RNA–Protein interactions for RNA: ENST00000515159.5

SLC38A9-222, Transcript of solute carrier family 38 member 9, human

TSL 2

Gene SLC38A9, Length 3,509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC38A9-222	ENST00000515159	SCOC	Q9UIL1	159 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	PITPNM2	Q9BZ72	1349 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	GPR25	O00155	361 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	BACH1	O14867	736 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	SKI	P12755	728 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	UQCRB	P14927	111 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	CREB1	P16220	341 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	EPHB2	P29323	1055 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	GBP1	P32455	592 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	SLC1A4	P43007	532 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	RXRG	P48443	463 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	PSMD8	P48556	350 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	BCAP31	P51572	246 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	PEX3	P56589	373 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	TXNL4A	P83876	142 aa	Known RBP	4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	ARHGAP4	P98171	946 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	SLC18A3	Q16572	532 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	GREB1	Q4ZG55	1949 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	ZNF394	Q53GI3	561 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	SFT2D3	Q587I9	215 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	FBXO31	Q5XUX0	539 aa	Predicted RBP	4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	TTC27	Q6P3X3	843 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	KIAA0895	Q8NCT3	520 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	OR6Y1	Q8NGX8	325 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	EDC3	Q96F86	508 aa	Known RBP	4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	MED30	Q96HR3	178 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	ZNF496	Q96IT1	587 aa	Predicted RBP	4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	UBXN10	Q96LJ8	280 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	C7orf25	Q9BPX7	421 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	HEPH	Q9BQS7	1158 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	EIF2A	Q9BY44	585 aa	Known RBP	4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	CDH19	Q9H159	772 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	VCX	Q9H320	206 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	SEMA6B	Q9H3T3	888 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	EBF3	Q9H4W6	596 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	USP40	Q9NVE5	1235 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	ARHGEF38	Q9NXL2	777 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	SCHIP1	Q9P0W5	487 aa	Predicted RBP	4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	DENND2A	Q9ULE3	1009 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	R3HDM2	Q9Y2K5	976 aa	Known RBP	4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	DIS3	Q9Y2L1	958 aa	Known RBP	4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	WASF2	Q9Y6W5	498 aa		4.8	□□□□□ -1.64
SLC38A9-222	ENST00000515159	ANKRD34B	A5PLL1	514 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159		H3BQV1	296 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	CDK2AP1	O14519	115 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	IDH3B	O43837	385 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	CTNND1	O60716	968 aa	Known RBP	4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	KRT36	O76013	467 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	GH1	P01241	217 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	DLD	P09622	509 aa	Known RBP	4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	CHRNB2	P17787	502 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	PTPN1	P18031	435 aa	Known RBP	4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	RPL17	P18621	184 aa	Known RBP	4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	M6PR	P20645	277 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	TGM1	P22735	817 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	KLRC1	P26715	233 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	KIF5B	P33176	963 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	IDUA	P35475	653 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	CYLC1	P35663	651 aa	Predicted RBP	4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	SERPINB4	P48594	390 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	SCNN1D	P51172	638 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	DCTN2	Q13561	401 aa	Known RBP	4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	COG2	Q14746	738 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	LSM12	Q3MHD2	195 aa	Known RBP	4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	C10orf76	Q5T2E6	689 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	IFFO2	Q5TF58	517 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	RAPH1	Q70E73	1250 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	TMC7	Q7Z402	723 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	CROCCP2	Q86T23	111 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	ITIH5	Q86UX2	942 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	PEX5L	Q8IYB4	626 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	RIBC1	Q8N443	379 aa	Predicted RBP	4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	TBC1D15	Q8TC07	691 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	USP33	Q8TEY7	942 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	ESR2	Q92731	530 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	SNF8	Q96H20	258 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	NGLY1	Q96IV0	654 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	BTN2A3P	Q96KV6	586 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	CAPZA3	Q96KX2	299 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	RPRD1A	Q96P16	312 aa	Predicted RBP	4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	CCDC106	Q9BWC9	280 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	MRPS26	Q9BYN8	205 aa	Known RBP	4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	SYNC	Q9H7C4	482 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	ZNHIT6	Q9NWK9	470 aa	Known RBP	4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	STOML1	Q9UBI4	398 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	VPS28	Q9UK41	221 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	DNAJC16	Q9Y2G8	782 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	PCDHGA11	Q9Y5H2	935 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	SQOR	Q9Y6N5	450 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159		A0A1W2PQ67	120 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	RASA4B	C9J798	803 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	RNF113A	O15541	343 aa	Known RBP	4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	RASA4	O43374	803 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	CYTH3	O43739	400 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	MARCH6	O60337	910 aa		4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	MTRF1	O75570	445 aa	Known RBP	4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	GOT2	P00505	430 aa	Known RBP	4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	TROVE2	P10155	538 aa	Known RBP eCLIP	4.79	□□□□□ -1.64
SLC38A9-222	ENST00000515159	MYBL1	P10243	752 aa		4.79	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms