RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 ATF7IP2Q5U623 682 aa28.5■■■□□ 2.15
COL13A1-210ENST00000517713 MPZL3Q6UWV2 235 aa28.5■■■□□ 2.15
COL13A1-210ENST00000517713 WDR49Q8IV35 697 aa28.5■■■□□ 2.15
COL13A1-210ENST00000517713 HDAC7Q8WUI4 952 aa28.5■■■□□ 2.15
COL13A1-210ENST00000517713 APOBEC3GQ9HC16 384 aaKnown RBP28.5■■■□□ 2.15
COL13A1-210ENST00000517713 CPSF3Q9UKF6 684 aaKnown RBP28.5■■■□□ 2.15
COL13A1-210ENST00000517713 ZNF286BP0CG31 522 aa28.5■■■□□ 2.15
COL13A1-210ENST00000517713 C8orf74Q6P047 294 aa28.5■■■□□ 2.15
COL13A1-210ENST00000517713 CCNI2Q6ZMN8 369 aaPredicted RBP28.5■■■□□ 2.15
COL13A1-210ENST00000517713 PTPRHQ9HD43 1115 aa28.5■■■□□ 2.15
COL13A1-210ENST00000517713 MAGEB2O15479 319 aa28.49■■■□□ 2.15
COL13A1-210ENST00000517713 PPFIA4O75335 1185 aa28.49■■■□□ 2.15
COL13A1-210ENST00000517713 MBTD1Q05BQ5 628 aa28.49■■■□□ 2.15
COL13A1-210ENST00000517713 CUL2Q13617 745 aa28.49■■■□□ 2.15
COL13A1-210ENST00000517713 NCOA4Q13772 614 aa28.49■■■□□ 2.15
COL13A1-210ENST00000517713 TINF2Q9BSI4 451 aa28.49■■■□□ 2.15
COL13A1-210ENST00000517713 C16orf70Q9BSU1 422 aa28.49■■■□□ 2.15
COL13A1-210ENST00000517713 NFKBIZQ9BYH8 718 aa28.49■■■□□ 2.15
COL13A1-210ENST00000517713 DMGDHQ9UI17 866 aaKnown RBP28.49■■■□□ 2.15
COL13A1-210ENST00000517713 PCDHB2Q9Y5E7 798 aa28.49■■■□□ 2.15
COL13A1-210ENST00000517713 BPIFB4P59827 614 aa28.48■■■□□ 2.15
COL13A1-210ENST00000517713 SURF1Q15526 300 aa28.48■■■□□ 2.15
COL13A1-210ENST00000517713 B4GALT5O43286 388 aa28.48■■■□□ 2.15
COL13A1-210ENST00000517713 SMPD1P17405 629 aa28.48■■■□□ 2.15
COL13A1-210ENST00000517713 ACO1P21399 889 aaKnown RBP28.48■■■□□ 2.15
COL13A1-210ENST00000517713 SLC7A5Q01650 507 aa28.48■■■□□ 2.15
COL13A1-210ENST00000517713 TMEM132AQ24JP5 1023 aa28.48■■■□□ 2.15
COL13A1-210ENST00000517713 CST9Q5W186 159 aa28.48■■■□□ 2.15
COL13A1-210ENST00000517713 ACAD10Q6JQN1 1059 aa28.48■■■□□ 2.15
COL13A1-210ENST00000517713 ZNF677Q86XU0 584 aa28.48■■■□□ 2.15
COL13A1-210ENST00000517713 FAM212AQ96EL1 285 aa28.48■■■□□ 2.15
COL13A1-210ENST00000517713 ABHD16BQ9H3Z7 469 aa28.48■■■□□ 2.15
COL13A1-210ENST00000517713 MINDY3Q9H8M7 445 aa28.48■■■□□ 2.15
COL13A1-210ENST00000517713 TMEM59LQ9UK28 342 aa28.48■■■□□ 2.15
COL13A1-210ENST00000517713 COL1A2P08123 1366 aa28.47■■■□□ 2.15
COL13A1-210ENST00000517713 CALCAP01258 141 aa28.47■■■□□ 2.15
COL13A1-210ENST00000517713 CLTAP09496 248 aa28.47■■■□□ 2.15
COL13A1-210ENST00000517713 TBXAS1P24557 533 aaPredicted RBP28.47■■■□□ 2.15
COL13A1-210ENST00000517713 NOP14P78316 857 aaKnown RBP28.47■■■□□ 2.15
COL13A1-210ENST00000517713 MRPS25P82663 173 aaKnown RBP28.47■■■□□ 2.15
COL13A1-210ENST00000517713 POU5F1BQ06416 359 aa28.47■■■□□ 2.15
COL13A1-210ENST00000517713 ACVR2BQ13705 512 aa28.47■■■□□ 2.15
COL13A1-210ENST00000517713 CLEC16AQ2KHT3 1053 aa28.47■■■□□ 2.15
COL13A1-210ENST00000517713 ZNF568Q3ZCX4 644 aa28.47■■■□□ 2.15
COL13A1-210ENST00000517713 DUSP28Q4G0W2 176 aa28.47■■■□□ 2.15
COL13A1-210ENST00000517713 C11orf63Q6NUN7 778 aa28.47■■■□□ 2.15
COL13A1-210ENST00000517713 RASGEF1CQ8N431 466 aa28.47■■■□□ 2.15
COL13A1-210ENST00000517713 LINC01465Q8N7H1 131 aa28.47■■■□□ 2.15
COL13A1-210ENST00000517713 SLC15A5A6NIM6 579 aa28.47■■■□□ 2.15
COL13A1-210ENST00000517713 PGRMC1O00264 195 aaKnown RBP28.47■■■□□ 2.15
COL13A1-210ENST00000517713 MTA2O94776 668 aa28.47■■■□□ 2.15
COL13A1-210ENST00000517713 PHKA2P46019 1235 aa28.47■■■□□ 2.15
COL13A1-210ENST00000517713 NPLOC4Q8TAT6 608 aa28.47■■■□□ 2.15
COL13A1-210ENST00000517713 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.47■■■□□ 2.15
COL13A1-210ENST00000517713 IFT122Q9HBG6 1241 aa28.47■■■□□ 2.15
COL13A1-210ENST00000517713 STIM2Q9P246 746 aa28.47■■■□□ 2.15
COL13A1-210ENST00000517713 NUB1Q9Y5A7 615 aa28.47■■■□□ 2.15
COL13A1-210ENST00000517713 EVPLQ92817 2033 aa28.46■■■□□ 2.15
COL13A1-210ENST00000517713 H3BRB1 525 aa28.46■■■□□ 2.15
COL13A1-210ENST00000517713 DDX3YO15523 660 aaKnown RBP28.46■■■□□ 2.15
COL13A1-210ENST00000517713 CYP1A2P05177 515 aa28.46■■■□□ 2.15
COL13A1-210ENST00000517713 IMPG2Q9BZV3 1241 aa28.46■■■□□ 2.15
COL13A1-210ENST00000517713 TUT1Q9H6E5 874 aaKnown RBP28.46■■■□□ 2.15
COL13A1-210ENST00000517713 PRMT7Q9NVM4 692 aaPredicted RBP28.46■■■□□ 2.15
COL13A1-210ENST00000517713 ZHX1Q9UKY1 873 aaPredicted RBP28.46■■■□□ 2.15
COL13A1-210ENST00000517713 TNFSF13BQ9Y275 285 aa28.46■■■□□ 2.15
COL13A1-210ENST00000517713 ALG6Q9Y672 507 aa28.46■■■□□ 2.15
COL13A1-210ENST00000517713 CLSTN1O94985 981 aa28.45■■■□□ 2.15
COL13A1-210ENST00000517713 TNNC1P63316 161 aa28.45■■■□□ 2.15
COL13A1-210ENST00000517713 DUOXA2Q1HG44 320 aa28.45■■■□□ 2.15
COL13A1-210ENST00000517713 EEF1DP3Q658K8 133 aa28.45■■■□□ 2.15
COL13A1-210ENST00000517713 THNSL1Q8IYQ7 743 aa28.45■■■□□ 2.15
COL13A1-210ENST00000517713 ZNF653Q96CK0 615 aa28.45■■■□□ 2.15
COL13A1-210ENST00000517713 KRT12Q99456 494 aa28.45■■■□□ 2.15
COL13A1-210ENST00000517713 HINFPQ9BQA5 517 aa28.45■■■□□ 2.15
COL13A1-210ENST00000517713 MTMR12Q9C0I1 747 aa28.45■■■□□ 2.15
COL13A1-210ENST00000517713 GTF3C4Q9UKN8 822 aa28.45■■■□□ 2.15
COL13A1-210ENST00000517713 PCDHB4Q9Y5E5 795 aa28.45■■■□□ 2.15
COL13A1-210ENST00000517713 ATMINO43313 823 aaPredicted RBP28.45■■■□□ 2.14
COL13A1-210ENST00000517713 CST3P01034 146 aaPredicted RBP28.45■■■□□ 2.14
COL13A1-210ENST00000517713 IQCF3P0C7M6 154 aa28.45■■■□□ 2.14
COL13A1-210ENST00000517713 CASP8Q14790 479 aa28.45■■■□□ 2.14
COL13A1-210ENST00000517713 IQSEC1Q6DN90 963 aa28.45■■■□□ 2.14
COL13A1-210ENST00000517713 OR6J1Q8NGC5 347 aa28.45■■■□□ 2.14
COL13A1-210ENST00000517713 SLC5A4Q9NY91 659 aa28.45■■■□□ 2.14
COL13A1-210ENST00000517713 CPA4Q9UI42 421 aa28.45■■■□□ 2.14
COL13A1-210ENST00000517713 AKT3Q9Y243 479 aa28.45■■■□□ 2.14
COL13A1-210ENST00000517713 NOC2LQ9Y3T9 749 aaKnown RBP28.45■■■□□ 2.14
COL13A1-210ENST00000517713 MYBL2P10244 700 aa28.44■■■□□ 2.14
COL13A1-210ENST00000517713 TMOD1P28289 359 aa28.44■■■□□ 2.14
COL13A1-210ENST00000517713 HUNKP57058 714 aa28.44■■■□□ 2.14
COL13A1-210ENST00000517713 MTHFD1LQ6UB35 978 aa28.44■■■□□ 2.14
COL13A1-210ENST00000517713 CHORDC1Q9UHD1 332 aaPredicted RBP28.44■■■□□ 2.14
COL13A1-210ENST00000517713 UMODL1Q5DID0 1318 aa28.44■■■□□ 2.14
COL13A1-210ENST00000517713 MMP3P08254 477 aa28.43■■■□□ 2.14
COL13A1-210ENST00000517713 UNGP13051 313 aaPredicted RBP28.43■■■□□ 2.14
COL13A1-210ENST00000517713 FAM187BQ17R55 369 aa28.43■■■□□ 2.14
COL13A1-210ENST00000517713 SCARA3Q6AZY7 606 aa28.43■■■□□ 2.14
COL13A1-210ENST00000517713 CDR2LQ86X02 465 aaPredicted RBP28.43■■■□□ 2.14
COL13A1-210ENST00000517713 MSL3Q8N5Y2 521 aaKnown RBP28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms