RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 TM6SF1Q9BZW5 370 aa9.91□□□□□ -0.82
CDC42SE2-212ENST00000515533 SMOC2Q9H3U7 446 aa9.91□□□□□ -0.82
CDC42SE2-212ENST00000515533 DHX33Q9H6R0 707 aaKnown RBP9.91□□□□□ -0.82
CDC42SE2-212ENST00000515533 KCNMB3Q9NPA1 279 aa9.91□□□□□ -0.82
CDC42SE2-212ENST00000515533 UBN1Q9NPG3 1134 aa9.91□□□□□ -0.82
CDC42SE2-212ENST00000515533 DPP7Q9UHL4 492 aa9.91□□□□□ -0.82
CDC42SE2-212ENST00000515533 VAV3Q9UKW4 847 aa9.91□□□□□ -0.82
CDC42SE2-212ENST00000515533 SSX2IPQ9Y2D8 614 aa9.91□□□□□ -0.82
CDC42SE2-212ENST00000515533 VWA8A3KMH1 1905 aa9.91□□□□□ -0.82
CDC42SE2-212ENST00000515533 CACNA1IQ9P0X4 2223 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 NRP1O14786 923 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 TBX3O15119 743 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 ASAP2O43150 1006 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 B4GALT3O60512 393 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 DDHD2O94830 711 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 BAG4O95429 457 aaKnown RBP9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 SOD2P04179 222 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 CNPP09543 421 aaKnown RBP9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 ITGA4P13612 1032 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 OR1G1P47890 313 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 CLCN4P51793 760 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 AK2P54819 239 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 CYP4A11Q02928 519 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 EMC2Q15006 297 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 EPHA7Q15375 998 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 DBN1Q16643 649 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 XKR9Q5GH70 373 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 NCAPH2Q6IBW4 605 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 NOTUMQ6P988 496 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 C15orf39Q6ZRI6 1047 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 PIK3AP1Q6ZUJ8 805 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 MRPL10Q7Z7H8 261 aaKnown RBP9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 FERMT3Q86UX7 667 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 C4orf19Q8IY42 314 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 SLFN12Q8IYM2 578 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 HACE1Q8IYU2 909 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 TMEM105Q8N8V8 129 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 RNF149Q8NC42 400 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 FLCNQ8NFG4 579 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 EPS8L1Q8TE68 723 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 ACDQ96AP0 544 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 CCDC43Q96MW1 224 aaKnown RBP9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 KLHL5Q96PQ7 755 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 PHF20Q9BVI0 1012 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 VN1R3Q9BXE9 311 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 TRIM6Q9C030 488 aaPredicted RBP9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 ZSWIM4Q9H7M6 989 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 MINDY3Q9H8M7 445 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 CYLDQ9NQC7 956 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 PDRG1Q9NUG6 133 aa9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 PRG3Q9Y2Y8 225 aaPredicted RBP9.9□□□□□ -0.82
CDC42SE2-212ENST00000515533 GVINP1Q7Z2Y8 2422 aa9.9□□□□□ -0.83
CDC42SE2-212ENST00000515533 DCHS1Q96JQ0 3298 aa9.89□□□□□ -0.83
CDC42SE2-212ENST00000515533 STK36Q9NRP7 1315 aa9.89□□□□□ -0.83
CDC42SE2-212ENST00000515533 INO80B-WBP1J3KQ70 363 aa9.89□□□□□ -0.83
CDC42SE2-212ENST00000515533 NCLP19338 710 aaKnown RBP9.89□□□□□ -0.83
CDC42SE2-212ENST00000515533 AXLP30530 894 aa9.89□□□□□ -0.83
CDC42SE2-212ENST00000515533 HOXA11P31270 313 aaPredicted RBP9.89□□□□□ -0.83
CDC42SE2-212ENST00000515533 CLCN5P51795 746 aa9.89□□□□□ -0.83
CDC42SE2-212ENST00000515533 AFF1P51825 1210 aaKnown RBP9.89□□□□□ -0.83
CDC42SE2-212ENST00000515533 TDGQ13569 410 aa9.89□□□□□ -0.83
CDC42SE2-212ENST00000515533 TFDP1Q14186 410 aa9.89□□□□□ -0.83
CDC42SE2-212ENST00000515533 MXD4Q14582 209 aaPredicted RBP9.89□□□□□ -0.83
CDC42SE2-212ENST00000515533 PCBP1Q15365 356 aaKnown RBP eCLIP9.89□□□□□ -0.83
CDC42SE2-212ENST00000515533 RIPOR1Q6ZS17 1223 aa9.89□□□□□ -0.83
CDC42SE2-212ENST00000515533 STAMQ92783 540 aa9.89□□□□□ -0.83
CDC42SE2-212ENST00000515533 GLMNQ92990 594 aa9.89□□□□□ -0.83
CDC42SE2-212ENST00000515533 CCDC51Q96ER9 411 aa9.89□□□□□ -0.83
CDC42SE2-212ENST00000515533 CCDC97Q96F63 343 aaPredicted RBP9.89□□□□□ -0.83
CDC42SE2-212ENST00000515533 DYDC2Q96IM9 177 aa9.89□□□□□ -0.83
CDC42SE2-212ENST00000515533 RPS6KC1Q96S38 1066 aa9.89□□□□□ -0.83
CDC42SE2-212ENST00000515533 BRMS1Q9HCU9 246 aa9.89□□□□□ -0.83
CDC42SE2-212ENST00000515533 MAN1C1Q9NR34 630 aa9.89□□□□□ -0.83
CDC42SE2-212ENST00000515533 WRAP73Q9P2S5 460 aaPredicted RBP9.89□□□□□ -0.83
CDC42SE2-212ENST00000515533 FBXL21Q9UKT6 434 aa9.89□□□□□ -0.83
CDC42SE2-212ENST00000515533 IPPQ9Y573 584 aa9.89□□□□□ -0.83
CDC42SE2-212ENST00000515533 EP300Q09472 2414 aaPredicted RBP9.89□□□□□ -0.83
CDC42SE2-212ENST00000515533 ARL5CA6NH57 179 aa9.88□□□□□ -0.83
CDC42SE2-212ENST00000515533 GLUD1P00367 558 aa9.88□□□□□ -0.83
CDC42SE2-212ENST00000515533 GBP2P32456 591 aaPredicted RBP9.88□□□□□ -0.83
CDC42SE2-212ENST00000515533 MLH1P40692 756 aa9.88□□□□□ -0.83
CDC42SE2-212ENST00000515533 GLUD2P49448 558 aa9.88□□□□□ -0.83
CDC42SE2-212ENST00000515533 PTENP60484 403 aa9.88□□□□□ -0.83
CDC42SE2-212ENST00000515533 SCRN1Q12765 414 aa9.88□□□□□ -0.83
CDC42SE2-212ENST00000515533 CTTNQ14247 550 aaKnown RBP9.88□□□□□ -0.83
CDC42SE2-212ENST00000515533 UBXN11Q5T124 520 aa9.88□□□□□ -0.83
CDC42SE2-212ENST00000515533 TPH2Q8IWU9 490 aa9.88□□□□□ -0.83
CDC42SE2-212ENST00000515533 COLGALT2Q8IYK4 626 aa9.88□□□□□ -0.83
CDC42SE2-212ENST00000515533 SMG8Q8ND04 991 aaKnown RBP9.88□□□□□ -0.83
CDC42SE2-212ENST00000515533 WASF1Q92558 559 aa9.88□□□□□ -0.83
CDC42SE2-212ENST00000515533 HAS1Q92839 578 aa9.88□□□□□ -0.83
CDC42SE2-212ENST00000515533 CPB2Q96IY4 423 aa9.88□□□□□ -0.83
CDC42SE2-212ENST00000515533 GAD1Q99259 594 aa9.88□□□□□ -0.83
CDC42SE2-212ENST00000515533 HERC2P3Q9BVR0 1158 aa9.88□□□□□ -0.83
CDC42SE2-212ENST00000515533 APOL6Q9BWW8 343 aa9.88□□□□□ -0.83
CDC42SE2-212ENST00000515533 RGL1Q9NZL6 768 aa9.88□□□□□ -0.83
CDC42SE2-212ENST00000515533 IGSF9Q9P2J2 1179 aa9.88□□□□□ -0.83
CDC42SE2-212ENST00000515533 DUSP12Q9UNI6 340 aa9.88□□□□□ -0.83
CDC42SE2-212ENST00000515533 FRYLO94915 3013 aa9.88□□□□□ -0.83
CDC42SE2-212ENST00000515533 CCDC195A0A1B0GUA6 201 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms