RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 DPP6P42658 865 aa13.25□□□□□ -0.29
SFXN1-210ENST00000513725 DRP2Q13474 957 aa13.25□□□□□ -0.29
SFXN1-210ENST00000513725 SEC23AQ15436 765 aa13.25□□□□□ -0.29
SFXN1-210ENST00000513725 SLC23A3Q6PIS1 610 aa13.25□□□□□ -0.29
SFXN1-210ENST00000513725 SYT12Q8IV01 421 aa13.25□□□□□ -0.29
SFXN1-210ENST00000513725 SMAP1Q8IYB5 467 aaPredicted RBP13.25□□□□□ -0.29
SFXN1-210ENST00000513725 FAM227BQ96M60 508 aa13.25□□□□□ -0.29
SFXN1-210ENST00000513725 KIF2CQ99661 725 aa13.25□□□□□ -0.29
SFXN1-210ENST00000513725 ZBTB40Q9NUA8 1239 aa13.25□□□□□ -0.29
SFXN1-210ENST00000513725 MIOSQ9NXC5 875 aa13.25□□□□□ -0.29
SFXN1-210ENST00000513725 PCDHA10Q9Y5I2 948 aa13.25□□□□□ -0.29
SFXN1-210ENST00000513725 ZMYM2Q9UBW7 1377 aa13.24□□□□□ -0.29
SFXN1-210ENST00000513725 NCANO14594 1321 aa13.24□□□□□ -0.29
SFXN1-210ENST00000513725 ARHGEF37A1IGU5 675 aa13.24□□□□□ -0.29
SFXN1-210ENST00000513725 B8ZZF3 427 aa13.24□□□□□ -0.29
SFXN1-210ENST00000513725 OATP04181 439 aa13.24□□□□□ -0.29
SFXN1-210ENST00000513725 ITPKBP27987 946 aa13.24□□□□□ -0.29
SFXN1-210ENST00000513725 CCR2P41597 374 aa13.24□□□□□ -0.29
SFXN1-210ENST00000513725 CSRP3P50461 194 aa13.24□□□□□ -0.29
SFXN1-210ENST00000513725 HSP90AA2PQ14568 343 aaPredicted RBP13.24□□□□□ -0.29
SFXN1-210ENST00000513725 PTPAQ15257 358 aa13.24□□□□□ -0.29
SFXN1-210ENST00000513725 ARHGAP29Q52LW3 1261 aa13.24□□□□□ -0.29
SFXN1-210ENST00000513725 UBXN11Q5T124 520 aa13.24□□□□□ -0.29
SFXN1-210ENST00000513725 ZNF746Q6NUN9 644 aaPredicted RBP13.24□□□□□ -0.29
SFXN1-210ENST00000513725 TMPRSS7Q7RTY8 843 aa13.24□□□□□ -0.29
SFXN1-210ENST00000513725 GPR155Q7Z3F1 870 aa13.24□□□□□ -0.29
SFXN1-210ENST00000513725 RHPN2Q8IUC4 686 aa13.24□□□□□ -0.29
SFXN1-210ENST00000513725 SMG8Q8ND04 991 aaKnown RBP13.24□□□□□ -0.29
SFXN1-210ENST00000513725 RABGGTAQ92696 567 aa13.24□□□□□ -0.29
SFXN1-210ENST00000513725 ZFP42Q96MM3 310 aa13.24□□□□□ -0.29
SFXN1-210ENST00000513725 GPR88Q9GZN0 384 aa13.24□□□□□ -0.29
SFXN1-210ENST00000513725 SLITRK6Q9H5Y7 841 aa13.24□□□□□ -0.29
SFXN1-210ENST00000513725 CNNM2Q9H8M5 875 aa13.24□□□□□ -0.29
SFXN1-210ENST00000513725 POLR3BQ9NW08 1133 aaPredicted RBP13.24□□□□□ -0.29
SFXN1-210ENST00000513725 A0A0D9SFI3 127 aa13.23□□□□□ -0.29
SFXN1-210ENST00000513725 FAM205CA6NFA0 338 aa13.23□□□□□ -0.29
SFXN1-210ENST00000513725 TNFRSF10BO14763 440 aa13.23□□□□□ -0.29
SFXN1-210ENST00000513725 RNF40O75150 1001 aa13.23□□□□□ -0.29
SFXN1-210ENST00000513725 CFIP05156 583 aa13.23□□□□□ -0.29
SFXN1-210ENST00000513725 CD59P13987 128 aa13.23□□□□□ -0.29
SFXN1-210ENST00000513725 ELF1P32519 619 aa13.23□□□□□ -0.29
SFXN1-210ENST00000513725 ZNF76P36508 570 aa13.23□□□□□ -0.29
SFXN1-210ENST00000513725 GFPT1Q06210 699 aaPredicted RBP13.23□□□□□ -0.29
SFXN1-210ENST00000513725 ELAVL2Q12926 359 aaKnown RBP13.23□□□□□ -0.29
SFXN1-210ENST00000513725 TAF1BQ53T94 588 aaPredicted RBP13.23□□□□□ -0.29
SFXN1-210ENST00000513725 COLEC12Q5KU26 742 aa13.23□□□□□ -0.29
SFXN1-210ENST00000513725 SYT13Q7L8C5 426 aa13.23□□□□□ -0.29
SFXN1-210ENST00000513725 ZNF589Q86UQ0 364 aaPredicted RBP13.23□□□□□ -0.29
SFXN1-210ENST00000513725 NLRP4Q96MN2 994 aa13.23□□□□□ -0.29
SFXN1-210ENST00000513725 CAMK1GQ96NX5 476 aa13.23□□□□□ -0.29
SFXN1-210ENST00000513725 ARID3AQ99856 593 aa13.23□□□□□ -0.29
SFXN1-210ENST00000513725 DDX19BQ9UMR2 479 aa13.23□□□□□ -0.29
SFXN1-210ENST00000513725 IPPQ9Y573 584 aa13.23□□□□□ -0.29
SFXN1-210ENST00000513725 PTPRBP23467 1997 aa13.23□□□□□ -0.29
SFXN1-210ENST00000513725 SALL3Q9BXA9 1300 aa13.22□□□□□ -0.29
SFXN1-210ENST00000513725 ENO4A6NNW6 628 aa13.22□□□□□ -0.29
SFXN1-210ENST00000513725 ERVH48-1M5A8F1 160 aa13.22□□□□□ -0.29
SFXN1-210ENST00000513725 IPO5O00410 1097 aaKnown RBP13.22□□□□□ -0.29
SFXN1-210ENST00000513725 PRRG1O14668 218 aa13.22□□□□□ -0.29
SFXN1-210ENST00000513725 DHX15O43143 795 aaKnown RBP13.22□□□□□ -0.29
SFXN1-210ENST00000513725 SH3BP5O60239 455 aa13.22□□□□□ -0.29
SFXN1-210ENST00000513725 BCKDHBP21953 392 aa13.22□□□□□ -0.29
SFXN1-210ENST00000513725 SLC14A1Q13336 389 aa13.22□□□□□ -0.29
SFXN1-210ENST00000513725 TMEM196Q5HYL7 178 aa13.22□□□□□ -0.29
SFXN1-210ENST00000513725 IQCEQ6IPM2 695 aa13.22□□□□□ -0.29
SFXN1-210ENST00000513725 LPCAT2Q7L5N7 544 aa13.22□□□□□ -0.29
SFXN1-210ENST00000513725 NIPA1Q7RTP0 329 aa13.22□□□□□ -0.29
SFXN1-210ENST00000513725 ELMOD1Q8N336 334 aa13.22□□□□□ -0.29
SFXN1-210ENST00000513725 MINDY1Q8N5J2 469 aa13.22□□□□□ -0.29
SFXN1-210ENST00000513725 HASPINQ8TF76 798 aa13.22□□□□□ -0.29
SFXN1-210ENST00000513725 EVI5LQ96CN4 794 aa13.22□□□□□ -0.29
SFXN1-210ENST00000513725 SPZ1Q9BXG8 430 aa13.22□□□□□ -0.29
SFXN1-210ENST00000513725 RNF39Q9H2S5 420 aa13.22□□□□□ -0.29
SFXN1-210ENST00000513725 CHMP4BQ9H444 224 aaKnown RBP13.22□□□□□ -0.29
SFXN1-210ENST00000513725 TBC1D22BQ9NU19 505 aa13.22□□□□□ -0.29
SFXN1-210ENST00000513725 SNTG2Q9NY99 539 aa13.22□□□□□ -0.29
SFXN1-210ENST00000513725 KIAA1522Q9P206 1035 aaPredicted RBP13.22□□□□□ -0.29
SFXN1-210ENST00000513725 SUCLA2Q9P2R7 463 aaPredicted RBP13.22□□□□□ -0.29
SFXN1-210ENST00000513725 SLC6A14Q9UN76 642 aa13.22□□□□□ -0.29
SFXN1-210ENST00000513725 GIT1Q9Y2X7 761 aa13.22□□□□□ -0.29
SFXN1-210ENST00000513725 SAMM50Q9Y512 469 aa13.22□□□□□ -0.29
SFXN1-210ENST00000513725 CDY1Q9Y6F8 540 aa13.22□□□□□ -0.29
SFXN1-210ENST00000513725 ATMQ13315 3056 aa13.21□□□□□ -0.29
SFXN1-210ENST00000513725 PI4KAP42356 2102 aa13.21□□□□□ -0.29
SFXN1-210ENST00000513725 ATG2BQ96BY7 2078 aa13.21□□□□□ -0.29
SFXN1-210ENST00000513725 SLC28A2O43868 658 aa13.21□□□□□ -0.29
SFXN1-210ENST00000513725 HOXA11P31270 313 aaPredicted RBP13.21□□□□□ -0.29
SFXN1-210ENST00000513725 MFAP1P55081 439 aaKnown RBP13.21□□□□□ -0.29
SFXN1-210ENST00000513725 PLCB2Q00722 1185 aa13.21□□□□□ -0.29
SFXN1-210ENST00000513725 PRKCEQ02156 737 aa13.21□□□□□ -0.29
SFXN1-210ENST00000513725 GRIK3Q13003 919 aa13.21□□□□□ -0.29
SFXN1-210ENST00000513725 DMC1Q14565 340 aa13.21□□□□□ -0.29
SFXN1-210ENST00000513725 ITPRIPL2Q3MIP1 535 aa13.21□□□□□ -0.29
SFXN1-210ENST00000513725 FSTL4Q6MZW2 842 aa13.21□□□□□ -0.29
SFXN1-210ENST00000513725 PCSK4Q6UW60 755 aa13.21□□□□□ -0.29
SFXN1-210ENST00000513725 HACE1Q8IYU2 909 aa13.21□□□□□ -0.29
SFXN1-210ENST00000513725 PDCD7Q8N8D1 485 aaKnown RBP13.21□□□□□ -0.29
SFXN1-210ENST00000513725 LEMD2Q8NC56 503 aa13.21□□□□□ -0.29
SFXN1-210ENST00000513725 CEP76Q8TAP6 659 aa13.21□□□□□ -0.29
SFXN1-210ENST00000513725 ACDQ96AP0 544 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms