RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 CBWD2Q8IUF1 395 aa5.9□□□□□ -1.46
SCARNA16.4-201ENST00000516956 BRSK2Q8IWQ3 736 aa5.9□□□□□ -1.46
SCARNA16.4-201ENST00000516956 AOPEPQ8N6M6 819 aa5.9□□□□□ -1.46
SCARNA16.4-201ENST00000516956 CEP120Q8N960 986 aa5.9□□□□□ -1.46
SCARNA16.4-201ENST00000516956 ENOX1Q8TC92 643 aaKnown RBP5.9□□□□□ -1.46
SCARNA16.4-201ENST00000516956 TMC2Q8TDI7 906 aa5.9□□□□□ -1.46
SCARNA16.4-201ENST00000516956 MICAL1Q8TDZ2 1067 aa5.9□□□□□ -1.46
SCARNA16.4-201ENST00000516956 TMEM169Q96HH4 297 aa5.9□□□□□ -1.46
SCARNA16.4-201ENST00000516956 SNX27Q96L92 541 aa5.9□□□□□ -1.46
SCARNA16.4-201ENST00000516956 PCMTD1Q96MG8 357 aaPredicted RBP5.9□□□□□ -1.46
SCARNA16.4-201ENST00000516956 ZFP42Q96MM3 310 aa5.9□□□□□ -1.46
SCARNA16.4-201ENST00000516956 ZNF560Q96MR9 790 aa5.9□□□□□ -1.46
SCARNA16.4-201ENST00000516956 TGS1Q96RS0 853 aaKnown RBP5.9□□□□□ -1.46
SCARNA16.4-201ENST00000516956 TMEM175Q9BSA9 504 aa5.9□□□□□ -1.46
SCARNA16.4-201ENST00000516956 IKZF4Q9H2S9 585 aa5.9□□□□□ -1.46
SCARNA16.4-201ENST00000516956 THAP9Q9H5L6 903 aa5.9□□□□□ -1.46
SCARNA16.4-201ENST00000516956 MMRN2Q9H8L6 949 aa5.9□□□□□ -1.46
SCARNA16.4-201ENST00000516956 DPP3Q9NY33 737 aa5.9□□□□□ -1.46
SCARNA16.4-201ENST00000516956 SPG21Q9NZD8 308 aa5.9□□□□□ -1.46
SCARNA16.4-201ENST00000516956 PCDH10Q9P2E7 1040 aa5.9□□□□□ -1.46
SCARNA16.4-201ENST00000516956 COLQQ9Y215 455 aaPredicted RBP5.9□□□□□ -1.46
SCARNA16.4-201ENST00000516956 NFE2L3Q9Y4A8 694 aa5.9□□□□□ -1.46
SCARNA16.4-201ENST00000516956 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.9□□□□□ -1.46
SCARNA16.4-201ENST00000516956 TTC26A0AVF1 554 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 CASTOR2A6NHX0 329 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 GRXCR1A8MXD5 290 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 KCNJ18B7U540 433 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 IKBKBO14920 756 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 B3GAT3O94766 335 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 SERPINC1P01008 464 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 RB1P06400 928 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 CA3P07451 260 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 CYP3A5P20815 502 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 BMP6P22004 513 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 DNAJB2P25686 324 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 EEF1GP26641 437 aaKnown RBP5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 HOXD13P35453 343 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 PIK3CAP42336 1068 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 GATMP50440 423 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 BCAR1P56945 870 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 PLCB2Q00722 1185 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ELAVL2Q12926 359 aaKnown RBP5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 BFSP1Q12934 665 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 KCNJ12Q14500 433 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 SLC10A6Q3KNW5 377 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 SV2CQ496J9 727 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 CLLU1OSQ5K130 101 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ZNF697Q5TEC3 545 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 RASIP1Q5U651 963 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 TTI2Q6NXR4 508 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 DCLRE1AQ6PJP8 1040 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 KCNT2Q6UVM3 1135 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 METTL23Q86XA0 190 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 WDR49Q8IV35 697 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 TMEM192Q8IY95 271 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 FBXO22Q8NEZ5 403 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 PPP2R3CQ969Q6 453 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 TIFAQ96CG3 184 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 EEF2KMTQ96G04 330 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 CNOT6LQ96LI5 555 aaKnown RBP5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 MFSD14AQ96MC6 490 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 CASD1Q96PB1 797 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 CGRRF1Q99675 332 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 BPIFA3Q9BQP9 254 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 C11orf84Q9BUA3 381 aaPredicted RBP5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 NKX2-4Q9H2Z4 354 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 PDE11AQ9HCR9 933 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 TBC1D13Q9NVG8 400 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 DMAC2Q9NW81 257 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 CNTN3Q9P232 1028 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ITGA11Q9UKX5 1188 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 MTUS1Q9ULD2 1270 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 AGAP1Q9UPQ3 857 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 SSX2IPQ9Y2D8 614 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 PRG3Q9Y2Y8 225 aaPredicted RBP5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 C2CD2Q9Y426 696 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ALPK3Q96L96 1907 aa5.89□□□□□ -1.47
SCARNA16.4-201ENST00000516956 LTBP2Q14767 1821 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 SCN5AQ14524 2016 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 MEIS3P2A8K0S8 358 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 PODXLO00592 558 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ABLIM1O14639 778 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 CBFA2T2O43439 604 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 HUS1O60921 280 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 AKAP3O75969 853 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 AFPP02771 609 aaKnown RBP5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 NFICP08651 508 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 GTF2H1P32780 548 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 BMPR1AP36894 532 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 CASP4P49662 377 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 TAF6P49848 677 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 MXI1P50539 228 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 PMS1P54277 932 aaKnown RBP5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 TNNC1P63316 161 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 HTRA4P83105 476 aaPredicted RBP5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ENPEPQ07075 957 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 GPM6BQ13491 265 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 PTPROQ16827 1216 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 LRIT3Q3SXY7 679 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ZCWPW2Q504Y3 356 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms