RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 SALL3Q9BXA9 1300 aa16.92■□□□□ 0.3
TRIM41-207ENST00000515223 PRPF4O43172 522 aaKnown RBP eCLIP16.91■□□□□ 0.35e-10■■■■■ 40.8
TRIM41-207ENST00000515223 TFRCP02786 760 aaKnown RBP16.91■□□□□ 0.3
TRIM41-207ENST00000515223 RBM43Q6ZSC3 357 aaKnown RBP16.91■□□□□ 0.3
TRIM41-207ENST00000515223 SYT2Q8N9I0 419 aaPredicted RBP16.91■□□□□ 0.3
TRIM41-207ENST00000515223 SPATA4Q8NEY3 305 aa16.91■□□□□ 0.3
TRIM41-207ENST00000515223 EIF2AQ9BY44 585 aaKnown RBP16.91■□□□□ 0.3
TRIM41-207ENST00000515223 MTMR4Q9NYA4 1195 aa16.91■□□□□ 0.3
TRIM41-207ENST00000515223 ANGPTL2Q9UKU9 493 aa16.91■□□□□ 0.3
TRIM41-207ENST00000515223 MAP4P27816 1152 aaKnown RBP16.91■□□□□ 0.3
TRIM41-207ENST00000515223 GMPSP49915 693 aaPredicted RBP16.91■□□□□ 0.3
TRIM41-207ENST00000515223 HPS3Q969F9 1004 aa16.91■□□□□ 0.3
TRIM41-207ENST00000515223 PPARGC1AQ9UBK2 798 aaKnown RBP16.91■□□□□ 0.3
TRIM41-207ENST00000515223 SFMBT1Q9UHJ3 866 aa16.91■□□□□ 0.3
TRIM41-207ENST00000515223 RASA4BC9J798 803 aa16.91■□□□□ 0.3
TRIM41-207ENST00000515223 RASA4O43374 803 aa16.91■□□□□ 0.3
TRIM41-207ENST00000515223 NDUFB10O96000 172 aa16.91■□□□□ 0.3
TRIM41-207ENST00000515223 HIST1H2AGP0C0S8 130 aaPredicted RBP16.91■□□□□ 0.3
TRIM41-207ENST00000515223 HIST1H2ADP20671 130 aa16.91■□□□□ 0.3
TRIM41-207ENST00000515223 ACTR2P61160 394 aa16.91■□□□□ 0.3
TRIM41-207ENST00000515223 BTBD6Q96KE9 485 aa16.91■□□□□ 0.3
TRIM41-207ENST00000515223 HIST1H2AHQ96KK5 128 aa16.91■□□□□ 0.3
TRIM41-207ENST00000515223 MED15Q96RN5 788 aa16.91■□□□□ 0.3
TRIM41-207ENST00000515223 HIST1H2AJQ99878 128 aa16.91■□□□□ 0.3
TRIM41-207ENST00000515223 H2AFJQ9BTM1 129 aa16.91■□□□□ 0.3
TRIM41-207ENST00000515223 CHCHD3Q9NX63 227 aaKnown RBP16.91■□□□□ 0.3
TRIM41-207ENST00000515223 TTC7AQ9ULT0 858 aaPredicted RBP16.91■□□□□ 0.3
TRIM41-207ENST00000515223 ZBTB12Q9Y330 459 aaPredicted RBP16.91■□□□□ 0.3
TRIM41-207ENST00000515223 PCSK1P29120 753 aa16.91■□□□□ 0.3
TRIM41-207ENST00000515223 GYPCP04921 128 aa16.91■□□□□ 0.3
TRIM41-207ENST00000515223 VCPP55072 806 aaKnown RBP16.91■□□□□ 0.3
TRIM41-207ENST00000515223 SYTL3Q4VX76 610 aa16.91■□□□□ 0.3
TRIM41-207ENST00000515223 NUGGCQ68CJ6 796 aa16.91■□□□□ 0.3
TRIM41-207ENST00000515223 NSUN4Q96CB9 384 aaKnown RBP16.91■□□□□ 0.3
TRIM41-207ENST00000515223 PITPNM3Q9BZ71 974 aa16.91■□□□□ 0.3
TRIM41-207ENST00000515223 DDX47Q9H0S4 455 aaKnown RBP16.91■□□□□ 0.3
TRIM41-207ENST00000515223 VCPKMTQ9H867 229 aa16.91■□□□□ 0.3
TRIM41-207ENST00000515223 CAPN11Q9UMQ6 739 aa16.91■□□□□ 0.3
TRIM41-207ENST00000515223 APOL1O14791 398 aa16.9■□□□□ 0.3
TRIM41-207ENST00000515223 CPT1AP50416 773 aa16.9■□□□□ 0.3
TRIM41-207ENST00000515223 SF3B3Q15393 1217 aaKnown RBP16.9■□□□□ 0.3
TRIM41-207ENST00000515223 TARSL2A2RTX5 802 aaKnown RBP16.9■□□□□ 0.3
TRIM41-207ENST00000515223 CFAP69A5D8W1 941 aa16.9■□□□□ 0.3
TRIM41-207ENST00000515223 DCTN3O75935 186 aa16.9■□□□□ 0.3
TRIM41-207ENST00000515223 CYP2C9P11712 490 aa16.9■□□□□ 0.3
TRIM41-207ENST00000515223 RFC5P40937 340 aa16.9■□□□□ 0.3
TRIM41-207ENST00000515223 ZNF543Q08ER8 600 aa16.9■□□□□ 0.3
TRIM41-207ENST00000515223 ANO4Q32M45 955 aa16.9■□□□□ 0.3
TRIM41-207ENST00000515223 SGMS1Q86VZ5 419 aa16.9■□□□□ 0.3
TRIM41-207ENST00000515223 CHST13Q8NET6 341 aa16.9■□□□□ 0.3
TRIM41-207ENST00000515223 KIFC3Q9BVG8 833 aa16.9■□□□□ 0.3
TRIM41-207ENST00000515223 WNT8AQ9H1J5 351 aa16.9■□□□□ 0.3
TRIM41-207ENST00000515223 AGPAT5Q9NUQ2 364 aa16.9■□□□□ 0.3
TRIM41-207ENST00000515223 WDR35Q9P2L0 1181 aa16.9■□□□□ 0.3
TRIM41-207ENST00000515223 LIMA1Q9UHB6 759 aaKnown RBP16.9■□□□□ 0.3
TRIM41-207ENST00000515223 CHRNA3P32297 505 aa16.9■□□□□ 0.3
TRIM41-207ENST00000515223 DPYDQ12882 1025 aa16.9■□□□□ 0.3
TRIM41-207ENST00000515223 PDIA5Q14554 519 aa16.9■□□□□ 0.3
TRIM41-207ENST00000515223 CEP19Q96LK0 163 aa16.9■□□□□ 0.3
TRIM41-207ENST00000515223 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.9■□□□□ 0.3
TRIM41-207ENST00000515223 RRN3P2A6NIE6 340 aa16.9■□□□□ 0.3
TRIM41-207ENST00000515223 CHUKO15111 745 aa16.9■□□□□ 0.3
TRIM41-207ENST00000515223 STYK1Q6J9G0 422 aa16.9■□□□□ 0.3
TRIM41-207ENST00000515223 ZNF746Q6NUN9 644 aaPredicted RBP16.9■□□□□ 0.3
TRIM41-207ENST00000515223 RASSF3Q86WH2 238 aa16.9■□□□□ 0.3
TRIM41-207ENST00000515223 C18orf8Q96DM3 657 aa16.9■□□□□ 0.3
TRIM41-207ENST00000515223 SEPT5Q99719 369 aaPredicted RBP16.9■□□□□ 0.3
TRIM41-207ENST00000515223 SENP1Q9P0U3 644 aa16.9■□□□□ 0.3
TRIM41-207ENST00000515223 LOC102724159A0A0B4J2E5 919 aa16.89■□□□□ 0.3
TRIM41-207ENST00000515223 UBE2Q2LH0YL09 131 aa16.89■□□□□ 0.3
TRIM41-207ENST00000515223 TRIM49P0CI25 452 aa16.89■□□□□ 0.3
TRIM41-207ENST00000515223 TRIM49CP0CI26 452 aa16.89■□□□□ 0.3
TRIM41-207ENST00000515223 DEUP1Q05D60 604 aa16.89■□□□□ 0.3
TRIM41-207ENST00000515223 ARHGEF7Q14155 803 aa16.89■□□□□ 0.3
TRIM41-207ENST00000515223 PWP2Q15269 919 aaKnown RBP16.89■□□□□ 0.3
TRIM41-207ENST00000515223 DGKDQ16760 1214 aa16.89■□□□□ 0.3
TRIM41-207ENST00000515223 ARHGAP15Q53QZ3 475 aa16.89■□□□□ 0.3
TRIM41-207ENST00000515223 SLC24A3Q9HC58 644 aa16.89■□□□□ 0.3
TRIM41-207ENST00000515223 GMNCA6NCL1 334 aa16.89■□□□□ 0.29
TRIM41-207ENST00000515223 EIF4E1BA6NMX2 242 aaKnown RBP16.89■□□□□ 0.29
TRIM41-207ENST00000515223 SULT1E1P49888 294 aa16.89■□□□□ 0.29
TRIM41-207ENST00000515223 GPS1Q13098 491 aa16.89■□□□□ 0.29
TRIM41-207ENST00000515223 ANKRD40Q6AI12 368 aa16.89■□□□□ 0.29
TRIM41-207ENST00000515223 ATP6V1G3Q96LB4 118 aa16.89■□□□□ 0.29
TRIM41-207ENST00000515223 MLXIPLQ9NP71 852 aa16.89■□□□□ 0.29
TRIM41-207ENST00000515223 A0A0G2JND7 137 aa16.89■□□□□ 0.29
TRIM41-207ENST00000515223 STAG3L1P0CL83 205 aa16.89■□□□□ 0.29
TRIM41-207ENST00000515223 LAMB3Q13751 1172 aa16.89■□□□□ 0.29
TRIM41-207ENST00000515223 FRMD5Q7Z6J6 570 aa16.89■□□□□ 0.29
TRIM41-207ENST00000515223 SCFD1Q8WVM8 642 aa16.89■□□□□ 0.29
TRIM41-207ENST00000515223 FUT8Q9BYC5 575 aa16.89■□□□□ 0.29
TRIM41-207ENST00000515223 KIAA1210Q9ULL0 1709 aa16.89■□□□□ 0.29
TRIM41-207ENST00000515223 PSMD3O43242 534 aa16.89■□□□□ 0.29
TRIM41-207ENST00000515223 KCNA2P16389 499 aa16.89■□□□□ 0.29
TRIM41-207ENST00000515223 ALDH1A3P47895 512 aa16.89■□□□□ 0.29
TRIM41-207ENST00000515223 ATP2C1P98194 919 aaPredicted RBP16.89■□□□□ 0.29
TRIM41-207ENST00000515223 RABL6Q3YEC7 729 aaPredicted RBP16.89■□□□□ 0.29
TRIM41-207ENST00000515223 ERAP1Q9NZ08 941 aa16.89■□□□□ 0.29
TRIM41-207ENST00000515223 HPS5Q9UPZ3 1129 aa16.89■□□□□ 0.29
TRIM41-207ENST00000515223 PDXKO00764 312 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms