RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 PIAS3Q9Y6X2 628 aa12.44□□□□□ -0.42
RNF4-218ENST00000513284 GREB1Q4ZG55 1949 aa12.44□□□□□ -0.42
RNF4-218ENST00000513284 TICRRQ7Z2Z1 1910 aa12.43□□□□□ -0.42
RNF4-218ENST00000513284 ARHGEF37A1IGU5 675 aa12.43□□□□□ -0.42
RNF4-218ENST00000513284 SRRM3A6NNA2 597 aaPredicted RBP12.43□□□□□ -0.42
RNF4-218ENST00000513284 TTLL13PA6NNM8 815 aa12.43□□□□□ -0.42
RNF4-218ENST00000513284 INO80B-WBP1J3KQ70 363 aa12.43□□□□□ -0.42
RNF4-218ENST00000513284 M0R2N6 131 aa12.43□□□□□ -0.42
RNF4-218ENST00000513284 HOXA6P31267 233 aa12.43□□□□□ -0.42
RNF4-218ENST00000513284 RFC5P40937 340 aa12.43□□□□□ -0.42
RNF4-218ENST00000513284 POU5F1BQ06416 359 aa12.43□□□□□ -0.42
RNF4-218ENST00000513284 EMC2Q15006 297 aa12.43□□□□□ -0.42
RNF4-218ENST00000513284 PCBP1Q15365 356 aaKnown RBP eCLIP12.43□□□□□ -0.42
RNF4-218ENST00000513284 RNF20Q5VTR2 975 aa12.43□□□□□ -0.42
RNF4-218ENST00000513284 ASAP3Q8TDY4 903 aa12.43□□□□□ -0.42
RNF4-218ENST00000513284 CCDC12Q8WUD4 166 aaPredicted RBP12.43□□□□□ -0.42
RNF4-218ENST00000513284 IRF7Q92985 503 aa12.43□□□□□ -0.42
RNF4-218ENST00000513284 COL26A1Q96A83 441 aa12.43□□□□□ -0.42
RNF4-218ENST00000513284 RSPRY1Q96DX4 576 aa12.43□□□□□ -0.42
RNF4-218ENST00000513284 RGL1Q9NZL6 768 aa12.43□□□□□ -0.42
RNF4-218ENST00000513284 VPS54Q9P1Q0 977 aa12.43□□□□□ -0.42
RNF4-218ENST00000513284 PARP2Q9UGN5 583 aa12.43□□□□□ -0.42
RNF4-218ENST00000513284 CDY1Q9Y6F8 540 aa12.43□□□□□ -0.42
RNF4-218ENST00000513284 SETXQ7Z333 2677 aaKnown RBP12.43□□□□□ -0.42
RNF4-218ENST00000513284 WDR27A2RRH5 827 aa12.42□□□□□ -0.42
RNF4-218ENST00000513284 SLC37A4O43826 429 aa12.42□□□□□ -0.42
RNF4-218ENST00000513284 MICAL2O94851 1124 aa12.42□□□□□ -0.42
RNF4-218ENST00000513284 ABLIM3O94929 683 aa12.42□□□□□ -0.42
RNF4-218ENST00000513284 P4HBP07237 508 aaKnown RBP12.42□□□□□ -0.42
RNF4-218ENST00000513284 PSMC3P17980 439 aa12.42□□□□□ -0.42
RNF4-218ENST00000513284 YWHABP31946 246 aaKnown RBP12.42□□□□□ -0.42
RNF4-218ENST00000513284 ARL2P36404 184 aa12.42□□□□□ -0.42
RNF4-218ENST00000513284 SOX9P48436 509 aa12.42□□□□□ -0.42
RNF4-218ENST00000513284 RCAN1P53805 252 aa12.42□□□□□ -0.42
RNF4-218ENST00000513284 MLLT6P55198 1093 aaPredicted RBP12.42□□□□□ -0.42
RNF4-218ENST00000513284 IRX6P78412 446 aaPredicted RBP12.42□□□□□ -0.42
RNF4-218ENST00000513284 RING1Q06587 406 aa12.42□□□□□ -0.42
RNF4-218ENST00000513284 PPP2R5CQ13362 524 aa12.42□□□□□ -0.42
RNF4-218ENST00000513284 CAPSQ13938 189 aa12.42□□□□□ -0.42
RNF4-218ENST00000513284 PSAPL1Q6NUJ1 521 aa12.42□□□□□ -0.42
RNF4-218ENST00000513284 TXNDC11Q6PKC3 985 aa12.42□□□□□ -0.42
RNF4-218ENST00000513284 CEP68Q76N32 757 aa12.42□□□□□ -0.42
RNF4-218ENST00000513284 KBTBD6Q86V97 674 aa12.42□□□□□ -0.42
RNF4-218ENST00000513284 WDR5BQ86VZ2 330 aa12.42□□□□□ -0.42
RNF4-218ENST00000513284 C4orf19Q8IY42 314 aa12.42□□□□□ -0.42
RNF4-218ENST00000513284 EXOC8Q8IYI6 725 aa12.42□□□□□ -0.42
RNF4-218ENST00000513284 HS6ST3Q8IZP7 471 aa12.42□□□□□ -0.42
RNF4-218ENST00000513284 BICD2Q8TD16 824 aa12.42□□□□□ -0.42
RNF4-218ENST00000513284 TCP11Q8WWU5 503 aa12.42□□□□□ -0.42
RNF4-218ENST00000513284 CORO1BQ9BR76 489 aa12.42□□□□□ -0.42
RNF4-218ENST00000513284 ESYT1Q9BSJ8 1104 aa12.42□□□□□ -0.42
RNF4-218ENST00000513284 TRIM6Q9C030 488 aaPredicted RBP12.42□□□□□ -0.42
RNF4-218ENST00000513284 PPME1Q9Y570 386 aa12.42□□□□□ -0.42
RNF4-218ENST00000513284 BACE2Q9Y5Z0 518 aa12.42□□□□□ -0.42
RNF4-218ENST00000513284 LOC400499M0QZD8 3231 aa12.41□□□□□ -0.42
RNF4-218ENST00000513284 SOBPA7XYQ1 873 aa12.41□□□□□ -0.42
RNF4-218ENST00000513284 EPN2O95208 641 aa12.41□□□□□ -0.42
RNF4-218ENST00000513284 SEC24AO95486 1093 aa12.41□□□□□ -0.42
RNF4-218ENST00000513284 SPIRE1Q08AE8 756 aa12.41□□□□□ -0.42
RNF4-218ENST00000513284 NCBP1Q09161 790 aaKnown RBP12.41□□□□□ -0.42
RNF4-218ENST00000513284 NPY5RQ15761 445 aa12.41□□□□□ -0.42
RNF4-218ENST00000513284 TSGA10IPQ3SY00 556 aa12.41□□□□□ -0.42
RNF4-218ENST00000513284 SLC27A1Q6PCB7 646 aa12.41□□□□□ -0.42
RNF4-218ENST00000513284 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.41□□□□□ -0.42
RNF4-218ENST00000513284 MFSD6LQ8IWD5 586 aa12.41□□□□□ -0.42
RNF4-218ENST00000513284 C12orf50Q8NA57 414 aaPredicted RBP12.41□□□□□ -0.42
RNF4-218ENST00000513284 ZNF461Q8TAF7 563 aa12.41□□□□□ -0.42
RNF4-218ENST00000513284 GATA6Q92908 595 aa12.41□□□□□ -0.42
RNF4-218ENST00000513284 SMARCD2Q92925 531 aa12.41□□□□□ -0.42
RNF4-218ENST00000513284 LOXL4Q96JB6 756 aa12.41□□□□□ -0.42
RNF4-218ENST00000513284 LRRC3BQ96PB8 259 aa12.41□□□□□ -0.42
RNF4-218ENST00000513284 TRPV4Q9HBA0 871 aa12.41□□□□□ -0.42
RNF4-218ENST00000513284 SNTG2Q9NY99 539 aa12.41□□□□□ -0.42
RNF4-218ENST00000513284 ZMYM2Q9UBW7 1377 aa12.41□□□□□ -0.42
RNF4-218ENST00000513284 ITPR1Q14643 2758 aa12.4□□□□□ -0.42
RNF4-218ENST00000513284 I3L4J1 428 aa12.4□□□□□ -0.42
RNF4-218ENST00000513284 ZNF263O14978 683 aa12.4□□□□□ -0.42
RNF4-218ENST00000513284 EXTL3O43909 919 aa12.4□□□□□ -0.42
RNF4-218ENST00000513284 THP07101 528 aa12.4□□□□□ -0.42
RNF4-218ENST00000513284 CPA1P15085 419 aa12.4□□□□□ -0.42
RNF4-218ENST00000513284 GJA1P17302 382 aa12.4□□□□□ -0.42
RNF4-218ENST00000513284 GLRA2P23416 452 aa12.4□□□□□ -0.42
RNF4-218ENST00000513284 TKTP29401 623 aaKnown RBP12.4□□□□□ -0.42
RNF4-218ENST00000513284 PXNP49023 591 aaPredicted RBP12.4□□□□□ -0.42
RNF4-218ENST00000513284 MXD4Q14582 209 aaPredicted RBP12.4□□□□□ -0.42
RNF4-218ENST00000513284 XKR9Q5GH70 373 aa12.4□□□□□ -0.42
RNF4-218ENST00000513284 TCEAL6Q6IPX3 200 aa12.4□□□□□ -0.42
RNF4-218ENST00000513284 PKN3Q6P5Z2 889 aa12.4□□□□□ -0.42
RNF4-218ENST00000513284 PDXDC1Q6P996 788 aa12.4□□□□□ -0.42
RNF4-218ENST00000513284 HACE1Q8IYU2 909 aa12.4□□□□□ -0.42
RNF4-218ENST00000513284 C3orf58Q8NDZ4 430 aa12.4□□□□□ -0.42
RNF4-218ENST00000513284 HAS1Q92839 578 aa12.4□□□□□ -0.42
RNF4-218ENST00000513284 TCEAL3Q969E4 200 aa12.4□□□□□ -0.42
RNF4-218ENST00000513284 DDX27Q96GQ7 796 aaKnown RBP12.4□□□□□ -0.42
RNF4-218ENST00000513284 MTRQ99707 1265 aa12.4□□□□□ -0.42
RNF4-218ENST00000513284 NFKBIZQ9BYH8 718 aa12.4□□□□□ -0.42
RNF4-218ENST00000513284 KCNMB3Q9NPA1 279 aa12.4□□□□□ -0.42
RNF4-218ENST00000513284 ANO2Q9NQ90 1003 aa12.4□□□□□ -0.42
RNF4-218ENST00000513284 USP20Q9Y2K6 914 aa12.4□□□□□ -0.42
RNF4-218ENST00000513284 CCDC196A0A1B0GTZ2 297 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms