1 266 aa11.89□□□□□ -0.51
PVT1-208ENST00000519481 SFI1A8K8P3 1242 aa11.89□□□□□ -0.51
PVT1-208ENST00000519481 I3L4J1 428 aa11.89□□□□□ -0.51
PVT1-208ENST00000519481 PRRG1O14668 218 aa11.89□□□□□ -0.51
PVT1-208ENST00000519481 SYN3O14994 580 aa11.89□□□□□ -0.51
PVT1-208ENST00000519481 TOM1L1O75674 476 aa11.89□□□□□ -0.51
PVT1-208ENST00000519481 PLS3P13797 630 aa11.89□□□□□ -0.51
PVT1-208ENST00000519481 KCNE1P15382 129 aa11.89□□□□□ -0.51
PVT1-208ENST00000519481 BRCC3P46736 316 aa11.89□□□□□ -0.51
PVT1-208ENST00000519481 ATP2C1P98194 919 aaPredicted RBP11.89□□□□□ -0.51
PVT1-208ENST00000519481 PFKPQ01813 784 aa11.89□□□□□ -0.51
PVT1-208ENST00000519481 NOLC1Q14978 699 aaKnown RBP eCLIP11.89□□□□□ -0.516e-11■■■■□ 21.2
PVT1-208ENST00000519481 C8orf34Q49A92 452 aa11.89□□□□□ -0.51
PVT1-208ENST00000519481 ALKAL1Q6UXT8 129 aa11.89□□□□□ -0.51
PVT1-208ENST00000519481 FRMD5Q7Z6J6 570 aa11.89□□□□□ -0.51
PVT1-208ENST00000519481 SYT2Q8N9I0 419 aaPredicted RBP11.89□□□□□ -0.51
PVT1-208ENST00000519481 FGF13Q92913 245 aa11.89□□□□□ -0.51
PVT1-208ENST00000519481 BICD1Q96G01 975 aa11.89□□□□□ -0.51
PVT1-208ENST00000519481 SNX27Q96L92 541 aa11.89□□□□□ -0.51
PVT1-208ENST00000519481 NTPCRQ9BSD7 190 aaKnown RBP11.89□□□□□ -0.51
PVT1-208ENST00000519481 MMTAG2Q9BU76 263 aaKnown RBP11.89□□□□□ -0.51
PVT1-208ENST00000519481 LARSQ9P2J5 1176 aaKnown RBP11.89□□□□□ -0.51
PVT1-208ENST00000519481 ANKFY1Q9P2R3 1169 aa11.89□□□□□ -0.51
PVT1-208ENST00000519481 MRPS23Q9Y3D9 190 aaKnown RBP11.89□□□□□ -0.51
PVT1-208ENST00000519481 SIT1Q9Y3P8 196 aa11.89□□□□□ -0.51
PVT1-208ENST00000519481 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.89□□□□□ -0.51
PVT1-208ENST00000519481 FAM186AA6NE01 2351 aa11.88□□□□□ -0.51
PVT1-208ENST00000519481 VWA3AA6NCI4 1184 aa11.88□□□□□ -0.51
PVT1-208ENST00000519481 CLDN3O15551 220 aa11.88□□□□□ -0.51
PVT1-208ENST00000519481 SLC26A4O43511 780 aa11.88□□□□□ -0.51
PVT1-208ENST00000519481 PLA2G4BP0C869 781 aa11.88□□□□□ -0.51
PVT1-208ENST00000519481 PTPN2P17706 415 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms