RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 LYPLA2O95372 231 aa12.67□□□□□ -0.38
TRAPPC9-203ENST00000517667 LRG1P02750 347 aa12.67□□□□□ -0.38
TRAPPC9-203ENST00000517667 NEFLP07196 543 aa12.67□□□□□ -0.38
TRAPPC9-203ENST00000517667 PTPN2P17706 415 aa12.67□□□□□ -0.38
TRAPPC9-203ENST00000517667 FGFR3P22607 806 aa12.67□□□□□ -0.38
TRAPPC9-203ENST00000517667 HSPA4P34932 840 aa12.67□□□□□ -0.38
TRAPPC9-203ENST00000517667 CNR2P34972 360 aa12.67□□□□□ -0.38
TRAPPC9-203ENST00000517667 RBM25P49756 843 aaKnown RBP12.67□□□□□ -0.38
TRAPPC9-203ENST00000517667 SPIRE1Q08AE8 756 aa12.67□□□□□ -0.38
TRAPPC9-203ENST00000517667 NAB2Q15742 525 aa12.67□□□□□ -0.38
TRAPPC9-203ENST00000517667 CSRP2Q16527 193 aa12.67□□□□□ -0.38
TRAPPC9-203ENST00000517667 SLC5A9Q2M3M2 681 aa12.67□□□□□ -0.38
TRAPPC9-203ENST00000517667 PRR23CQ6ZRP0 262 aa12.67□□□□□ -0.38
TRAPPC9-203ENST00000517667 PRR23BQ6ZRT6 265 aa12.67□□□□□ -0.38
TRAPPC9-203ENST00000517667 ANKS3Q6ZW76 656 aa12.67□□□□□ -0.38
TRAPPC9-203ENST00000517667 ZNF687Q8N1G0 1237 aa12.67□□□□□ -0.38
TRAPPC9-203ENST00000517667 ADPGKQ9BRR6 497 aa12.67□□□□□ -0.38
TRAPPC9-203ENST00000517667 PLA2G2FQ9BZM2 168 aa12.67□□□□□ -0.38
TRAPPC9-203ENST00000517667 ZFP14Q9HCL3 533 aa12.67□□□□□ -0.38
TRAPPC9-203ENST00000517667 SEMA4GQ9NTN9 838 aa12.67□□□□□ -0.38
TRAPPC9-203ENST00000517667 NDRG2Q9UN36 371 aaKnown RBP12.67□□□□□ -0.38
TRAPPC9-203ENST00000517667 BACE2Q9Y5Z0 518 aa12.67□□□□□ -0.38
TRAPPC9-203ENST00000517667 PDCD11Q14690 1871 aaKnown RBP12.67□□□□□ -0.38
TRAPPC9-203ENST00000517667 LRRIQ4A6NIV6 560 aa12.66□□□□□ -0.38
TRAPPC9-203ENST00000517667 SHISA7A6NL88 538 aa12.66□□□□□ -0.38
TRAPPC9-203ENST00000517667 N4BP3O15049 544 aa12.66□□□□□ -0.38
TRAPPC9-203ENST00000517667 RECQL4O94761 1208 aa12.66□□□□□ -0.38
TRAPPC9-203ENST00000517667 MICAL2O94851 1124 aa12.66□□□□□ -0.38
TRAPPC9-203ENST00000517667 XBP1P17861 261 aa12.66□□□□□ -0.38
TRAPPC9-203ENST00000517667 DMWDQ09019 674 aa12.66□□□□□ -0.38
TRAPPC9-203ENST00000517667 SIM2Q14190 667 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC9-203ENST00000517667 LPAL2Q16609 132 aa12.66□□□□□ -0.38
TRAPPC9-203ENST00000517667 FAM187BQ17R55 369 aa12.66□□□□□ -0.38
TRAPPC9-203ENST00000517667 TANGO2Q6ICL3 276 aa12.66□□□□□ -0.38
TRAPPC9-203ENST00000517667 C1orf228Q6PIY5 440 aa12.66□□□□□ -0.38
TRAPPC9-203ENST00000517667 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC9-203ENST00000517667 POTEDQ86YR6 584 aa12.66□□□□□ -0.38
TRAPPC9-203ENST00000517667 ZBTB8OSQ8IWT0 167 aa12.66□□□□□ -0.38
TRAPPC9-203ENST00000517667 UROC1Q96N76 676 aa12.66□□□□□ -0.38
TRAPPC9-203ENST00000517667 TRMT61BQ9BVS5 477 aaKnown RBP12.66□□□□□ -0.38
TRAPPC9-203ENST00000517667 POLR3FQ9H1D9 316 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC9-203ENST00000517667 ANGPTL2Q9UKU9 493 aa12.66□□□□□ -0.38
TRAPPC9-203ENST00000517667 CEP295Q9C0D2 2601 aa12.66□□□□□ -0.38
TRAPPC9-203ENST00000517667 ARHGEF37A1IGU5 675 aa12.65□□□□□ -0.38
TRAPPC9-203ENST00000517667 ZNF197O14709 1029 aa12.65□□□□□ -0.38
TRAPPC9-203ENST00000517667 CEBPBP17676 345 aa12.65□□□□□ -0.38
TRAPPC9-203ENST00000517667 PSMC3P17980 439 aa12.65□□□□□ -0.38
TRAPPC9-203ENST00000517667 FCARP24071 287 aa12.65□□□□□ -0.38
TRAPPC9-203ENST00000517667 ELF1P32519 619 aa12.65□□□□□ -0.38
TRAPPC9-203ENST00000517667 CXCL12P48061 93 aa12.65□□□□□ -0.38
TRAPPC9-203ENST00000517667 RARRES1P49788 294 aa12.65□□□□□ -0.38
TRAPPC9-203ENST00000517667 TMEM132AQ24JP5 1023 aa12.65□□□□□ -0.38
TRAPPC9-203ENST00000517667 CDCA2Q69YH5 1023 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC9-203ENST00000517667 ZNF461Q8TAF7 563 aa12.65□□□□□ -0.38
TRAPPC9-203ENST00000517667 FAM3CQ92520 227 aa12.65□□□□□ -0.38
TRAPPC9-203ENST00000517667 ZNF274Q96GC6 653 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC9-203ENST00000517667 MSANTD3Q96H12 275 aa12.65□□□□□ -0.38
TRAPPC9-203ENST00000517667 HSD17B14Q9BPX1 270 aa12.65□□□□□ -0.38
TRAPPC9-203ENST00000517667 EIF2AK1Q9BQI3 630 aaKnown RBP12.65□□□□□ -0.38
TRAPPC9-203ENST00000517667 C2orf40Q9H1Z8 148 aa12.65□□□□□ -0.38
TRAPPC9-203ENST00000517667 FZD8Q9H461 694 aa12.65□□□□□ -0.38
TRAPPC9-203ENST00000517667 PDZD7Q9H5P4 517 aa12.65□□□□□ -0.38
TRAPPC9-203ENST00000517667 LMAN1LQ9HAT1 526 aa12.65□□□□□ -0.38
TRAPPC9-203ENST00000517667 SNTG2Q9NY99 539 aa12.65□□□□□ -0.38
TRAPPC9-203ENST00000517667 PIAS3Q9Y6X2 628 aa12.65□□□□□ -0.38
TRAPPC9-203ENST00000517667 F5P12259 2224 aa12.65□□□□□ -0.38
TRAPPC9-203ENST00000517667 GREB1Q4ZG55 1949 aa12.64□□□□□ -0.39
TRAPPC9-203ENST00000517667 PRRG1O14668 218 aa12.64□□□□□ -0.39
TRAPPC9-203ENST00000517667 CDKL5O76039 1030 aa12.64□□□□□ -0.39
TRAPPC9-203ENST00000517667 B3GAT3O94766 335 aa12.64□□□□□ -0.39
TRAPPC9-203ENST00000517667 XRCC6P12956 609 aaKnown RBP eCLIP12.64□□□□□ -0.39
TRAPPC9-203ENST00000517667 MLLT6P55198 1093 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC9-203ENST00000517667 PRPF4BQ13523 1007 aaKnown RBP12.64□□□□□ -0.39
TRAPPC9-203ENST00000517667 GRM2Q14416 872 aa12.64□□□□□ -0.39
TRAPPC9-203ENST00000517667 MAPK6Q16659 721 aa12.64□□□□□ -0.39
TRAPPC9-203ENST00000517667 FAM78AQ5JUQ0 283 aa12.64□□□□□ -0.39
TRAPPC9-203ENST00000517667 PRSS36Q5K4E3 855 aa12.64□□□□□ -0.39
TRAPPC9-203ENST00000517667 IL31Q6EBC2 164 aa12.64□□□□□ -0.39
TRAPPC9-203ENST00000517667 SLC8B1Q6J4K2 584 aa12.64□□□□□ -0.39
TRAPPC9-203ENST00000517667 PIK3AP1Q6ZUJ8 805 aa12.64□□□□□ -0.39
TRAPPC9-203ENST00000517667 PDZD4Q76G19 769 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC9-203ENST00000517667 MAP4K3Q8IVH8 894 aa12.64□□□□□ -0.39
TRAPPC9-203ENST00000517667 ELMOD1Q8N336 334 aa12.64□□□□□ -0.39
TRAPPC9-203ENST00000517667 SPEM1Q8N4L4 309 aa12.64□□□□□ -0.39
TRAPPC9-203ENST00000517667 MCPH1Q8NEM0 835 aa12.64□□□□□ -0.39
TRAPPC9-203ENST00000517667 DEPDC1BQ8WUY9 529 aa12.64□□□□□ -0.39
TRAPPC9-203ENST00000517667 SMARCD2Q92925 531 aa12.64□□□□□ -0.39
TRAPPC9-203ENST00000517667 AIFM3Q96NN9 605 aa12.64□□□□□ -0.39
TRAPPC9-203ENST00000517667 ASB16Q96NS5 453 aa12.64□□□□□ -0.39
TRAPPC9-203ENST00000517667 CORO1BQ9BR76 489 aa12.64□□□□□ -0.39
TRAPPC9-203ENST00000517667 ZNF334Q9HCZ1 680 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC9-203ENST00000517667 PCDHA12Q9UN75 941 aa12.64□□□□□ -0.39
TRAPPC9-203ENST00000517667 KCNJ14Q9UNX9 436 aa12.64□□□□□ -0.39
TRAPPC9-203ENST00000517667 USO1O60763 962 aaKnown RBP12.63□□□□□ -0.39
TRAPPC9-203ENST00000517667 ABLIM3O94929 683 aa12.63□□□□□ -0.39
TRAPPC9-203ENST00000517667 PAPSS2O95340 614 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC9-203ENST00000517667 TKTP29401 623 aaKnown RBP12.63□□□□□ -0.39
TRAPPC9-203ENST00000517667 GDI1P31150 447 aa12.63□□□□□ -0.39
TRAPPC9-203ENST00000517667 CLCNKBP51801 687 aa12.63□□□□□ -0.39
TRAPPC9-203ENST00000517667 LIMK1P53667 647 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms