RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 CALML4Q96GE6 196 aa9.09□□□□□ -0.95
SFXN1-211ENST00000515736 PIGSQ96S52 555 aa9.09□□□□□ -0.95
SFXN1-211ENST00000515736 RNF208Q9H0X6 261 aa9.09□□□□□ -0.95
SFXN1-211ENST00000515736 PIDD1Q9HB75 910 aa9.09□□□□□ -0.95
SFXN1-211ENST00000515736 TNPO3Q9Y5L0 923 aaKnown RBP9.09□□□□□ -0.95
SFXN1-211ENST00000515736 ATAD5Q96QE3 1844 aa9.09□□□□□ -0.95
SFXN1-211ENST00000515736 KDM3AQ9Y4C1 1321 aa9.08□□□□□ -0.96
SFXN1-211ENST00000515736 CCL15-CCL14A0A0B4J2E2 113 aa9.08□□□□□ -0.96
SFXN1-211ENST00000515736 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.08□□□□□ -0.96
SFXN1-211ENST00000515736 BICDL2A1A5D9 508 aa9.08□□□□□ -0.96
SFXN1-211ENST00000515736 PSMA7O14818 248 aa9.08□□□□□ -0.96
SFXN1-211ENST00000515736 ZSCAN12O43309 604 aa9.08□□□□□ -0.96
SFXN1-211ENST00000515736 RNGTTO60942 597 aaKnown RBP9.08□□□□□ -0.96
SFXN1-211ENST00000515736 LRIG2O94898 1065 aa9.08□□□□□ -0.96
SFXN1-211ENST00000515736 RHOBTB3O94955 611 aa9.08□□□□□ -0.96
SFXN1-211ENST00000515736 FOSP01100 380 aaPredicted RBP9.08□□□□□ -0.96
SFXN1-211ENST00000515736 ITGA4P13612 1032 aa9.08□□□□□ -0.96
SFXN1-211ENST00000515736 USP11P51784 963 aa9.08□□□□□ -0.96
SFXN1-211ENST00000515736 GTF2A2P52657 109 aa9.08□□□□□ -0.96
SFXN1-211ENST00000515736 LRMPQ12912 555 aa9.08□□□□□ -0.96
SFXN1-211ENST00000515736 TBX2Q13207 712 aaPredicted RBP9.08□□□□□ -0.96
SFXN1-211ENST00000515736 NR1I3Q14994 352 aa9.08□□□□□ -0.96
SFXN1-211ENST00000515736 ARHGEF6Q15052 776 aa9.08□□□□□ -0.96
SFXN1-211ENST00000515736 PCBP1Q15365 356 aaKnown RBP eCLIP9.08□□□□□ -0.96
SFXN1-211ENST00000515736 PTPN14Q15678 1187 aa9.08□□□□□ -0.96
SFXN1-211ENST00000515736 CCL15Q16663 113 aa9.08□□□□□ -0.96
SFXN1-211ENST00000515736 TPD52L1Q16890 204 aaPredicted RBP9.08□□□□□ -0.96
SFXN1-211ENST00000515736 SLC4A8Q2Y0W8 1093 aa9.08□□□□□ -0.96
SFXN1-211ENST00000515736 CERKLQ49MI3 558 aaPredicted RBP9.08□□□□□ -0.96
SFXN1-211ENST00000515736 POMZP3Q6PJE2 187 aa9.08□□□□□ -0.96
SFXN1-211ENST00000515736 DYMQ7RTS9 669 aa9.08□□□□□ -0.96
SFXN1-211ENST00000515736 FGD2Q7Z6J4 655 aa9.08□□□□□ -0.96
SFXN1-211ENST00000515736 CABP7Q86V35 215 aa9.08□□□□□ -0.96
SFXN1-211ENST00000515736 FAM114A1Q8IWE2 563 aa9.08□□□□□ -0.96
SFXN1-211ENST00000515736 CCAR2Q8N163 923 aaKnown RBP9.08□□□□□ -0.96
SFXN1-211ENST00000515736 ADCY4Q8NFM4 1077 aa9.08□□□□□ -0.96
SFXN1-211ENST00000515736 RASSF8Q8NHQ8 419 aa9.08□□□□□ -0.96
SFXN1-211ENST00000515736 DNAJB8Q8NHS0 232 aa9.08□□□□□ -0.96
SFXN1-211ENST00000515736 DHTKD1Q96HY7 919 aaPredicted RBP9.08□□□□□ -0.96
SFXN1-211ENST00000515736 KREMEN1Q96MU8 473 aa9.08□□□□□ -0.96
SFXN1-211ENST00000515736 PTPN18Q99952 460 aa9.08□□□□□ -0.96
SFXN1-211ENST00000515736 ASPSCR1Q9BZE9 553 aa9.08□□□□□ -0.96
SFXN1-211ENST00000515736 TMEM39BQ9GZU3 492 aa9.08□□□□□ -0.96
SFXN1-211ENST00000515736 LIMA1Q9UHB6 759 aaKnown RBP9.08□□□□□ -0.96
SFXN1-211ENST00000515736 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.08□□□□□ -0.961e-7■□□□□ 10
SFXN1-211ENST00000515736 ZSWIM8A7E2V4 1837 aa9.08□□□□□ -0.96
SFXN1-211ENST00000515736 ABCB11O95342 1321 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 PVALEFA0A1B0GWK0 134 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 TBX3O15119 743 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 CCNT1O60563 726 aaKnown RBP9.07□□□□□ -0.96
SFXN1-211ENST00000515736 KATNA1O75449 491 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 TIAF1O95411 115 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 ASLP04424 464 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 GOLGA8HP0CJ92 632 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 ATP1A3P13637 1013 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 TNNT1P13805 278 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 DRD2P14416 443 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 EEF1GP26641 437 aaKnown RBP9.07□□□□□ -0.96
SFXN1-211ENST00000515736 AFMP43652 599 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 ASPAP45381 313 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 CACNB3P54284 484 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 RNF4P78317 190 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 KRT76Q01546 638 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 STRN3Q13033 797 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 VGLL4Q14135 290 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 DHCR24Q15392 516 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 IL17AQ16552 155 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 CALCRLQ16602 461 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 LETM2Q2VYF4 491 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 ARMCX5Q6P1M9 558 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 PKN3Q6P5Z2 889 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 BTNL9Q6UXG8 535 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.07□□□□□ -0.96
SFXN1-211ENST00000515736 ARMCX6Q7L4S7 300 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 NECAB2Q7Z6G3 386 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 CNGA4Q8IV77 575 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 ADGRF4Q8IZF3 695 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 KIF18AQ8NI77 898 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 TBCKQ8TEA7 893 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 MTMR9Q96QG7 549 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 PANX2Q96RD6 677 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 C7orf25Q9BPX7 421 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 NT5C3AQ9H0P0 336 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 THAP9Q9H5L6 903 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 SH2D4AQ9H788 454 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 JMJD4Q9H9V9 463 aa9.07□□□□□ -0.96
SFXN1-211ENST00000515736 SSU72Q9NP77 194 aaKnown RBP9.07□□□□□ -0.96
SFXN1-211ENST00000515736 CGGBP1Q9UFW8 167 aaPredicted RBP9.07□□□□□ -0.96
SFXN1-211ENST00000515736 CYP3A7-CYP3A51PA0A087WV96 503 aa9.06□□□□□ -0.96
SFXN1-211ENST00000515736 A0A087WWV3 80 aa9.06□□□□□ -0.96
SFXN1-211ENST00000515736 KRBA1A5PL33 1030 aa9.06□□□□□ -0.96
SFXN1-211ENST00000515736 MPHOSPH10O00566 681 aaKnown RBP9.06□□□□□ -0.96
SFXN1-211ENST00000515736 RRP9O43818 475 aaKnown RBP9.06□□□□□ -0.96
SFXN1-211ENST00000515736 OPA1O60313 960 aa9.06□□□□□ -0.96
SFXN1-211ENST00000515736 PLA2G6O60733 806 aa9.06□□□□□ -0.96
SFXN1-211ENST00000515736 RASGRP1O95267 797 aa9.06□□□□□ -0.96
SFXN1-211ENST00000515736 FGFR1OPO95684 399 aaKnown RBP9.06□□□□□ -0.96
SFXN1-211ENST00000515736 EN2P19622 333 aaPredicted RBP9.06□□□□□ -0.96
SFXN1-211ENST00000515736 CYP3A7P24462 503 aa9.06□□□□□ -0.96
SFXN1-211ENST00000515736 SLC1A4P43007 532 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms