RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 CATSPER3Q86XQ3 398 aa17.37■□□□□ 0.37
LMNA-223ENST00000515459 MTMR9Q96QG7 549 aa17.37■□□□□ 0.37
LMNA-223ENST00000515459 TUFT1Q9NNX1 390 aa17.37■□□□□ 0.37
LMNA-223ENST00000515459 GDE1Q9NZC3 331 aa17.37■□□□□ 0.37
LMNA-223ENST00000515459 DAXXQ9UER7 740 aaPredicted RBP17.37■□□□□ 0.37
LMNA-223ENST00000515459 MRPS17Q9Y2R5 130 aaKnown RBP17.37■□□□□ 0.37
LMNA-223ENST00000515459 TRIP11Q15643 1979 aa17.37■□□□□ 0.37
LMNA-223ENST00000515459 FDPSP14324 419 aaKnown RBP17.36■□□□□ 0.37
LMNA-223ENST00000515459 LIG1P18858 919 aa17.36■□□□□ 0.37
LMNA-223ENST00000515459 ZNF852Q6ZMS4 543 aa17.36■□□□□ 0.37
LMNA-223ENST00000515459 ANKS3Q6ZW76 656 aa17.36■□□□□ 0.37
LMNA-223ENST00000515459 BSNDQ8WZ55 320 aa17.36■□□□□ 0.37
LMNA-223ENST00000515459 NELL1Q92832 810 aa17.36■□□□□ 0.37
LMNA-223ENST00000515459 MCRS1Q96EZ8 462 aa17.36■□□□□ 0.37
LMNA-223ENST00000515459 NACC1Q96RE7 527 aa17.36■□□□□ 0.37
LMNA-223ENST00000515459 CCDC113Q9H0I3 377 aa17.36■□□□□ 0.37
LMNA-223ENST00000515459 EPC1Q9H2F5 836 aa17.36■□□□□ 0.37
LMNA-223ENST00000515459 SMG5Q9UPR3 1016 aaKnown RBP17.36■□□□□ 0.37
LMNA-223ENST00000515459 USP20Q9Y2K6 914 aa17.36■□□□□ 0.37
LMNA-223ENST00000515459 BACE2Q9Y5Z0 518 aa17.36■□□□□ 0.37
LMNA-223ENST00000515459 BTBD18B2RXH4 712 aa17.35■□□□□ 0.37
LMNA-223ENST00000515459 WNT7AO00755 349 aa17.35■□□□□ 0.37
LMNA-223ENST00000515459 TRAPPC3O43617 180 aa17.35■□□□□ 0.37
LMNA-223ENST00000515459 LILRB5O75023 590 aa17.35■□□□□ 0.37
LMNA-223ENST00000515459 RHOP08100 348 aa17.35■□□□□ 0.37
LMNA-223ENST00000515459 IGFBP6P24592 240 aaPredicted RBP17.35■□□□□ 0.37
LMNA-223ENST00000515459 TKTP29401 623 aaKnown RBP17.35■□□□□ 0.37
LMNA-223ENST00000515459 NAMPTP43490 491 aa17.35■□□□□ 0.37
LMNA-223ENST00000515459 CLCNKBP51801 687 aa17.35■□□□□ 0.37
LMNA-223ENST00000515459 SLC5A9Q2M3M2 681 aa17.35■□□□□ 0.37
LMNA-223ENST00000515459 DCAF4L1Q3SXM0 396 aa17.35■□□□□ 0.37
LMNA-223ENST00000515459 GLRA4Q5JXX5 417 aa17.35■□□□□ 0.37
LMNA-223ENST00000515459 EEF1DP3Q658K8 133 aa17.35■□□□□ 0.37
LMNA-223ENST00000515459 PADI6Q6TGC4 694 aa17.35■□□□□ 0.37
LMNA-223ENST00000515459 DEPTORQ8TB45 409 aa17.35■□□□□ 0.37
LMNA-223ENST00000515459 UROC1Q96N76 676 aa17.35■□□□□ 0.37
LMNA-223ENST00000515459 PPP1R10Q96QC0 940 aaKnown RBP17.35■□□□□ 0.37
LMNA-223ENST00000515459 PLA2G2FQ9BZM2 168 aa17.35■□□□□ 0.37
LMNA-223ENST00000515459 AVENQ9NQS1 362 aaPredicted RBP17.35■□□□□ 0.37
LMNA-223ENST00000515459 HEBP1Q9NRV9 189 aa17.35■□□□□ 0.37
LMNA-223ENST00000515459 GPR179Q6PRD1 2367 aa17.35■□□□□ 0.37
LMNA-223ENST00000515459 PRR5-ARHGAP8B1AHC4 643 aa17.34■□□□□ 0.37
LMNA-223ENST00000515459 MED24O75448 989 aa17.34■□□□□ 0.37
LMNA-223ENST00000515459 LRG1P02750 347 aa17.34■□□□□ 0.37
LMNA-223ENST00000515459 EDN1P05305 212 aa17.34■□□□□ 0.37
LMNA-223ENST00000515459 PTPN2P17706 415 aa17.34■□□□□ 0.37
LMNA-223ENST00000515459 ARHGAP8P85298 464 aa17.34■□□□□ 0.37
LMNA-223ENST00000515459 LMNB2Q03252 620 aa17.34■□□□□ 0.37
LMNA-223ENST00000515459 ADCY1Q08828 1119 aa17.34■□□□□ 0.37
LMNA-223ENST00000515459 PPP2R5AQ15172 486 aa17.34■□□□□ 0.37
LMNA-223ENST00000515459 UPP1Q16831 310 aa17.34■□□□□ 0.37
LMNA-223ENST00000515459 TSSK4Q6SA08 328 aa17.34■□□□□ 0.37
LMNA-223ENST00000515459 DIS3L2Q8IYB7 885 aaKnown RBP17.34■□□□□ 0.37
LMNA-223ENST00000515459 ZNF461Q8TAF7 563 aa17.34■□□□□ 0.37
LMNA-223ENST00000515459 DNASE1L2Q92874 299 aa17.34■□□□□ 0.37
LMNA-223ENST00000515459 ELSPBP1Q96BH3 223 aa17.34■□□□□ 0.37
LMNA-223ENST00000515459 DDX27Q96GQ7 796 aaKnown RBP17.34■□□□□ 0.37
LMNA-223ENST00000515459 POLR3CQ9BUI4 534 aaPredicted RBP17.34■□□□□ 0.37
LMNA-223ENST00000515459 FAM126AQ9BYI3 521 aaPredicted RBP17.34■□□□□ 0.37
LMNA-223ENST00000515459 NCOR2Q9Y618 2525 aa17.34■□□□□ 0.37
LMNA-223ENST00000515459 ARHGEF37A1IGU5 675 aa17.33■□□□□ 0.36
LMNA-223ENST00000515459 TBC1D4O60343 1298 aa17.33■□□□□ 0.36
LMNA-223ENST00000515459 CYP11B2P19099 503 aa17.33■□□□□ 0.36
LMNA-223ENST00000515459 ELF1P32519 619 aa17.33■□□□□ 0.36
LMNA-223ENST00000515459 ATXN1P54253 815 aaKnown RBP17.33■□□□□ 0.36
LMNA-223ENST00000515459 FZD5Q13467 585 aa17.33■□□□□ 0.36
LMNA-223ENST00000515459 ANKRD1Q15327 319 aa17.33■□□□□ 0.36
LMNA-223ENST00000515459 TANGO2Q6ICL3 276 aa17.33■□□□□ 0.36
LMNA-223ENST00000515459 CD300LGQ6UXG3 332 aa17.33■□□□□ 0.36
LMNA-223ENST00000515459 APBB1IPQ7Z5R6 666 aaPredicted RBP17.33■□□□□ 0.36
LMNA-223ENST00000515459 TMEM60Q9H2L4 133 aa17.33■□□□□ 0.36
LMNA-223ENST00000515459 PRMT8Q9NR22 394 aaPredicted RBP17.33■□□□□ 0.36
LMNA-223ENST00000515459 ARHGEF35A5YM69 484 aa17.32■□□□□ 0.36
LMNA-223ENST00000515459 I3L4J1 428 aa17.32■□□□□ 0.36
LMNA-223ENST00000515459 PRRG1O14668 218 aa17.32■□□□□ 0.36
LMNA-223ENST00000515459 ABLIM3O94929 683 aa17.32■□□□□ 0.36
LMNA-223ENST00000515459 CEBPBP17676 345 aa17.32■□□□□ 0.36
LMNA-223ENST00000515459 MCM7P33993 719 aa17.32■□□□□ 0.36
LMNA-223ENST00000515459 BRCC3P46736 316 aa17.32■□□□□ 0.36
LMNA-223ENST00000515459 EFNA5P52803 228 aa17.32■□□□□ 0.36
LMNA-223ENST00000515459 ROR1Q01973 937 aa17.32■□□□□ 0.36
LMNA-223ENST00000515459 MTAPQ13126 283 aa17.32■□□□□ 0.36
LMNA-223ENST00000515459 TRIM29Q14134 588 aa17.32■□□□□ 0.36
LMNA-223ENST00000515459 ATF7IP2Q5U623 682 aa17.32■□□□□ 0.36
LMNA-223ENST00000515459 SLC8B1Q6J4K2 584 aa17.32■□□□□ 0.36
LMNA-223ENST00000515459 POTEHQ6S545 545 aa17.32■□□□□ 0.36
LMNA-223ENST00000515459 C3orf58Q8NDZ4 430 aa17.32■□□□□ 0.36
LMNA-223ENST00000515459 ERMNQ8TAM6 284 aa17.32■□□□□ 0.36
LMNA-223ENST00000515459 IFT74Q96LB3 600 aa17.32■□□□□ 0.36
LMNA-223ENST00000515459 CNTNAP3BQ96NU0 1288 aa17.32■□□□□ 0.36
LMNA-223ENST00000515459 CNTNAP3Q9BZ76 1288 aa17.32■□□□□ 0.36
LMNA-223ENST00000515459 BRD9Q9H8M2 597 aa17.32■□□□□ 0.36
LMNA-223ENST00000515459 GOLGA2P5Q9HBQ8 144 aa17.32■□□□□ 0.36
LMNA-223ENST00000515459 ZFP14Q9HCL3 533 aa17.32■□□□□ 0.36
LMNA-223ENST00000515459 CDV3Q9UKY7 258 aaKnown RBP17.32■□□□□ 0.36
LMNA-223ENST00000515459 WDR27A2RRH5 827 aa17.31■□□□□ 0.36
LMNA-223ENST00000515459 SHISA7A6NL88 538 aa17.31■□□□□ 0.36
LMNA-223ENST00000515459 MAN2B1O00754 1011 aa17.31■□□□□ 0.36
LMNA-223ENST00000515459 RPA1P27694 616 aa17.31■□□□□ 0.36
LMNA-223ENST00000515459 YARSP54577 528 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms