RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 VCPKMTQ9H867 229 aa3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 ATP6V0A4Q9HBG4 840 aa3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 ZFP14Q9HCL3 533 aa3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 PKD2L1Q9P0L9 805 aa3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 MAP3K2Q9Y2U5 619 aa3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 HERC1Q15751 4861 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 MEIS1O00470 390 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 TEX28O15482 410 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 GAS2O43903 313 aaKnown RBP3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 PDE8BO95263 885 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 MT-CO3P00414 261 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 HLA-DOAP06340 250 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 CHRM1P11229 460 aaPredicted RBP3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 ZSCAN20P17040 1043 aaPredicted RBP3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 FGFR2P21802 821 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 RBMS1P29558 406 aaKnown RBP3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 TMPOP42166 694 aaKnown RBP3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 RIPK4P57078 832 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 ADAM8P78325 824 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 INSM1Q01101 510 aaPredicted RBP3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 RPL6Q02878 288 aaKnown RBP3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 MECOMQ03112 1051 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 CNGB1Q14028 1251 aaPredicted RBP3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 FSTL4Q6MZW2 842 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 ATF7IPQ6VMQ6 1270 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 CATIPQ7Z7H3 387 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 PALB2Q86YC2 1186 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 SIAH1Q8IUQ4 282 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 MAPKAPK5Q8IW41 473 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 RGL4Q8IZJ4 473 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 ANKRD44Q8N8A2 993 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 ZSCAN1Q8NBB4 408 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 FAM174AQ8TBP5 190 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 RFFLQ8WZ73 363 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 TMEM209Q96SK2 561 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 C19orf24Q9BVV8 132 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 TMX1Q9H3N1 280 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 RNPEPQ9H4A4 650 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 ACAD9Q9H845 621 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 MRS2Q9HD23 443 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 MRPL17Q9NRX2 175 aaKnown RBP3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 GDE1Q9NZC3 331 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 PADI3Q9ULW8 664 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 POLIQ9UNA4 740 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 TMX2Q9Y320 296 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 CTDP1Q9Y5B0 961 aaPredicted RBP3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 BAZ2BQ9UIF8 2168 aaKnown RBP3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 NAV1Q8NEY1 1877 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 ABCA13Q86UQ4 5058 aa3.77□□□□□ -1.81
SCARNA13-201ENST00000516672 FLT1P17948 1338 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 RBMY1BA6NDE4 496 aaKnown RBP3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 RBMY1EA6NEQ0 496 aaKnown RBP3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 H3BM21 787 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 CHL1O00533 1208 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 ZBTB22O15209 634 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 MGEA5O60502 916 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 JAK2O60674 1132 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 ZBED4O75132 1171 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 CRLF1O75462 422 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 EGFP01133 1207 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 GH1P01241 217 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 IFNA2P01563 188 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 POLR3DP05423 398 aaPredicted RBP3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 HOXB7P09629 217 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 IFIT1P09914 478 aaKnown RBP3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 RBMY1DP0C7P1 496 aaKnown RBP3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 SMIM10L2AP0DMW4 78 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 SMIM10L2BP0DMW5 78 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 PRKCSHP14314 528 aaPredicted RBP3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 GNSP15586 552 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 ALDH5A1P51649 535 aaPredicted RBP3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 AK2P54819 239 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 TLE4Q04727 773 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 GRSF1Q12849 480 aaKnown RBP eCLIP3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 TGIF1Q15583 401 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 MAP7D1Q3KQU3 841 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 FAM78AQ5JUQ0 283 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 FAM83BQ5T0W9 1011 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 AXDND1Q5T1B0 1012 aaPredicted RBP3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 NCCRP1Q6ZVX7 275 aaPredicted RBP3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 SLC41A1Q8IVJ1 513 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 ZNF276Q8N554 614 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 TGFBRAP1Q8WUH2 860 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 DEPDC1BQ8WUY9 529 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 LENG9Q96B70 501 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 ZBTB10Q96DT7 871 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 ABHD17AQ96GS6 310 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 IGSF21Q96ID5 467 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 TMEM87BQ96K49 555 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 CNDP2Q96KP4 475 aaKnown RBP3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 SLF1Q9BQI6 1058 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 PDCD2LQ9BRP1 358 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 MFRPQ9BY79 579 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 FAM124BQ9H5Z6 455 aaPredicted RBP3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 HCFC1R1Q9NWW0 138 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 SUSD2Q9UGT4 822 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 KCNH3Q9ULD8 1083 aa3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 MRPS23Q9Y3D9 190 aaKnown RBP3.76□□□□□ -1.81
SCARNA13-201ENST00000516672 MAP4K5Q9Y4K4 846 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms