RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 DNAJB4Q9UDY4 337 aa12.93□□□□□ -0.34
SNF8-215ENST00000515572 FAN1Q9Y2M0 1017 aa12.93□□□□□ -0.34
SNF8-215ENST00000515572 C2CD2Q9Y426 696 aa12.93□□□□□ -0.34
SNF8-215ENST00000515572 GOLGA8IPA6NC78 632 aa12.92□□□□□ -0.34
SNF8-215ENST00000515572 GOLGA8JA6NMD2 632 aa12.92□□□□□ -0.34
SNF8-215ENST00000515572 NRP1O14786 923 aa12.92□□□□□ -0.34
SNF8-215ENST00000515572 B4GALT3O60512 393 aa12.92□□□□□ -0.34
SNF8-215ENST00000515572 FGF18O76093 207 aa12.92□□□□□ -0.34
SNF8-215ENST00000515572 CYP3A5P20815 502 aa12.92□□□□□ -0.34
SNF8-215ENST00000515572 NR2F2P24468 414 aa12.92□□□□□ -0.34
SNF8-215ENST00000515572 OR1G1P47890 313 aa12.92□□□□□ -0.34
SNF8-215ENST00000515572 PLCB3Q01970 1234 aa12.92□□□□□ -0.34
SNF8-215ENST00000515572 LRRC63Q05C16 580 aa12.92□□□□□ -0.34
SNF8-215ENST00000515572 TMEM132DQ14C87 1099 aa12.92□□□□□ -0.34
SNF8-215ENST00000515572 ZBTB6Q15916 424 aa12.92□□□□□ -0.34
SNF8-215ENST00000515572 CCDC183Q5T5S1 534 aa12.92□□□□□ -0.34
SNF8-215ENST00000515572 RBM43Q6ZSC3 357 aaKnown RBP12.92□□□□□ -0.34
SNF8-215ENST00000515572 Q7L0L9 218 aa12.92□□□□□ -0.34
SNF8-215ENST00000515572 CBWD2Q8IUF1 395 aa12.92□□□□□ -0.34
SNF8-215ENST00000515572 MLKLQ8NB16 471 aa12.92□□□□□ -0.34
SNF8-215ENST00000515572 NOC3LQ8WTT2 800 aaKnown RBP12.92□□□□□ -0.34
SNF8-215ENST00000515572 FAM212AQ96EL1 285 aa12.92□□□□□ -0.34
SNF8-215ENST00000515572 TMEM169Q96HH4 297 aa12.92□□□□□ -0.34
SNF8-215ENST00000515572 FAM161BQ96MY7 647 aa12.92□□□□□ -0.34
SNF8-215ENST00000515572 GAS2L1Q99501 681 aaPredicted RBP12.92□□□□□ -0.34
SNF8-215ENST00000515572 LMAN2LQ9H0V9 348 aa12.92□□□□□ -0.34
SNF8-215ENST00000515572 PRDM12Q9H4Q4 367 aa12.92□□□□□ -0.34
SNF8-215ENST00000515572 PUF60Q9UHX1 559 aaKnown RBP12.92□□□□□ -0.34
SNF8-215ENST00000515572 UBQLN1Q9UMX0 589 aaKnown RBP12.92□□□□□ -0.34
SNF8-215ENST00000515572 LZTS1Q9Y250 596 aa12.92□□□□□ -0.34
SNF8-215ENST00000515572 FRMD4BQ9Y2L6 1034 aa12.92□□□□□ -0.34
SNF8-215ENST00000515572 BICDL2A1A5D9 508 aa12.91□□□□□ -0.34
SNF8-215ENST00000515572 EPOPA6NHQ4 379 aa12.91□□□□□ -0.34
SNF8-215ENST00000515572 CASTOR2A6NHX0 329 aa12.91□□□□□ -0.34
SNF8-215ENST00000515572 PPP1R3GB7ZBB8 358 aa12.91□□□□□ -0.34
SNF8-215ENST00000515572 TMEM189-UBE2V1I3L0A0 370 aa12.91□□□□□ -0.34
SNF8-215ENST00000515572 MAPK13O15264 365 aa12.91□□□□□ -0.34
SNF8-215ENST00000515572 ITGB1P05556 798 aa12.91□□□□□ -0.34
SNF8-215ENST00000515572 CCNE1P24864 410 aa12.91□□□□□ -0.34
SNF8-215ENST00000515572 RPL9P32969 192 aaKnown RBP12.91□□□□□ -0.34
SNF8-215ENST00000515572 PBX3P40426 434 aa12.91□□□□□ -0.34
SNF8-215ENST00000515572 PTPROQ16827 1216 aa12.91□□□□□ -0.34
SNF8-215ENST00000515572 KLHL40Q2TBA0 621 aa12.91□□□□□ -0.34
SNF8-215ENST00000515572 JADE1Q6IE81 842 aa12.91□□□□□ -0.34
SNF8-215ENST00000515572 BEST2Q8NFU1 509 aa12.91□□□□□ -0.34
SNF8-215ENST00000515572 GDPD5Q8WTR4 605 aa12.91□□□□□ -0.34
SNF8-215ENST00000515572 IGSF21Q96ID5 467 aa12.91□□□□□ -0.34
SNF8-215ENST00000515572 MTMR10Q9NXD2 777 aa12.91□□□□□ -0.34
SNF8-215ENST00000515572 LMCD1Q9NZU5 365 aa12.91□□□□□ -0.34
SNF8-215ENST00000515572 DACH1Q9UI36 760 aa12.91□□□□□ -0.34
SNF8-215ENST00000515572 MYO9BQ13459 2157 aa12.91□□□□□ -0.34
SNF8-215ENST00000515572 ATG2AQ2TAZ0 1938 aa12.9□□□□□ -0.34
SNF8-215ENST00000515572 LPXNO60711 386 aa12.9□□□□□ -0.34
SNF8-215ENST00000515572 NFICP08651 508 aa12.9□□□□□ -0.34
SNF8-215ENST00000515572 CD44P16070 742 aaKnown RBP12.9□□□□□ -0.34
SNF8-215ENST00000515572 POU3F3P20264 500 aaPredicted RBP12.9□□□□□ -0.34
SNF8-215ENST00000515572 LRPAP1P30533 357 aa12.9□□□□□ -0.34
SNF8-215ENST00000515572 FKBP3Q00688 224 aaKnown RBP12.9□□□□□ -0.34
SNF8-215ENST00000515572 SOX4Q06945 474 aaPredicted RBP12.9□□□□□ -0.34
SNF8-215ENST00000515572 SPAG1Q07617 926 aa12.9□□□□□ -0.34
SNF8-215ENST00000515572 CYP24A1Q07973 514 aa12.9□□□□□ -0.34
SNF8-215ENST00000515572 PAK1Q13153 545 aa12.9□□□□□ -0.34
SNF8-215ENST00000515572 ADAM9Q13443 819 aa12.9□□□□□ -0.34
SNF8-215ENST00000515572 PSMD6Q15008 389 aa12.9□□□□□ -0.34
SNF8-215ENST00000515572 UPP1Q16831 310 aa12.9□□□□□ -0.34
SNF8-215ENST00000515572 SKOR2Q2VWA4 1001 aaPredicted RBP12.9□□□□□ -0.34
SNF8-215ENST00000515572 SPATA1Q5VX52 437 aa12.9□□□□□ -0.34
SNF8-215ENST00000515572 CEP135Q66GS9 1140 aa12.9□□□□□ -0.34
SNF8-215ENST00000515572 ANKRD40Q6AI12 368 aa12.9□□□□□ -0.34
SNF8-215ENST00000515572 KLHL10Q6JEL2 608 aa12.9□□□□□ -0.34
SNF8-215ENST00000515572 PDE12Q6L8Q7 609 aaKnown RBP12.9□□□□□ -0.34
SNF8-215ENST00000515572 DCLRE1AQ6PJP8 1040 aa12.9□□□□□ -0.34
SNF8-215ENST00000515572 USP37Q86T82 979 aa12.9□□□□□ -0.34
SNF8-215ENST00000515572 DDX53Q86TM3 631 aaKnown RBP12.9□□□□□ -0.34
SNF8-215ENST00000515572 RDH13Q8NBN7 331 aa12.9□□□□□ -0.34
SNF8-215ENST00000515572 ZSWIM2Q8NEG5 633 aa12.9□□□□□ -0.34
SNF8-215ENST00000515572 SPPL3Q8TCT6 385 aa12.9□□□□□ -0.34
SNF8-215ENST00000515572 CACTINQ8WUQ7 758 aaKnown RBP12.9□□□□□ -0.34
SNF8-215ENST00000515572 NELFBQ8WX92 580 aa12.9□□□□□ -0.34
SNF8-215ENST00000515572 C18orf25Q96B23 403 aaPredicted RBP12.9□□□□□ -0.34
SNF8-215ENST00000515572 MFSD14AQ96MC6 490 aa12.9□□□□□ -0.34
SNF8-215ENST00000515572 CDX2Q99626 313 aaPredicted RBP12.9□□□□□ -0.34
SNF8-215ENST00000515572 MKNK1Q9BUB5 465 aa12.9□□□□□ -0.34
SNF8-215ENST00000515572 PDE11AQ9HCR9 933 aa12.9□□□□□ -0.34
SNF8-215ENST00000515572 ALG13Q9NP73 1137 aaKnown RBP12.9□□□□□ -0.34
SNF8-215ENST00000515572 ADAM28Q9UKQ2 775 aa12.9□□□□□ -0.34
SNF8-215ENST00000515572 PRG3Q9Y2Y8 225 aaPredicted RBP12.9□□□□□ -0.34
SNF8-215ENST00000515572 LAMA3Q16787 3333 aa12.9□□□□□ -0.34
SNF8-215ENST00000515572 SF3B1O75533 1304 aaKnown RBP eCLIP12.89□□□□□ -0.35
SNF8-215ENST00000515572 NT5C1B-RDH14C9J2C7 533 aa12.89□□□□□ -0.35
SNF8-215ENST00000515572 CETN3O15182 167 aa12.89□□□□□ -0.35
SNF8-215ENST00000515572 GRM6O15303 877 aa12.89□□□□□ -0.35
SNF8-215ENST00000515572 TADA2AO75478 443 aa12.89□□□□□ -0.35
SNF8-215ENST00000515572 B3GAT3O94766 335 aa12.89□□□□□ -0.35
SNF8-215ENST00000515572 KIF4AO95239 1232 aa12.89□□□□□ -0.35
SNF8-215ENST00000515572 PAX3P23760 479 aa12.89□□□□□ -0.35
SNF8-215ENST00000515572 PSMC2P35998 433 aaKnown RBP12.89□□□□□ -0.35
SNF8-215ENST00000515572 CLCNKBP51801 687 aa12.89□□□□□ -0.35
SNF8-215ENST00000515572 NLRP12P59046 1061 aa12.89□□□□□ -0.35
SNF8-215ENST00000515572 ENPEPQ07075 957 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms