RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 MXD4Q14582 209 aaPredicted RBP11.64□□□□□ -0.55
CLDND1-227ENST00000513452 ADCK5Q3MIX3 580 aa11.64□□□□□ -0.55
CLDND1-227ENST00000513452 XKR9Q5GH70 373 aa11.64□□□□□ -0.55
CLDND1-227ENST00000513452 PRSS36Q5K4E3 855 aa11.64□□□□□ -0.55
CLDND1-227ENST00000513452 PSAPL1Q6NUJ1 521 aa11.64□□□□□ -0.55
CLDND1-227ENST00000513452 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.64□□□□□ -0.55
CLDND1-227ENST00000513452 MAP4K3Q8IVH8 894 aa11.64□□□□□ -0.55
CLDND1-227ENST00000513452 ASAP3Q8TDY4 903 aa11.64□□□□□ -0.55
CLDND1-227ENST00000513452 ASB16Q96NS5 453 aa11.64□□□□□ -0.55
CLDND1-227ENST00000513452 CORO1BQ9BR76 489 aa11.64□□□□□ -0.55
CLDND1-227ENST00000513452 AVENQ9NQS1 362 aaPredicted RBP11.64□□□□□ -0.55
CLDND1-227ENST00000513452 XPNPEP1Q9NQW7 623 aa11.64□□□□□ -0.55
CLDND1-227ENST00000513452 MTRRQ9UBK8 725 aa11.64□□□□□ -0.55
CLDND1-227ENST00000513452 DDX25Q9UHL0 483 aaKnown RBP11.64□□□□□ -0.55
CLDND1-227ENST00000513452 VAV3Q9UKW4 847 aa11.64□□□□□ -0.55
CLDND1-227ENST00000513452 ARID2Q68CP9 1835 aa11.63□□□□□ -0.55
CLDND1-227ENST00000513452 ZZEF1O43149 2961 aa11.63□□□□□ -0.55
CLDND1-227ENST00000513452 VWA8A3KMH1 1905 aa11.63□□□□□ -0.55
CLDND1-227ENST00000513452 WDR27A2RRH5 827 aa11.63□□□□□ -0.55
CLDND1-227ENST00000513452 PRRG1O14668 218 aa11.63□□□□□ -0.55
CLDND1-227ENST00000513452 ZBTB39O15060 712 aa11.63□□□□□ -0.55
CLDND1-227ENST00000513452 PAPSS2O95340 614 aaPredicted RBP11.63□□□□□ -0.55
CLDND1-227ENST00000513452 ZNF806P0C7X5 589 aa11.63□□□□□ -0.55
CLDND1-227ENST00000513452 PTPN2P17706 415 aa11.63□□□□□ -0.55
CLDND1-227ENST00000513452 FGFR3P22607 806 aa11.63□□□□□ -0.55
CLDND1-227ENST00000513452 LRRC32Q14392 662 aa11.63□□□□□ -0.55
CLDND1-227ENST00000513452 RTL10Q7L3V2 364 aa11.63□□□□□ -0.55
CLDND1-227ENST00000513452 OTUD6AQ7L8S5 288 aa11.63□□□□□ -0.55
CLDND1-227ENST00000513452 IFNLR1Q8IU57 520 aaPredicted RBP11.63□□□□□ -0.55
CLDND1-227ENST00000513452 SMARCD2Q92925 531 aa11.63□□□□□ -0.55
CLDND1-227ENST00000513452 SLC26A6Q9BXS9 759 aa11.63□□□□□ -0.55
CLDND1-227ENST00000513452 C22orf23Q9BZE7 217 aa11.63□□□□□ -0.55
CLDND1-227ENST00000513452 SMOC1Q9H4F8 434 aa11.63□□□□□ -0.55
CLDND1-227ENST00000513452 TRPV5Q9NQA5 729 aa11.63□□□□□ -0.55
CLDND1-227ENST00000513452 C2orf42Q9NWW7 574 aa11.63□□□□□ -0.55
CLDND1-227ENST00000513452 NID2Q14112 1375 aa11.63□□□□□ -0.55
CLDND1-227ENST00000513452 NCANO14594 1321 aa11.62□□□□□ -0.55
CLDND1-227ENST00000513452 ASPMQ8IZT6 3477 aa11.62□□□□□ -0.55
CLDND1-227ENST00000513452 SLC38A8A6NNN8 435 aa11.62□□□□□ -0.55
CLDND1-227ENST00000513452 ZNF263O14978 683 aa11.62□□□□□ -0.55
CLDND1-227ENST00000513452 RECQL4O94761 1208 aa11.62□□□□□ -0.55
CLDND1-227ENST00000513452 EPN2O95208 641 aa11.62□□□□□ -0.55
CLDND1-227ENST00000513452 THP07101 528 aa11.62□□□□□ -0.55
CLDND1-227ENST00000513452 SPINK2P20155 84 aa11.62□□□□□ -0.55
CLDND1-227ENST00000513452 IGFBP6P24592 240 aaPredicted RBP11.62□□□□□ -0.55
CLDND1-227ENST00000513452 TKTP29401 623 aaKnown RBP11.62□□□□□ -0.55
CLDND1-227ENST00000513452 VIPR2P41587 438 aa11.62□□□□□ -0.55
CLDND1-227ENST00000513452 CCR2P41597 374 aa11.62□□□□□ -0.55
CLDND1-227ENST00000513452 SOX9P48436 509 aa11.62□□□□□ -0.55
CLDND1-227ENST00000513452 CYP4A11Q02928 519 aa11.62□□□□□ -0.55
CLDND1-227ENST00000513452 NAB2Q15742 525 aa11.62□□□□□ -0.55
CLDND1-227ENST00000513452 MOXD1Q6UVY6 613 aa11.62□□□□□ -0.55
CLDND1-227ENST00000513452 PDZD4Q76G19 769 aaPredicted RBP11.62□□□□□ -0.55
CLDND1-227ENST00000513452 WDR5BQ86VZ2 330 aa11.62□□□□□ -0.55
CLDND1-227ENST00000513452 C4orf19Q8IY42 314 aa11.62□□□□□ -0.55
CLDND1-227ENST00000513452 RASEFQ8IZ41 740 aa11.62□□□□□ -0.55
CLDND1-227ENST00000513452 KDF1Q8NAX2 398 aaPredicted RBP11.62□□□□□ -0.55
CLDND1-227ENST00000513452 DEPDC1BQ8WUY9 529 aa11.62□□□□□ -0.55
CLDND1-227ENST00000513452 ZSWIM3Q96MP5 696 aa11.62□□□□□ -0.55
CLDND1-227ENST00000513452 LSM14BQ9BX40 385 aaKnown RBP11.62□□□□□ -0.55
CLDND1-227ENST00000513452 RNF26Q9BY78 433 aaPredicted RBP11.62□□□□□ -0.55
CLDND1-227ENST00000513452 CXCL16Q9H2A7 254 aa11.62□□□□□ -0.55
CLDND1-227ENST00000513452 RGL1Q9NZL6 768 aa11.62□□□□□ -0.55
CLDND1-227ENST00000513452 PCDHA4Q9UN74 947 aa11.62□□□□□ -0.55
CLDND1-227ENST00000513452 GREB1Q4ZG55 1949 aa11.62□□□□□ -0.55
CLDND1-227ENST00000513452 A0A1B0GUA9 196 aa11.61□□□□□ -0.55
CLDND1-227ENST00000513452 ARHGEF37A1IGU5 675 aa11.61□□□□□ -0.55
CLDND1-227ENST00000513452 I3L4J1 428 aa11.61□□□□□ -0.55
CLDND1-227ENST00000513452 ZNF197O14709 1029 aa11.61□□□□□ -0.55
CLDND1-227ENST00000513452 B3GAT3O94766 335 aa11.61□□□□□ -0.55
CLDND1-227ENST00000513452 CPA1P15085 419 aa11.61□□□□□ -0.55
CLDND1-227ENST00000513452 GLRA2P23416 452 aa11.61□□□□□ -0.55
CLDND1-227ENST00000513452 ELF1P32519 619 aa11.61□□□□□ -0.55
CLDND1-227ENST00000513452 NOVA1P51513 510 aaKnown RBP11.61□□□□□ -0.55
CLDND1-227ENST00000513452 KPNA1P52294 538 aaPredicted RBP11.61□□□□□ -0.55
CLDND1-227ENST00000513452 ROR1Q01973 937 aa11.61□□□□□ -0.55
CLDND1-227ENST00000513452 POU5F1BQ06416 359 aa11.61□□□□□ -0.55
CLDND1-227ENST00000513452 SPIRE1Q08AE8 756 aa11.61□□□□□ -0.55
CLDND1-227ENST00000513452 FOXC1Q12948 553 aa11.61□□□□□ -0.55
CLDND1-227ENST00000513452 CTTNQ14247 550 aaKnown RBP11.61□□□□□ -0.55
CLDND1-227ENST00000513452 NTRK3Q16288 839 aa11.61□□□□□ -0.55
CLDND1-227ENST00000513452 INF2Q27J81 1249 aa11.61□□□□□ -0.55
CLDND1-227ENST00000513452 WDR44Q5JSH3 913 aa11.61□□□□□ -0.55
CLDND1-227ENST00000513452 ANKS3Q6ZW76 656 aa11.61□□□□□ -0.55
CLDND1-227ENST00000513452 KBTBD6Q86V97 674 aa11.61□□□□□ -0.55
CLDND1-227ENST00000513452 ZSCAN18Q8TBC5 510 aaPredicted RBP11.61□□□□□ -0.55
CLDND1-227ENST00000513452 CSGALNACT1Q8TDX6 532 aa11.61□□□□□ -0.55
CLDND1-227ENST00000513452 BRF1Q92994 677 aa11.61□□□□□ -0.55
CLDND1-227ENST00000513452 DDX27Q96GQ7 796 aaKnown RBP11.61□□□□□ -0.55
CLDND1-227ENST00000513452 DYDC2Q96IM9 177 aa11.61□□□□□ -0.55
CLDND1-227ENST00000513452 SH3GLB2Q9NR46 395 aa11.61□□□□□ -0.55
CLDND1-227ENST00000513452 SNTG2Q9NY99 539 aa11.61□□□□□ -0.55
CLDND1-227ENST00000513452 BACE2Q9Y5Z0 518 aa11.61□□□□□ -0.55
CLDND1-227ENST00000513452 LRRIQ4A6NIV6 560 aa11.6□□□□□ -0.55
CLDND1-227ENST00000513452 ARNTLO00327 626 aa11.6□□□□□ -0.55
CLDND1-227ENST00000513452 GIPC1O14908 333 aa11.6□□□□□ -0.55
CLDND1-227ENST00000513452 TBX3O15119 743 aa11.6□□□□□ -0.55
CLDND1-227ENST00000513452 RPP40O75818 363 aaKnown RBP11.6□□□□□ -0.55
CLDND1-227ENST00000513452 PRKCBP05771 671 aa11.6□□□□□ -0.55
CLDND1-227ENST00000513452 GJA1P17302 382 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms