RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 MTRRQ9UBK8 725 aa13.35□□□□□ -0.27
COPS4-210ENST00000511708 C4orf47A7E2U8 309 aa13.34□□□□□ -0.27
COPS4-210ENST00000511708 AKAP3O75969 853 aa13.34□□□□□ -0.27
COPS4-210ENST00000511708 CEACAM1P13688 526 aa13.34□□□□□ -0.27
COPS4-210ENST00000511708 CSRP1P21291 193 aaKnown RBP13.34□□□□□ -0.27
COPS4-210ENST00000511708 AKAP5P24588 427 aa13.34□□□□□ -0.27
COPS4-210ENST00000511708 CCR2P41597 374 aa13.34□□□□□ -0.27
COPS4-210ENST00000511708 RBM25P49756 843 aaKnown RBP13.34□□□□□ -0.27
COPS4-210ENST00000511708 NPEPPSP55786 919 aa13.34□□□□□ -0.27
COPS4-210ENST00000511708 SPIRE1Q08AE8 756 aa13.34□□□□□ -0.27
COPS4-210ENST00000511708 ELAVL2Q12926 359 aaKnown RBP13.34□□□□□ -0.27
COPS4-210ENST00000511708 ZNF579Q8NAF0 562 aaKnown RBP13.34□□□□□ -0.27
COPS4-210ENST00000511708 RNF149Q8NC42 400 aa13.34□□□□□ -0.27
COPS4-210ENST00000511708 SLC7A3Q8WY07 619 aa13.34□□□□□ -0.27
COPS4-210ENST00000511708 SMARCD2Q92925 531 aa13.34□□□□□ -0.27
COPS4-210ENST00000511708 TMEM143Q96AN5 459 aa13.34□□□□□ -0.27
COPS4-210ENST00000511708 CPB2Q96IY4 423 aa13.34□□□□□ -0.27
COPS4-210ENST00000511708 LRRC2Q9BYS8 371 aa13.34□□□□□ -0.27
COPS4-210ENST00000511708 TRPV4Q9HBA0 871 aa13.34□□□□□ -0.27
COPS4-210ENST00000511708 NEUROG3Q9Y4Z2 214 aa13.34□□□□□ -0.27
COPS4-210ENST00000511708 RBM8AQ9Y5S9 174 aaKnown RBP13.34□□□□□ -0.27
COPS4-210ENST00000511708 TRIP11Q15643 1979 aa13.34□□□□□ -0.27
COPS4-210ENST00000511708 ACACAQ13085 2346 aa13.34□□□□□ -0.27
COPS4-210ENST00000511708 ABCA7Q8IZY2 2146 aa13.33□□□□□ -0.28
COPS4-210ENST00000511708 ZNF263O14978 683 aa13.33□□□□□ -0.28
COPS4-210ENST00000511708 SGSM2O43147 1006 aa13.33□□□□□ -0.28
COPS4-210ENST00000511708 ASAP2O43150 1006 aa13.33□□□□□ -0.28
COPS4-210ENST00000511708 CAPNS1P04632 268 aa13.33□□□□□ -0.28
COPS4-210ENST00000511708 GSPT1P15170 499 aaKnown RBP13.33□□□□□ -0.28
COPS4-210ENST00000511708 FGFR3P22607 806 aa13.33□□□□□ -0.28
COPS4-210ENST00000511708 CHMLP26374 656 aa13.33□□□□□ -0.28
COPS4-210ENST00000511708 PTENP60484 403 aa13.33□□□□□ -0.28
COPS4-210ENST00000511708 CCINQ13939 588 aa13.33□□□□□ -0.28
COPS4-210ENST00000511708 AMHR2Q16671 573 aa13.33□□□□□ -0.28
COPS4-210ENST00000511708 PFKFB3Q16875 520 aaPredicted RBP13.33□□□□□ -0.28
COPS4-210ENST00000511708 DAB2IPQ5VWQ8 1189 aa13.33□□□□□ -0.28
COPS4-210ENST00000511708 TXNDC11Q6PKC3 985 aa13.33□□□□□ -0.28
COPS4-210ENST00000511708 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.33□□□□□ -0.28
COPS4-210ENST00000511708 FERMT3Q86UX7 667 aa13.33□□□□□ -0.28
COPS4-210ENST00000511708 IFNLR1Q8IU57 520 aaPredicted RBP13.33□□□□□ -0.28
COPS4-210ENST00000511708 MFSD6LQ8IWD5 586 aa13.33□□□□□ -0.28
COPS4-210ENST00000511708 HACE1Q8IYU2 909 aa13.33□□□□□ -0.28
COPS4-210ENST00000511708 KIF12Q96FN5 646 aa13.33□□□□□ -0.28
COPS4-210ENST00000511708 CCDC136Q96JN2 1154 aa13.33□□□□□ -0.28
COPS4-210ENST00000511708 ZSWIM3Q96MP5 696 aa13.33□□□□□ -0.28
COPS4-210ENST00000511708 C8orf33Q9H7E9 229 aaPredicted RBP13.33□□□□□ -0.28
COPS4-210ENST00000511708 KLK14Q9P0G3 267 aa13.33□□□□□ -0.28
COPS4-210ENST00000511708 PPME1Q9Y570 386 aa13.33□□□□□ -0.28
COPS4-210ENST00000511708 MYBPHLA2RUH7 354 aa13.32□□□□□ -0.28
COPS4-210ENST00000511708 CASTOR2A6NHX0 329 aa13.32□□□□□ -0.28
COPS4-210ENST00000511708 ZNF197O14709 1029 aa13.32□□□□□ -0.28
COPS4-210ENST00000511708 MOSPD3O75425 235 aa13.32□□□□□ -0.28
COPS4-210ENST00000511708 ARF4P18085 180 aaPredicted RBP13.32□□□□□ -0.28
COPS4-210ENST00000511708 VIPR2P41587 438 aa13.32□□□□□ -0.28
COPS4-210ENST00000511708 SOX9P48436 509 aa13.32□□□□□ -0.28
COPS4-210ENST00000511708 PSMC5P62195 406 aa13.32□□□□□ -0.28
COPS4-210ENST00000511708 NAB2Q15742 525 aa13.32□□□□□ -0.28
COPS4-210ENST00000511708 RTN1Q16799 776 aa13.32□□□□□ -0.28
COPS4-210ENST00000511708 PLK5Q496M5 336 aa13.32□□□□□ -0.28
COPS4-210ENST00000511708 EXOC8Q8IYI6 725 aa13.32□□□□□ -0.28
COPS4-210ENST00000511708 SYNPOQ8N3V7 929 aa13.32□□□□□ -0.28
COPS4-210ENST00000511708 CORO1BQ9BR76 489 aa13.32□□□□□ -0.28
COPS4-210ENST00000511708 TRIM6Q9C030 488 aaPredicted RBP13.32□□□□□ -0.28
COPS4-210ENST00000511708 C6orf50Q9HD87 102 aa13.32□□□□□ -0.28
COPS4-210ENST00000511708 MSRB2Q9Y3D2 182 aa13.32□□□□□ -0.28
COPS4-210ENST00000511708 BACE2Q9Y5Z0 518 aa13.32□□□□□ -0.28
COPS4-210ENST00000511708 CDY1Q9Y6F8 540 aa13.32□□□□□ -0.28
COPS4-210ENST00000511708 LNP1A1A4G5 178 aa13.31□□□□□ -0.28
COPS4-210ENST00000511708 SLC38A8A6NNN8 435 aa13.31□□□□□ -0.28
COPS4-210ENST00000511708 SPECC1L-ADORA2AF8WAN1 911 aa13.31□□□□□ -0.28
COPS4-210ENST00000511708 PTGESO14684 152 aa13.31□□□□□ -0.28
COPS4-210ENST00000511708 EXTL3O43909 919 aa13.31□□□□□ -0.28
COPS4-210ENST00000511708 CTHP32929 405 aa13.31□□□□□ -0.28
COPS4-210ENST00000511708 RFC5P40937 340 aa13.31□□□□□ -0.28
COPS4-210ENST00000511708 PXNP49023 591 aaPredicted RBP13.31□□□□□ -0.28
COPS4-210ENST00000511708 USP11P51784 963 aa13.31□□□□□ -0.28
COPS4-210ENST00000511708 SYNE3Q6ZMZ3 975 aa13.31□□□□□ -0.28
COPS4-210ENST00000511708 CSGALNACT1Q8TDX6 532 aa13.31□□□□□ -0.28
COPS4-210ENST00000511708 GPSM3Q9Y4H4 160 aa13.31□□□□□ -0.28
COPS4-210ENST00000511708 NUP210Q8TEM1 1887 aaPredicted RBP13.31□□□□□ -0.28
COPS4-210ENST00000511708 CELSR3Q9NYQ7 3312 aa13.31□□□□□ -0.28
COPS4-210ENST00000511708 APC2O95996 2303 aa13.3□□□□□ -0.28
COPS4-210ENST00000511708 PI4KAP42356 2102 aa13.3□□□□□ -0.28
COPS4-210ENST00000511708 ASXL3Q9C0F0 2248 aa13.3□□□□□ -0.28
COPS4-210ENST00000511708 HEPACAM2A8MVW5 462 aa13.3□□□□□ -0.28
COPS4-210ENST00000511708 CHADO15335 359 aa13.3□□□□□ -0.28
COPS4-210ENST00000511708 ABLIM3O94929 683 aa13.3□□□□□ -0.28
COPS4-210ENST00000511708 LRG1P02750 347 aa13.3□□□□□ -0.28
COPS4-210ENST00000511708 CCDC192P0DO97 292 aa13.3□□□□□ -0.28
COPS4-210ENST00000511708 IGFBP6P24592 240 aaPredicted RBP13.3□□□□□ -0.28
COPS4-210ENST00000511708 CDC27P30260 824 aa13.3□□□□□ -0.28
COPS4-210ENST00000511708 MBTD1Q05BQ5 628 aa13.3□□□□□ -0.28
COPS4-210ENST00000511708 POU5F1BQ06416 359 aa13.3□□□□□ -0.28
COPS4-210ENST00000511708 FCHO2Q0JRZ9 810 aa13.3□□□□□ -0.28
COPS4-210ENST00000511708 Q4G0T1 1027 aa13.3□□□□□ -0.28
COPS4-210ENST00000511708 PKN3Q6P5Z2 889 aa13.3□□□□□ -0.28
COPS4-210ENST00000511708 SLC27A1Q6PCB7 646 aa13.3□□□□□ -0.28
COPS4-210ENST00000511708 PDZD3Q86UT5 571 aa13.3□□□□□ -0.28
COPS4-210ENST00000511708 RALGPS2Q86X27 583 aaPredicted RBP13.3□□□□□ -0.28
COPS4-210ENST00000511708 PROSER1Q86XN7 944 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms