RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 HDGFL1Q5TGJ6 251 aa-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 B3GNTL1Q67FW5 361 aaPredicted RBP-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 NAPEPLDQ6IQ20 393 aa-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 FSTL4Q6MZW2 842 aa-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 CEP85Q6P2H3 762 aa-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 MORC1Q86VD1 984 aa-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 MAPKAPK5Q8IW41 473 aa-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 KIR2DL5BQ8NHK3 375 aa-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 DLG3Q92796 817 aa-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 SCMH1Q96GD3 660 aa-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 WNK4Q96J92 1243 aa-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 CHAMP1Q96JM3 812 aa-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 CDX2Q99626 313 aaPredicted RBP-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 LSM14BQ9BX40 385 aaKnown RBP-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 NKX2-4Q9H2Z4 354 aa-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 INCENPQ9NQS7 918 aa-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 DIAPH3Q9NSV4 1193 aa-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 TMEM248Q9NWD8 314 aa-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 ATP11BQ9Y2G3 1177 aa-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 FRMPD2Q68DX3 1309 aaPredicted RBP-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 COL5A2P05997 1499 aaPredicted RBP-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 IGLV5-39A0A0G2JS06 123 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 A0A1W2PPI3 338 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 ZNF814B7Z6K7 855 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 ADM5C9JUS6 153 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 PODXLO00592 558 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 DSCR3O14972 297 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 FAM13AO94988 1023 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 SYF2O95926 243 aaKnown RBP-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 IGKV3-15P01624 115 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 ELANEP08246 267 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 RBP3P10745 1247 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 EN2P19622 333 aaPredicted RBP-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 DRD3P35462 400 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 MLH1P40692 756 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 CCT8P50990 548 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 HSD17B4P51659 736 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 SLC8A3P57103 927 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 CXADRP78310 365 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 GHRHRQ02643 423 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 ZNF91Q05481 1191 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 EEF1A2Q05639 463 aaKnown RBP-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 CKAP4Q07065 602 aaKnown RBP-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 DBPQ10586 325 aaPredicted RBP-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 GRIK2Q13002 908 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 RIGQ13278 110 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 SF3B3Q15393 1217 aaKnown RBP-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 KRTAP21-1Q3LI58 79 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 WASHC2DQ5SRD0 308 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 FAM102AQ5T9C2 384 aaPredicted RBP-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 ICE2Q659A1 982 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 B4GALNT4Q76KP1 1039 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 SV2BQ7L1I2 683 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 XYLT1Q86Y38 959 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 SUGP2Q8IX01 1082 aaKnown RBP eCLIP-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 WWC1Q8IX03 1113 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 BCL6BQ8N143 479 aaPredicted RBP-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 LMNTD1Q8N9Z9 388 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 TAS1R2Q8TE23 839 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 RUNDC1Q96C34 613 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 RTP4Q96DX8 246 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 PPP1R13BQ96KQ4 1090 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 PGLYRP2Q96PD5 576 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 ASB2Q96Q27 587 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 ACO2Q99798 780 aaKnown RBP-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 TRIM55Q9BYV6 548 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 CDT1Q9H211 546 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 GALNT8Q9NY28 637 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 UTS2RQ9UKP6 389 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 SCAF8Q9UPN6 1271 aaKnown RBP-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 CLCA2Q9UQC9 943 aa-0.45□□□□□ -2.48
SNORA40.16-201ENST00000517238 KIR2DS1A0A191URI9 304 aa-0.46□□□□□ -2.48
SNORA40.16-201ENST00000517238 PLSCR5A0PG75 271 aa-0.46□□□□□ -2.48
SNORA40.16-201ENST00000517238 HMX3A6NHT5 357 aa-0.46□□□□□ -2.48
SNORA40.16-201ENST00000517238 KRTAP16-1A8MUX0 517 aa-0.46□□□□□ -2.48
SNORA40.16-201ENST00000517238 C9IYK1 514 aa-0.46□□□□□ -2.48
SNORA40.16-201ENST00000517238 H7BY64 318 aa-0.46□□□□□ -2.48
SNORA40.16-201ENST00000517238 TCEA3O75764 348 aa-0.46□□□□□ -2.48
SNORA40.16-201ENST00000517238 TTLL1O95922 423 aa-0.46□□□□□ -2.48
SNORA40.16-201ENST00000517238 P0C879 139 aa-0.46□□□□□ -2.48
SNORA40.16-201ENST00000517238 CD247P20963 164 aa-0.46□□□□□ -2.48
SNORA40.16-201ENST00000517238 PTGS1P23219 599 aa-0.46□□□□□ -2.48
SNORA40.16-201ENST00000517238 ANOS1P23352 680 aa-0.46□□□□□ -2.48
SNORA40.16-201ENST00000517238 MGAT1P26572 445 aa-0.46□□□□□ -2.48
SNORA40.16-201ENST00000517238 NDUFV1P49821 464 aa-0.46□□□□□ -2.48
SNORA40.16-201ENST00000517238 CLCN5P51795 746 aa-0.46□□□□□ -2.48
SNORA40.16-201ENST00000517238 AMPD2Q01433 879 aa-0.46□□□□□ -2.48
SNORA40.16-201ENST00000517238 KIR2DS1Q14954 304 aa-0.46□□□□□ -2.48
SNORA40.16-201ENST00000517238 PRTGQ2VWP7 1150 aa-0.46□□□□□ -2.48
SNORA40.16-201ENST00000517238 TDRD10Q5VZ19 366 aaKnown RBP-0.46□□□□□ -2.48
SNORA40.16-201ENST00000517238 KANK2Q63ZY3 851 aa-0.46□□□□□ -2.48
SNORA40.16-201ENST00000517238 OVOS1Q6IE37 1185 aa-0.46□□□□□ -2.48
SNORA40.16-201ENST00000517238 LIN28BQ6ZN17 250 aaKnown RBP eCLIP-0.46□□□□□ -2.48
SNORA40.16-201ENST00000517238 AGMOQ6ZNB7 445 aa-0.46□□□□□ -2.48
SNORA40.16-201ENST00000517238 DOK3Q7L591 496 aa-0.46□□□□□ -2.48
SNORA40.16-201ENST00000517238 TAS1R1Q7RTX1 841 aa-0.46□□□□□ -2.48
SNORA40.16-201ENST00000517238 PNPLA5Q7Z6Z6 429 aaPredicted RBP-0.46□□□□□ -2.48
SNORA40.16-201ENST00000517238 ANKRD13BQ86YJ7 626 aa-0.46□□□□□ -2.48
SNORA40.16-201ENST00000517238 IFNL3Q8IZI9 196 aa-0.46□□□□□ -2.48
SNORA40.16-201ENST00000517238 MMP21Q8N119 569 aa-0.46□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms