RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 SLC7A14Q8TBB6 771 aa13.41□□□□□ -0.26
SNHG4-208ENST00000514110 GPR152Q8TDT2 470 aa13.41□□□□□ -0.26
SNHG4-208ENST00000514110 RPP25Q9BUL9 199 aaKnown RBP13.41□□□□□ -0.26
SNHG4-208ENST00000514110 TARS2Q9BW92 718 aaKnown RBP13.41□□□□□ -0.26
SNHG4-208ENST00000514110 RAB34Q9BZG1 259 aa13.41□□□□□ -0.26
SNHG4-208ENST00000514110 TMEM134Q9H6X4 195 aa13.41□□□□□ -0.26
SNHG4-208ENST00000514110 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.41□□□□□ -0.26
SNHG4-208ENST00000514110 ARHGAP28Q9P2N2 729 aa13.41□□□□□ -0.26
SNHG4-208ENST00000514110 MTRRQ9UBK8 725 aa13.41□□□□□ -0.26
SNHG4-208ENST00000514110 POLIQ9UNA4 740 aa13.41□□□□□ -0.26
SNHG4-208ENST00000514110 STK24Q9Y6E0 443 aa13.41□□□□□ -0.26
SNHG4-208ENST00000514110 NUMBLQ9Y6R0 609 aa13.41□□□□□ -0.26
SNHG4-208ENST00000514110 ZFHX2Q9C0A1 2572 aaPredicted RBP13.41□□□□□ -0.26
SNHG4-208ENST00000514110 TRIP11Q15643 1979 aa13.41□□□□□ -0.26
SNHG4-208ENST00000514110 PRR23AA6NEV1 266 aa13.4□□□□□ -0.26
SNHG4-208ENST00000514110 SFI1A8K8P3 1242 aa13.4□□□□□ -0.26
SNHG4-208ENST00000514110 STK25O00506 426 aa13.4□□□□□ -0.26
SNHG4-208ENST00000514110 ABLIM1O14639 778 aa13.4□□□□□ -0.26
SNHG4-208ENST00000514110 HOXA9P31269 272 aa13.4□□□□□ -0.26
SNHG4-208ENST00000514110 PRPHP41219 470 aa13.4□□□□□ -0.26
SNHG4-208ENST00000514110 DMP1Q13316 513 aaPredicted RBP13.4□□□□□ -0.26
SNHG4-208ENST00000514110 ANGPT1Q15389 498 aa13.4□□□□□ -0.26
SNHG4-208ENST00000514110 ZNF568Q3ZCX4 644 aa13.4□□□□□ -0.26
SNHG4-208ENST00000514110 PARM1Q6UWI2 310 aa13.4□□□□□ -0.26
SNHG4-208ENST00000514110 DTHD1Q6ZMT9 781 aa13.4□□□□□ -0.26
SNHG4-208ENST00000514110 C1orf186Q6ZWK4 172 aa13.4□□□□□ -0.26
SNHG4-208ENST00000514110 APBB1IPQ7Z5R6 666 aaPredicted RBP13.4□□□□□ -0.26
SNHG4-208ENST00000514110 ITFG1Q8TB96 612 aa13.4□□□□□ -0.26
SNHG4-208ENST00000514110 FGF14Q92915 247 aa13.4□□□□□ -0.26
SNHG4-208ENST00000514110 DDX27Q96GQ7 796 aaKnown RBP13.4□□□□□ -0.26
SNHG4-208ENST00000514110 DRC1Q96MC2 740 aa13.4□□□□□ -0.26
SNHG4-208ENST00000514110 UROC1Q96N76 676 aa13.4□□□□□ -0.26
SNHG4-208ENST00000514110 ZMAT2Q96NC0 199 aaKnown RBP13.4□□□□□ -0.26
SNHG4-208ENST00000514110 MRPL4Q9BYD3 311 aaKnown RBP13.4□□□□□ -0.26
SNHG4-208ENST00000514110 TBC1D17Q9HA65 648 aa13.4□□□□□ -0.26
SNHG4-208ENST00000514110 KMT5AQ9NQR1 393 aa13.4□□□□□ -0.26
SNHG4-208ENST00000514110 HCFC1R1Q9NWW0 138 aa13.4□□□□□ -0.26
SNHG4-208ENST00000514110 CDY1Q9Y6F8 540 aa13.4□□□□□ -0.26
SNHG4-208ENST00000514110 ZFP37Q9Y6Q3 630 aaPredicted RBP13.4□□□□□ -0.26
SNHG4-208ENST00000514110 LAD1O00515 517 aa13.39□□□□□ -0.27
SNHG4-208ENST00000514110 SLC16A4O15374 487 aa13.39□□□□□ -0.27
SNHG4-208ENST00000514110 MEFVO15553 781 aaPredicted RBP13.39□□□□□ -0.27
SNHG4-208ENST00000514110 XYLBO75191 536 aa13.39□□□□□ -0.27
SNHG4-208ENST00000514110 PROZP22891 400 aa13.39□□□□□ -0.27
SNHG4-208ENST00000514110 YARSP54577 528 aaKnown RBP13.39□□□□□ -0.27
SNHG4-208ENST00000514110 UVSSAQ2YD98 709 aa13.39□□□□□ -0.27
SNHG4-208ENST00000514110 FGF13Q92913 245 aa13.39□□□□□ -0.27
SNHG4-208ENST00000514110 ZBTB45Q96K62 511 aaPredicted RBP13.39□□□□□ -0.27
SNHG4-208ENST00000514110 SNX27Q96L92 541 aa13.39□□□□□ -0.27
SNHG4-208ENST00000514110 CCDC94Q9BW85 323 aaPredicted RBP13.39□□□□□ -0.27
SNHG4-208ENST00000514110 SLC2A4RGQ9NR83 387 aa13.39□□□□□ -0.27
SNHG4-208ENST00000514110 TOPORSQ9NS56 1045 aaPredicted RBP13.39□□□□□ -0.27
SNHG4-208ENST00000514110 DNMT3BQ9UBC3 853 aaKnown RBP13.39□□□□□ -0.27
SNHG4-208ENST00000514110 CDH7Q9ULB5 785 aa13.39□□□□□ -0.27
SNHG4-208ENST00000514110 PODXLO00592 558 aa13.38□□□□□ -0.27
SNHG4-208ENST00000514110 TRAPPC3O43617 180 aa13.38□□□□□ -0.27
SNHG4-208ENST00000514110 POU2F2P09086 479 aa13.38□□□□□ -0.27
SNHG4-208ENST00000514110 MCF2P10911 925 aa13.38□□□□□ -0.27
SNHG4-208ENST00000514110 ATP2C1P98194 919 aaPredicted RBP13.38□□□□□ -0.27
SNHG4-208ENST00000514110 RAD51AP2Q09MP3 1159 aa13.38□□□□□ -0.27
SNHG4-208ENST00000514110 ZRSR1Q15695 479 aaKnown RBP13.38□□□□□ -0.27
SNHG4-208ENST00000514110 MCTP1Q6DN14 999 aa13.38□□□□□ -0.27
SNHG4-208ENST00000514110 C18orf25Q96B23 403 aaPredicted RBP13.38□□□□□ -0.27
SNHG4-208ENST00000514110 ACAP3Q96P50 834 aa13.38□□□□□ -0.27
SNHG4-208ENST00000514110 PNMA5Q96PV4 448 aa13.38□□□□□ -0.27
SNHG4-208ENST00000514110 TCHPQ9BT92 498 aa13.38□□□□□ -0.27
SNHG4-208ENST00000514110 ARHGEF3Q9NR81 526 aa13.38□□□□□ -0.27
SNHG4-208ENST00000514110 RBM19Q9Y4C8 960 aaKnown RBP13.38□□□□□ -0.27
SNHG4-208ENST00000514110 BACE2Q9Y5Z0 518 aa13.38□□□□□ -0.27
SNHG4-208ENST00000514110 NOTCH4Q99466 2003 aa13.38□□□□□ -0.27
SNHG4-208ENST00000514110 COL4A3Q01955 1670 aa13.37□□□□□ -0.27
SNHG4-208ENST00000514110 MYH15Q9Y2K3 1946 aa13.37□□□□□ -0.27
SNHG4-208ENST00000514110 DCNP07585 359 aaKnown RBP13.37□□□□□ -0.27
SNHG4-208ENST00000514110 HARSP12081 509 aaKnown RBP13.37□□□□□ -0.27
SNHG4-208ENST00000514110 KCNE1P15382 129 aa13.37□□□□□ -0.27
SNHG4-208ENST00000514110 RFX1P22670 979 aa13.37□□□□□ -0.27
SNHG4-208ENST00000514110 GUCY2CP25092 1073 aa13.37□□□□□ -0.27
SNHG4-208ENST00000514110 GPC5P78333 572 aa13.37□□□□□ -0.27
SNHG4-208ENST00000514110 ROR1Q01973 937 aa13.37□□□□□ -0.27
SNHG4-208ENST00000514110 PABPC1LQ4VXU2 614 aaKnown RBP13.37□□□□□ -0.27
SNHG4-208ENST00000514110 SEZ6Q53EL9 994 aa13.37□□□□□ -0.27
SNHG4-208ENST00000514110 SPECC1Q5M775 1068 aa13.37□□□□□ -0.27
SNHG4-208ENST00000514110 VARS2Q5ST30 1063 aaKnown RBP13.37□□□□□ -0.27
SNHG4-208ENST00000514110 HYIQ5T013 277 aa13.37□□□□□ -0.27
SNHG4-208ENST00000514110 PHLDB3Q6NSJ2 640 aa13.37□□□□□ -0.27
SNHG4-208ENST00000514110 MPZL3Q6UWV2 235 aa13.37□□□□□ -0.27
SNHG4-208ENST00000514110 ANKS3Q6ZW76 656 aa13.37□□□□□ -0.27
SNHG4-208ENST00000514110 NPAS3Q8IXF0 933 aa13.37□□□□□ -0.27
SNHG4-208ENST00000514110 SYT2Q8N9I0 419 aaPredicted RBP13.37□□□□□ -0.27
SNHG4-208ENST00000514110 NKD2Q969F2 451 aaPredicted RBP13.37□□□□□ -0.27
SNHG4-208ENST00000514110 PLIN2Q99541 437 aa13.37□□□□□ -0.27
SNHG4-208ENST00000514110 NTPCRQ9BSD7 190 aaKnown RBP13.37□□□□□ -0.27
SNHG4-208ENST00000514110 C17orf75Q9HAS0 396 aa13.37□□□□□ -0.27
SNHG4-208ENST00000514110 SLC38A7Q9NVC3 462 aa13.37□□□□□ -0.27
SNHG4-208ENST00000514110 DLGAP2Q9P1A6 1054 aa13.37□□□□□ -0.27
SNHG4-208ENST00000514110 CNTN3Q9P232 1028 aa13.37□□□□□ -0.27
SNHG4-208ENST00000514110 WDR27A2RRH5 827 aa13.36□□□□□ -0.27
SNHG4-208ENST00000514110 VWA3AA6NCI4 1184 aa13.36□□□□□ -0.27
SNHG4-208ENST00000514110 TBC1D4O60343 1298 aa13.36□□□□□ -0.27
SNHG4-208ENST00000514110 CD2BP2O95400 341 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms