RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 MYL10Q9BUA6 226 aa4.77□□□□□ -1.65
TOPBP1-208ENST00000511439 TRIM8Q9BZR9 551 aa4.77□□□□□ -1.65
TOPBP1-208ENST00000511439 VWA7Q9Y334 891 aa4.77□□□□□ -1.65
TOPBP1-208ENST00000511439 IFT172Q9UG01 1749 aa4.77□□□□□ -1.65
TOPBP1-208ENST00000511439 CPDO75976 1380 aa4.77□□□□□ -1.65
TOPBP1-208ENST00000511439 BTAF1O14981 1849 aa4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 PASKQ96RG2 1323 aa4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 CACNA1AO00555 2505 aa4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 GLTPD2A6NH11 291 aa4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 PPM1GO15355 546 aaPredicted RBP4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 SLC26A4O43511 780 aa4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 KDM1AO60341 852 aa4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 MSX2P35548 267 aaPredicted RBP4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 INHBCP55103 352 aa4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 MANFP55145 182 aaKnown RBP4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 ERVK-21P61565 698 aa4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 CD83Q01151 205 aa4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 ADCY2Q08462 1091 aa4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 FOXL1Q12952 345 aa4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 TUBA3CQ13748 450 aa4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 FAM50AQ14320 339 aaKnown RBP4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 GRM7Q14831 915 aa4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 SMN1Q16637 294 aaKnown RBP4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 TBR1Q16650 682 aa4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 KIAA1841Q6NSI8 718 aa4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 TUBA3EQ6PEY2 450 aa4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 UNQ6494/PRO21346Q6UXR6 183 aa4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 ANKARQ7Z5J8 1434 aa4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 CXorf67Q86X51 503 aaPredicted RBP4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 CMIPQ8IY22 773 aa4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 ZNF808Q8N4W9 903 aaPredicted RBP4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 IL17DQ8TAD2 202 aa4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 CACTINQ8WUQ7 758 aaKnown RBP4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 STAG1Q8WVM7 1258 aa4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 AHCYL2Q96HN2 611 aaKnown RBP4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 MPHOSPH9Q99550 1183 aa4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 ZNF703Q9H7S9 590 aaPredicted RBP4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 TLR9Q9NR96 1032 aa4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 HOMER2Q9NSB8 354 aa4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 TYW1Q9NV66 732 aaKnown RBP4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 CDC42EP3Q9UKI2 254 aa4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 GIT1Q9Y2X7 761 aa4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 COL18A1P39060 1754 aa4.76□□□□□ -1.65
TOPBP1-208ENST00000511439 KNDC1Q76NI1 1749 aa4.75□□□□□ -1.65
TOPBP1-208ENST00000511439 KATNA1O75449 491 aa4.75□□□□□ -1.65
TOPBP1-208ENST00000511439 APOL3O95236 402 aa4.75□□□□□ -1.65
TOPBP1-208ENST00000511439 ADH4P08319 380 aa4.75□□□□□ -1.65
TOPBP1-208ENST00000511439 MAKP20794 623 aa4.75□□□□□ -1.65
TOPBP1-208ENST00000511439 BCAR1P56945 870 aa4.75□□□□□ -1.65
TOPBP1-208ENST00000511439 SESN2P58004 480 aaPredicted RBP4.75□□□□□ -1.65
TOPBP1-208ENST00000511439 INHBEP58166 350 aa4.75□□□□□ -1.65
TOPBP1-208ENST00000511439 ZBTB41Q5SVQ8 909 aa4.75□□□□□ -1.65
TOPBP1-208ENST00000511439 TOM1L2Q6ZVM7 507 aa4.75□□□□□ -1.65
TOPBP1-208ENST00000511439 SGMS1Q86VZ5 419 aa4.75□□□□□ -1.65
TOPBP1-208ENST00000511439 SHCBP1Q8NEM2 672 aa4.75□□□□□ -1.65
TOPBP1-208ENST00000511439 LMBR1Q8WVP7 490 aa4.75□□□□□ -1.65
TOPBP1-208ENST00000511439 RPGRQ92834 1020 aaKnown RBP4.75□□□□□ -1.65
TOPBP1-208ENST00000511439 CHFRQ96EP1 664 aa4.75□□□□□ -1.65
TOPBP1-208ENST00000511439 ANO3Q9BYT9 981 aa4.75□□□□□ -1.65
TOPBP1-208ENST00000511439 C14orf119Q9NWQ9 140 aa4.75□□□□□ -1.65
TOPBP1-208ENST00000511439 DDX56Q9NY93 547 aaKnown RBP4.75□□□□□ -1.65
TOPBP1-208ENST00000511439 KCMF1Q9P0J7 381 aa4.75□□□□□ -1.65
TOPBP1-208ENST00000511439 C11orf21Q9P2W6 132 aa4.75□□□□□ -1.65
TOPBP1-208ENST00000511439 KCNG1Q9UIX4 513 aa4.75□□□□□ -1.65
TOPBP1-208ENST00000511439 FAM184BQ9ULE4 1060 aa4.75□□□□□ -1.65
TOPBP1-208ENST00000511439 PPP2R3BQ9Y5P8 575 aa4.75□□□□□ -1.65
TOPBP1-208ENST00000511439 E9PCH4 1651 aa4.75□□□□□ -1.65
TOPBP1-208ENST00000511439 ABCC6O95255 1503 aa4.75□□□□□ -1.65
TOPBP1-208ENST00000511439 ANKRD30AQ9BXX3 1397 aa4.75□□□□□ -1.65
TOPBP1-208ENST00000511439 SZT2Q5T011 3432 aa4.74□□□□□ -1.65
TOPBP1-208ENST00000511439 QRICH2Q9H0J4 1663 aa4.74□□□□□ -1.65
TOPBP1-208ENST00000511439 RGPD8O14715 1765 aaPredicted RBP4.74□□□□□ -1.65
TOPBP1-208ENST00000511439 PRSS38A1L453 326 aa4.74□□□□□ -1.65
TOPBP1-208ENST00000511439 EXOC5O00471 708 aa4.74□□□□□ -1.65
TOPBP1-208ENST00000511439 PFKMP08237 780 aa4.74□□□□□ -1.65
TOPBP1-208ENST00000511439 C1SP09871 688 aa4.74□□□□□ -1.65
TOPBP1-208ENST00000511439 SCAND1P57086 179 aa4.74□□□□□ -1.65
TOPBP1-208ENST00000511439 EXOSC10Q01780 885 aaKnown RBP4.74□□□□□ -1.65
TOPBP1-208ENST00000511439 HGFACQ04756 655 aa4.74□□□□□ -1.65
TOPBP1-208ENST00000511439 ITKQ08881 620 aa4.74□□□□□ -1.65
TOPBP1-208ENST00000511439 FSCN1Q16658 493 aaKnown RBP4.74□□□□□ -1.65
TOPBP1-208ENST00000511439 INAVAQ3KP66 663 aa4.74□□□□□ -1.65
TOPBP1-208ENST00000511439 BRDTQ58F21 947 aaPredicted RBP4.74□□□□□ -1.65
TOPBP1-208ENST00000511439 BCL6BQ8N143 479 aaPredicted RBP4.74□□□□□ -1.65
TOPBP1-208ENST00000511439 D2HGDHQ8N465 521 aa4.74□□□□□ -1.65
TOPBP1-208ENST00000511439 ACAP3Q96P50 834 aa4.74□□□□□ -1.65
TOPBP1-208ENST00000511439 CEP89Q96ST8 783 aa4.74□□□□□ -1.65
TOPBP1-208ENST00000511439 PITHD1Q9GZP4 211 aaPredicted RBP4.74□□□□□ -1.65
TOPBP1-208ENST00000511439 WNT8AQ9H1J5 351 aa4.74□□□□□ -1.65
TOPBP1-208ENST00000511439 MTG2Q9H4K7 406 aa4.74□□□□□ -1.65
TOPBP1-208ENST00000511439 PARPBPQ9NWS1 579 aa4.74□□□□□ -1.65
TOPBP1-208ENST00000511439 TMPRSS11EQ9UL52 423 aa4.74□□□□□ -1.65
TOPBP1-208ENST00000511439 DENND2AQ9ULE3 1009 aa4.74□□□□□ -1.65
TOPBP1-208ENST00000511439 ABT1Q9ULW3 272 aaKnown RBP4.74□□□□□ -1.65
TOPBP1-208ENST00000511439 MYPNQ86TC9 1320 aa4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 A0A0A6YYJ9 748 aa4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 GOLGA8AA7E2F4 631 aa4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 GOLGA8BA8MQT2 603 aa4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 CAPN14A8MX76 684 aa4.73□□□□□ -1.65
TOPBP1-208ENST00000511439 MAFGO15525 162 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms