RNA–Protein interactions for RNA: ENST00000517400.5

LINC00534-201, long intergenic non-protein coding RNA 534, humanhuman

TSL 2 BASIC

Gene LINC00534, Length 793 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-201ENST00000517400 OR14K1Q8NGZ2 314 aa5.6□□□□□ -1.51
LINC00534-201ENST00000517400 DIS3LQ8TF46 1054 aaKnown RBP5.6□□□□□ -1.51
LINC00534-201ENST00000517400 ZNF480Q8WV37 535 aa5.6□□□□□ -1.51
LINC00534-201ENST00000517400 CFHR4Q92496 578 aa5.6□□□□□ -1.51
LINC00534-201ENST00000517400 C1GALT1C1Q96EU7 318 aa5.6□□□□□ -1.51
LINC00534-201ENST00000517400 MVB12AQ96EY5 273 aa5.6□□□□□ -1.51
LINC00534-201ENST00000517400 MAP3K14Q99558 947 aa5.6□□□□□ -1.51
LINC00534-201ENST00000517400 MSL2Q9HCI7 577 aa5.6□□□□□ -1.51
LINC00534-201ENST00000517400 PRDM11Q9NQV5 511 aa5.6□□□□□ -1.51
LINC00534-201ENST00000517400 OBP2AQ9NY56 170 aa5.6□□□□□ -1.51
LINC00534-201ENST00000517400 TRPS1Q9UHF7 1281 aa5.6□□□□□ -1.51
LINC00534-201ENST00000517400 CFAP20Q9Y6A4 193 aaKnown RBP5.6□□□□□ -1.51
LINC00534-201ENST00000517400 TET3O43151 1660 aa5.59□□□□□ -1.51
LINC00534-201ENST00000517400 NOS1P29475 1434 aa5.59□□□□□ -1.51
LINC00534-201ENST00000517400 NUP155O75694 1391 aa5.59□□□□□ -1.51
LINC00534-201ENST00000517400 VSTM5A8MXK1 200 aa5.59□□□□□ -1.51
LINC00534-201ENST00000517400 NRP1O14786 923 aa5.59□□□□□ -1.51
LINC00534-201ENST00000517400 SGTAO43765 313 aa5.59□□□□□ -1.51
LINC00534-201ENST00000517400 CNOT4O95628 575 aaKnown RBP5.59□□□□□ -1.51
LINC00534-201ENST00000517400 RPLP2P05387 115 aaKnown RBP5.59□□□□□ -1.51
LINC00534-201ENST00000517400 GYPEP15421 78 aa5.59□□□□□ -1.51
LINC00534-201ENST00000517400 GNALP38405 381 aa5.59□□□□□ -1.51
LINC00534-201ENST00000517400 SLC6A9P48067 706 aa5.59□□□□□ -1.51
LINC00534-201ENST00000517400 FXR1P51114 621 aaKnown RBP eCLIP5.59□□□□□ -1.51
LINC00534-201ENST00000517400 DUSP2Q05923 314 aa5.59□□□□□ -1.51
LINC00534-201ENST00000517400 IL10RAQ13651 578 aa5.59□□□□□ -1.51
LINC00534-201ENST00000517400 GBX1Q14549 363 aa5.59□□□□□ -1.51
LINC00534-201ENST00000517400 ZNF267Q14586 743 aaPredicted RBP5.59□□□□□ -1.51
LINC00534-201ENST00000517400 PLEKHH3Q7Z736 793 aa5.59□□□□□ -1.51
LINC00534-201ENST00000517400 DGKHQ86XP1 1220 aa5.59□□□□□ -1.51
LINC00534-201ENST00000517400 CMTM4Q8IZR5 234 aa5.59□□□□□ -1.51
LINC00534-201ENST00000517400 LILRA3Q8N6C8 439 aaPredicted RBP5.59□□□□□ -1.51
LINC00534-201ENST00000517400 CYFIP2Q96F07 1278 aa5.59□□□□□ -1.51
LINC00534-201ENST00000517400 MANSC1Q9H8J5 431 aa5.59□□□□□ -1.51
LINC00534-201ENST00000517400 C1orf112Q9NSG2 853 aa5.59□□□□□ -1.51
LINC00534-201ENST00000517400 GPRC5DQ9NZD1 345 aa5.59□□□□□ -1.51
LINC00534-201ENST00000517400 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.59□□□□□ -1.51
LINC00534-201ENST00000517400 PUF60Q9UHX1 559 aaKnown RBP5.59□□□□□ -1.51
LINC00534-201ENST00000517400 SIK3Q9Y2K2 1263 aa5.59□□□□□ -1.51
LINC00534-201ENST00000517400 PCDHA13Q9Y5I0 950 aa5.59□□□□□ -1.51
LINC00534-201ENST00000517400 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.59□□□□□ -1.51
LINC00534-201ENST00000517400 ASXL1Q8IXJ9 1541 aa5.58□□□□□ -1.52
LINC00534-201ENST00000517400 ZFYVE9O95405 1425 aa5.58□□□□□ -1.52
LINC00534-201ENST00000517400 MYO5BQ9ULV0 1848 aa5.58□□□□□ -1.52
LINC00534-201ENST00000517400 MATN2O00339 956 aa5.58□□□□□ -1.52
LINC00534-201ENST00000517400 SLC26A4O43511 780 aa5.58□□□□□ -1.52
LINC00534-201ENST00000517400 CTNND1O60716 968 aaKnown RBP5.58□□□□□ -1.52
LINC00534-201ENST00000517400 TRIM13O60858 407 aa5.58□□□□□ -1.52
LINC00534-201ENST00000517400 ITGA10O75578 1167 aa5.58□□□□□ -1.52
LINC00534-201ENST00000517400 SREBF1P36956 1147 aa5.58□□□□□ -1.52
LINC00534-201ENST00000517400 PER3P56645 1201 aa5.58□□□□□ -1.52
LINC00534-201ENST00000517400 RAC3P60763 192 aa5.58□□□□□ -1.52
LINC00534-201ENST00000517400 PPP2CBP62714 309 aa5.58□□□□□ -1.52
LINC00534-201ENST00000517400 PPP2CAP67775 309 aa5.58□□□□□ -1.52
LINC00534-201ENST00000517400 DSC2Q02487 901 aa5.58□□□□□ -1.52
LINC00534-201ENST00000517400 ACAP1Q15027 740 aa5.58□□□□□ -1.52
LINC00534-201ENST00000517400 SURF1Q15526 300 aa5.58□□□□□ -1.52
LINC00534-201ENST00000517400 ARHGAP29Q52LW3 1261 aa5.58□□□□□ -1.52
LINC00534-201ENST00000517400 TTC7BQ86TV6 843 aa5.58□□□□□ -1.52
LINC00534-201ENST00000517400 SIAH1Q8IUQ4 282 aa5.58□□□□□ -1.52
LINC00534-201ENST00000517400 RHOT1Q8IXI2 618 aa5.58□□□□□ -1.52
LINC00534-201ENST00000517400 GRAMD1CQ8IYS0 662 aa5.58□□□□□ -1.52
LINC00534-201ENST00000517400 ZDHHC14Q8IZN3 488 aa5.58□□□□□ -1.52
LINC00534-201ENST00000517400 GPHA2Q96T91 129 aa5.58□□□□□ -1.52
LINC00534-201ENST00000517400 ACO2Q99798 780 aaKnown RBP5.58□□□□□ -1.52
LINC00534-201ENST00000517400 ENKD1Q9H0I2 346 aa5.58□□□□□ -1.52
LINC00534-201ENST00000517400 SEC61A2Q9H9S3 476 aa5.58□□□□□ -1.52
LINC00534-201ENST00000517400 TRPC5Q9UL62 973 aaPredicted RBP5.58□□□□□ -1.52
LINC00534-201ENST00000517400 PCDHB1Q9Y5F3 818 aa5.58□□□□□ -1.52
LINC00534-201ENST00000517400 TRPM2O94759 1503 aa5.58□□□□□ -1.52
LINC00534-201ENST00000517400 PTPRUQ92729 1446 aa5.57□□□□□ -1.52
LINC00534-201ENST00000517400 PNPLA6Q8IY17 1366 aa5.57□□□□□ -1.52
LINC00534-201ENST00000517400 AHDC1Q5TGY3 1603 aaPredicted RBP5.57□□□□□ -1.52
LINC00534-201ENST00000517400 H3BML4 177 aa5.57□□□□□ -1.52
LINC00534-201ENST00000517400 SLC16A6O15403 523 aa5.57□□□□□ -1.52
LINC00534-201ENST00000517400 CAND2O75155 1236 aa5.57□□□□□ -1.52
LINC00534-201ENST00000517400 CDC42EP1Q00587 391 aa5.57□□□□□ -1.52
LINC00534-201ENST00000517400 THEMIS2Q5TEJ8 643 aa5.57□□□□□ -1.52
LINC00534-201ENST00000517400 KRT40Q6A162 431 aa5.57□□□□□ -1.52
LINC00534-201ENST00000517400 CCSAPQ6IQ19 270 aaPredicted RBP5.57□□□□□ -1.52
LINC00534-201ENST00000517400 ARHGEF18Q6ZSZ5 1173 aa5.57□□□□□ -1.52
LINC00534-201ENST00000517400 ADGRE4PQ86SQ3 457 aa5.57□□□□□ -1.52
LINC00534-201ENST00000517400 DRC7Q8IY82 874 aa5.57□□□□□ -1.52
LINC00534-201ENST00000517400 PQLC1Q8N2U9 271 aa5.57□□□□□ -1.52
LINC00534-201ENST00000517400 NSUN6Q8TEA1 469 aaKnown RBP5.57□□□□□ -1.52
LINC00534-201ENST00000517400 KAT5Q92993 513 aa5.57□□□□□ -1.52
LINC00534-201ENST00000517400 NEIL1Q96FI4 390 aaPredicted RBP5.57□□□□□ -1.52
LINC00534-201ENST00000517400 RPL10LQ96L21 214 aaKnown RBP5.57□□□□□ -1.52
LINC00534-201ENST00000517400 FAM193BQ96PV7 902 aaPredicted RBP5.57□□□□□ -1.52
LINC00534-201ENST00000517400 LMTK2Q8IWU2 1503 aa5.57□□□□□ -1.52
LINC00534-201ENST00000517400 ADAMTS13Q76LX8 1427 aa5.57□□□□□ -1.52
LINC00534-201ENST00000517400 SHPRHQ149N8 1683 aa5.56□□□□□ -1.52
LINC00534-201ENST00000517400 EP400Q96L91 3159 aa5.56□□□□□ -1.52
LINC00534-201ENST00000517400 CHD2O14647 1828 aaKnown RBP5.56□□□□□ -1.52
LINC00534-201ENST00000517400 GUCY1A2P33402 732 aa5.56□□□□□ -1.52
LINC00534-201ENST00000517400 EPHB4P54760 987 aa5.56□□□□□ -1.52
LINC00534-201ENST00000517400 SAFB2Q14151 953 aaKnown RBP eCLIP5.56□□□□□ -1.528e-7■■■□□ 16.3
LINC00534-201ENST00000517400 PDZD4Q76G19 769 aaPredicted RBP5.56□□□□□ -1.52
LINC00534-201ENST00000517400 SYT8Q8NBV8 401 aa5.56□□□□□ -1.52
LINC00534-201ENST00000517400 DMRTA2Q96SC8 542 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms