RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 MICAL2O94851 1124 aa13.2□□□□□ -0.3
SMAD5-210ENST00000515005 KIF4AO95239 1232 aa13.2□□□□□ -0.3
SMAD5-210ENST00000515005 TRIM16O95361 564 aa13.2□□□□□ -0.3
SMAD5-210ENST00000515005 CYP3A4P08684 503 aa13.2□□□□□ -0.3
SMAD5-210ENST00000515005 SRGAP2CP0DJJ0 459 aa13.2□□□□□ -0.3
SMAD5-210ENST00000515005 NAPAP54920 295 aa13.2□□□□□ -0.3
SMAD5-210ENST00000515005 FAM193AP78312 1265 aa13.2□□□□□ -0.3
SMAD5-210ENST00000515005 AP3B2Q13367 1082 aa13.2□□□□□ -0.3
SMAD5-210ENST00000515005 SRGAP1Q7Z6B7 1085 aa13.2□□□□□ -0.3
SMAD5-210ENST00000515005 RAB44Q7Z6P3 723 aaPredicted RBP13.2□□□□□ -0.3
SMAD5-210ENST00000515005 ZSCAN18Q8TBC5 510 aaPredicted RBP13.2□□□□□ -0.3
SMAD5-210ENST00000515005 MDM1Q8TC05 714 aa13.2□□□□□ -0.3
SMAD5-210ENST00000515005 FAM200AQ8TCP9 573 aa13.2□□□□□ -0.3
SMAD5-210ENST00000515005 NXF3Q9H4D5 531 aaKnown RBP13.2□□□□□ -0.3
SMAD5-210ENST00000515005 TRPV4Q9HBA0 871 aa13.2□□□□□ -0.3
SMAD5-210ENST00000515005 GTSE1Q9NYZ3 720 aa13.2□□□□□ -0.3
SMAD5-210ENST00000515005 KLK14Q9P0G3 267 aa13.2□□□□□ -0.3
SMAD5-210ENST00000515005 GIT1Q9Y2X7 761 aa13.2□□□□□ -0.3
SMAD5-210ENST00000515005 RAI2Q9Y5P3 530 aa13.2□□□□□ -0.3
SMAD5-210ENST00000515005 COL4A3BPQ9Y5P4 624 aa13.2□□□□□ -0.3
SMAD5-210ENST00000515005 CDY1Q9Y6F8 540 aa13.2□□□□□ -0.3
SMAD5-210ENST00000515005 ARHGEF37A1IGU5 675 aa13.19□□□□□ -0.3
SMAD5-210ENST00000515005 CASTOR2A6NHX0 329 aa13.19□□□□□ -0.3
SMAD5-210ENST00000515005 ZNF197O14709 1029 aa13.19□□□□□ -0.3
SMAD5-210ENST00000515005 CHADO15335 359 aa13.19□□□□□ -0.3
SMAD5-210ENST00000515005 CHMP2AO43633 222 aa13.19□□□□□ -0.3
SMAD5-210ENST00000515005 MOSPD3O75425 235 aa13.19□□□□□ -0.3
SMAD5-210ENST00000515005 MAFO75444 373 aaPredicted RBP13.19□□□□□ -0.3
SMAD5-210ENST00000515005 LRG1P02750 347 aa13.19□□□□□ -0.3
SMAD5-210ENST00000515005 GJA1P17302 382 aa13.19□□□□□ -0.3
SMAD5-210ENST00000515005 AKAP5P24588 427 aa13.19□□□□□ -0.3
SMAD5-210ENST00000515005 CLK2P49760 499 aaKnown RBP13.19□□□□□ -0.3
SMAD5-210ENST00000515005 GRIK3Q13003 919 aa13.19□□□□□ -0.3
SMAD5-210ENST00000515005 PRR16Q569H4 304 aa13.19□□□□□ -0.3
SMAD5-210ENST00000515005 JAKMIP3Q5VZ66 844 aa13.19□□□□□ -0.3
SMAD5-210ENST00000515005 PDZD4Q76G19 769 aaPredicted RBP13.19□□□□□ -0.3
SMAD5-210ENST00000515005 RALYLQ86SE5 291 aaKnown RBP13.19□□□□□ -0.3
SMAD5-210ENST00000515005 PIP4P1Q86T03 277 aa13.19□□□□□ -0.3
SMAD5-210ENST00000515005 ZNF605Q86T29 641 aa13.19□□□□□ -0.3
SMAD5-210ENST00000515005 RAB11FIP4Q86YS3 637 aa13.19□□□□□ -0.3
SMAD5-210ENST00000515005 YAF2Q8IY57 180 aa13.19□□□□□ -0.3
SMAD5-210ENST00000515005 SLC39A7Q92504 469 aa13.19□□□□□ -0.3
SMAD5-210ENST00000515005 CPB2Q96IY4 423 aa13.19□□□□□ -0.3
SMAD5-210ENST00000515005 HHIPQ96QV1 700 aa13.19□□□□□ -0.3
SMAD5-210ENST00000515005 HNRNPABQ99729 332 aaKnown RBP13.19□□□□□ -0.3
SMAD5-210ENST00000515005 IL25Q9H293 177 aa13.19□□□□□ -0.3
SMAD5-210ENST00000515005 SNTG2Q9NY99 539 aa13.19□□□□□ -0.3
SMAD5-210ENST00000515005 ZBTB47Q9UFB7 747 aaPredicted RBP13.19□□□□□ -0.3
SMAD5-210ENST00000515005 CCDC194A0A1B0GVG4 234 aa13.18□□□□□ -0.3
SMAD5-210ENST00000515005 SMCO2A6NFE2 343 aa13.18□□□□□ -0.3
SMAD5-210ENST00000515005 CYP21A2P08686 494 aa13.18□□□□□ -0.3
SMAD5-210ENST00000515005 GBP1P32455 592 aa13.18□□□□□ -0.3
SMAD5-210ENST00000515005 RDXP35241 583 aaKnown RBP13.18□□□□□ -0.3
SMAD5-210ENST00000515005 MAPK8P45983 427 aa13.18□□□□□ -0.3
SMAD5-210ENST00000515005 HNRNPUQ00839 825 aaKnown RBP eCLIP13.18□□□□□ -0.3
SMAD5-210ENST00000515005 SETQ01105 290 aaPredicted RBP13.18□□□□□ -0.3
SMAD5-210ENST00000515005 SPIRE1Q08AE8 756 aa13.18□□□□□ -0.3
SMAD5-210ENST00000515005 XKR3Q5GH77 459 aa13.18□□□□□ -0.3
SMAD5-210ENST00000515005 PDXDC1Q6P996 788 aa13.18□□□□□ -0.3
SMAD5-210ENST00000515005 GPIHBP1Q8IV16 184 aa13.18□□□□□ -0.3
SMAD5-210ENST00000515005 HS6ST3Q8IZP7 471 aa13.18□□□□□ -0.3
SMAD5-210ENST00000515005 CAMKK1Q8N5S9 505 aa13.18□□□□□ -0.3
SMAD5-210ENST00000515005 NCOA7Q8NI08 942 aa13.18□□□□□ -0.3
SMAD5-210ENST00000515005 ZFYVE19Q96K21 471 aa13.18□□□□□ -0.3
SMAD5-210ENST00000515005 UBL7Q96S82 380 aaPredicted RBP13.18□□□□□ -0.3
SMAD5-210ENST00000515005 MTRRQ9UBK8 725 aa13.18□□□□□ -0.3
SMAD5-210ENST00000515005 INVSQ9Y283 1065 aa13.18□□□□□ -0.3
SMAD5-210ENST00000515005 E7EWF7 191 aa13.17□□□□□ -0.3
SMAD5-210ENST00000515005 CCER2I3L3R5 266 aa13.17□□□□□ -0.3
SMAD5-210ENST00000515005 CALM1P0DP23 149 aa13.17□□□□□ -0.3
SMAD5-210ENST00000515005 CALM2P0DP24 149 aa13.17□□□□□ -0.3
SMAD5-210ENST00000515005 CALM3P0DP25 149 aa13.17□□□□□ -0.3
SMAD5-210ENST00000515005 FCHO2Q0JRZ9 810 aa13.17□□□□□ -0.3
SMAD5-210ENST00000515005 SEMA3BQ13214 749 aa13.17□□□□□ -0.3
SMAD5-210ENST00000515005 TMTC3Q6ZXV5 915 aa13.17□□□□□ -0.3
SMAD5-210ENST00000515005 TEX2Q8IWB9 1127 aa13.17□□□□□ -0.3
SMAD5-210ENST00000515005 PRPF31Q8WWY3 499 aaKnown RBP13.17□□□□□ -0.3
SMAD5-210ENST00000515005 CSRNP2Q9H175 543 aa13.17□□□□□ -0.3
SMAD5-210ENST00000515005 ADAMTS9Q9P2N4 1935 aa13.16□□□□□ -0.3
SMAD5-210ENST00000515005 DDX11L8A8MPP1 907 aa13.16□□□□□ -0.3
SMAD5-210ENST00000515005 TK2O00142 265 aa13.16□□□□□ -0.3
SMAD5-210ENST00000515005 PRRG1O14668 218 aa13.16□□□□□ -0.3
SMAD5-210ENST00000515005 ADAMTS3O15072 1205 aa13.16□□□□□ -0.3
SMAD5-210ENST00000515005 TSPAN1O60635 241 aa13.16□□□□□ -0.3
SMAD5-210ENST00000515005 ATG13O75143 517 aa13.16□□□□□ -0.3
SMAD5-210ENST00000515005 ERLIN2O94905 339 aa13.16□□□□□ -0.3
SMAD5-210ENST00000515005 FGFR3P22607 806 aa13.16□□□□□ -0.3
SMAD5-210ENST00000515005 IGFBP6P24592 240 aaPredicted RBP13.16□□□□□ -0.3
SMAD5-210ENST00000515005 TUSC3Q13454 348 aa13.16□□□□□ -0.3
SMAD5-210ENST00000515005 KARSQ15046 597 aaKnown RBP13.16□□□□□ -0.3
SMAD5-210ENST00000515005 TEAD2Q15562 447 aa13.16□□□□□ -0.3
SMAD5-210ENST00000515005 ZNF423Q2M1K9 1284 aa13.16□□□□□ -0.3
SMAD5-210ENST00000515005 CYP4A22Q5TCH4 519 aa13.16□□□□□ -0.3
SMAD5-210ENST00000515005 PMS2CLQ68D20 193 aa13.16□□□□□ -0.3
SMAD5-210ENST00000515005 PLA2G4FQ68DD2 849 aa13.16□□□□□ -0.3
SMAD5-210ENST00000515005 PPP1R18Q6NYC8 613 aa13.16□□□□□ -0.3
SMAD5-210ENST00000515005 NOTUMQ6P988 496 aa13.16□□□□□ -0.3
SMAD5-210ENST00000515005 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.16□□□□□ -0.3
SMAD5-210ENST00000515005 CCNI2Q6ZMN8 369 aaPredicted RBP13.16□□□□□ -0.3
SMAD5-210ENST00000515005 CYP2U1Q7Z449 544 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms