RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 ALDH5A1P51649 535 aaPredicted RBP13.91□□□□□ -0.18
PCDHA4-202ENST00000512229 BCAR1P56945 870 aa13.91□□□□□ -0.18
PCDHA4-202ENST00000512229 TMED2Q15363 201 aa13.91□□□□□ -0.18
PCDHA4-202ENST00000512229 TTC31Q49AM3 519 aaPredicted RBP13.91□□□□□ -0.18
PCDHA4-202ENST00000512229 SCN4BQ8IWT1 228 aa13.91□□□□□ -0.18
PCDHA4-202ENST00000512229 BBS5Q8N3I7 341 aa13.91□□□□□ -0.18
PCDHA4-202ENST00000512229 FBXO41Q8TF61 875 aa13.91□□□□□ -0.18
PCDHA4-202ENST00000512229 POP1Q99575 1024 aaKnown RBP13.91□□□□□ -0.18
PCDHA4-202ENST00000512229 CNOT10Q9H9A5 744 aaKnown RBP13.91□□□□□ -0.18
PCDHA4-202ENST00000512229 RBM12Q9NTZ6 932 aaKnown RBP13.91□□□□□ -0.18
PCDHA4-202ENST00000512229 SMARCAL1Q9NZC9 954 aa13.91□□□□□ -0.18
PCDHA4-202ENST00000512229 GTF2H1P32780 548 aa13.9□□□□□ -0.18
PCDHA4-202ENST00000512229 CCDC62Q6P9F0 684 aa13.9□□□□□ -0.18
PCDHA4-202ENST00000512229 SH3BP5LQ7L8J4 393 aa13.9□□□□□ -0.18
PCDHA4-202ENST00000512229 ETNPPLQ8TBG4 499 aa13.9□□□□□ -0.18
PCDHA4-202ENST00000512229 SPIRE2Q8WWL2 714 aa13.9□□□□□ -0.18
PCDHA4-202ENST00000512229 RILPQ96NA2 401 aa13.9□□□□□ -0.18
PCDHA4-202ENST00000512229 SAYSD1Q9NPB0 183 aa13.9□□□□□ -0.18
PCDHA4-202ENST00000512229 GYS2P54840 703 aa13.9□□□□□ -0.18
PCDHA4-202ENST00000512229 LY6KQ17RY6 165 aa13.9□□□□□ -0.18
PCDHA4-202ENST00000512229 SPATS2Q86XZ4 545 aaKnown RBP13.9□□□□□ -0.18
PCDHA4-202ENST00000512229 ATP8B4Q8TF62 1192 aa13.9□□□□□ -0.18
PCDHA4-202ENST00000512229 HSD17B14Q9BPX1 270 aa13.9□□□□□ -0.18
PCDHA4-202ENST00000512229 SENP7Q9BQF6 1050 aa13.9□□□□□ -0.18
PCDHA4-202ENST00000512229 KLRG2A4D1S0 409 aaPredicted RBP13.9□□□□□ -0.18
PCDHA4-202ENST00000512229 IRF6O14896 467 aa13.9□□□□□ -0.18
PCDHA4-202ENST00000512229 STRNO43815 780 aa13.9□□□□□ -0.18
PCDHA4-202ENST00000512229 PLA2G6O60733 806 aa13.9□□□□□ -0.18
PCDHA4-202ENST00000512229 CDH6P55285 790 aa13.9□□□□□ -0.18
PCDHA4-202ENST00000512229 CUL2Q13617 745 aa13.9□□□□□ -0.18
PCDHA4-202ENST00000512229 MAP7D1Q3KQU3 841 aa13.9□□□□□ -0.18
PCDHA4-202ENST00000512229 CCNI2Q6ZMN8 369 aaPredicted RBP13.9□□□□□ -0.18
PCDHA4-202ENST00000512229 RAET1EQ8TD07 263 aa13.9□□□□□ -0.18
PCDHA4-202ENST00000512229 AFG1LQ8WV93 481 aa13.9□□□□□ -0.18
PCDHA4-202ENST00000512229 CAMKK2Q96RR4 588 aa13.9□□□□□ -0.18
PCDHA4-202ENST00000512229 NT5C1AQ9BXI3 368 aa13.9□□□□□ -0.18
PCDHA4-202ENST00000512229 KLC2Q9H0B6 622 aa13.9□□□□□ -0.18
PCDHA4-202ENST00000512229 TMEM117Q9H0C3 514 aa13.9□□□□□ -0.18
PCDHA4-202ENST00000512229 THAP2Q9H0W7 228 aa13.9□□□□□ -0.18
PCDHA4-202ENST00000512229 CPSF3Q9UKF6 684 aaKnown RBP13.9□□□□□ -0.18
PCDHA4-202ENST00000512229 F8VZ95 297 aa13.9□□□□□ -0.19
PCDHA4-202ENST00000512229 ATMINO43313 823 aaPredicted RBP13.9□□□□□ -0.19
PCDHA4-202ENST00000512229 ZC3H11AO75152 810 aaKnown RBP eCLIP13.9□□□□□ -0.19
PCDHA4-202ENST00000512229 SRGAP2BP0DMP2 458 aa13.9□□□□□ -0.19
PCDHA4-202ENST00000512229 PPM1FP49593 454 aaPredicted RBP13.9□□□□□ -0.19
PCDHA4-202ENST00000512229 ARL4CP56559 192 aa13.9□□□□□ -0.19
PCDHA4-202ENST00000512229 KCNA1Q09470 495 aa13.9□□□□□ -0.19
PCDHA4-202ENST00000512229 ATL2Q8NHH9 583 aa13.9□□□□□ -0.19
PCDHA4-202ENST00000512229 FAF2Q96CS3 445 aa13.9□□□□□ -0.19
PCDHA4-202ENST00000512229 CDCA5Q96FF9 252 aa13.9□□□□□ -0.19
PCDHA4-202ENST00000512229 CHORDC1Q9UHD1 332 aaPredicted RBP13.9□□□□□ -0.19
PCDHA4-202ENST00000512229 NID2Q14112 1375 aa13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 PI4K2BG5E9Z4 385 aa13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 H3BRB1 525 aa13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 MT-ND3P03897 115 aa13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 PDGFRAP16234 1089 aa13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 SAT1P21673 171 aa13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 CDR2Q01850 454 aa13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 GPAT2Q6NUI2 795 aa13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 USP50Q70EL3 339 aaPredicted RBP13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 ZNF571Q7Z3V5 609 aaPredicted RBP13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 TPCN2Q8NHX9 752 aa13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 TUT1Q9H6E5 874 aaKnown RBP13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 CYP39A1Q9NYL5 469 aa13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 AIPL1Q9NZN9 384 aa13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 UBIAD1Q9Y5Z9 338 aa13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 CD4P01730 458 aa13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 GARSP41250 739 aaKnown RBP13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 CASP5P51878 434 aa13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 CYP24A1Q07973 514 aa13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 SLC51AQ86UW1 340 aa13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 VPS52Q8N1B4 723 aa13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 TRPM4Q8TD43 1214 aa13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 CCT6BQ92526 530 aa13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 HPDLQ96IR7 371 aa13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 CARD9Q9H257 536 aa13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 PDHXO00330 501 aa13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 TTI1O43156 1089 aa13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 PMS2P54278 862 aa13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 NOTUMQ6P988 496 aa13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 AFAP1L2Q8N4X5 818 aa13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 ANKRD7Q92527 254 aa13.89□□□□□ -0.19
PCDHA4-202ENST00000512229 CRCPO75575 148 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 RPS6KA5O75582 802 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 SGPL1O95470 568 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 GZMAP12544 262 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 CPT1AP50416 773 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 GPS1Q13098 491 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 KIAA1755Q5JYT7 1200 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 PPP4R1Q8TF05 950 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 PPM1EQ8WY54 764 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 MCUR1Q96AQ8 359 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 DHX35Q9H5Z1 703 aaKnown RBP13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 EFCC1Q9HA90 598 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 INTS13Q9NVM9 706 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 SUN1O94901 812 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 KRT14P02533 472 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 PDGFRBP09619 1106 aa13.88□□□□□ -0.19
PCDHA4-202ENST00000512229 CYP11B1P15538 503 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms