RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 ABCD1P33897 745 aa12.68□□□□□ -0.38
SH3RF1-205ENST00000511421 TNFSF9P41273 254 aa12.68□□□□□ -0.38
SH3RF1-205ENST00000511421 ITIH3Q06033 890 aa12.68□□□□□ -0.38
SH3RF1-205ENST00000511421 CBX2Q14781 532 aaPredicted RBP12.68□□□□□ -0.38
SH3RF1-205ENST00000511421 ZBTB41Q5SVQ8 909 aa12.68□□□□□ -0.38
SH3RF1-205ENST00000511421 FAM171A1Q5VUB5 890 aa12.68□□□□□ -0.38
SH3RF1-205ENST00000511421 KANK3Q6NY19 840 aa12.68□□□□□ -0.38
SH3RF1-205ENST00000511421 C3orf58Q8NDZ4 430 aa12.68□□□□□ -0.38
SH3RF1-205ENST00000511421 FEZF2Q8TBJ5 459 aa12.68□□□□□ -0.38
SH3RF1-205ENST00000511421 FBXL18Q96ME1 805 aa12.68□□□□□ -0.38
SH3RF1-205ENST00000511421 POP1Q99575 1024 aaKnown RBP12.68□□□□□ -0.38
SH3RF1-205ENST00000511421 PHF7Q9BWX1 381 aaPredicted RBP12.68□□□□□ -0.38
SH3RF1-205ENST00000511421 EPHX3Q9H6B9 360 aa12.68□□□□□ -0.38
SH3RF1-205ENST00000511421 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.68□□□□□ -0.38
SH3RF1-205ENST00000511421 SLC38A7Q9NVC3 462 aa12.68□□□□□ -0.38
SH3RF1-205ENST00000511421 KBTBD4Q9NVX7 518 aa12.68□□□□□ -0.38
SH3RF1-205ENST00000511421 FNIP2Q9P278 1114 aa12.68□□□□□ -0.38
SH3RF1-205ENST00000511421 CFAP45Q9UL16 551 aa12.68□□□□□ -0.38
SH3RF1-205ENST00000511421 TTC26A0AVF1 554 aa12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 LOC730098B7Z3J9 87 aa12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 TISP43B9A030 160 aa12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 OGTO15294 1046 aa12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 B3GAT3O94766 335 aa12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 ADH1AP07327 375 aa12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 ADRB2P07550 413 aa12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 CXCL8P10145 99 aa12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 MATR3P43243 847 aaKnown RBP eCLIP12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 ELAVL2Q12926 359 aaKnown RBP12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 RARS2Q5T160 578 aaKnown RBP12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 PRSS55Q6UWB4 352 aaPredicted RBP12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 PIK3R5Q8WYR1 880 aa12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 STAMQ92783 540 aa12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 C18orf25Q96B23 403 aaPredicted RBP12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 DDX27Q96GQ7 796 aaKnown RBP12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 TTPALQ9BTX7 342 aa12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 TNMDQ9H2S6 317 aa12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 IKZF4Q9H2S9 585 aa12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 PLEKHA5Q9HAU0 1116 aa12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 OLFML3Q9NRN5 406 aa12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 TBC1D7Q9P0N9 293 aa12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 STYXL1Q9Y6J8 313 aa12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 PI4K2BG5E9Z4 385 aa12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 IDEP14735 1019 aa12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 RPL17P18621 184 aaKnown RBP12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 FGFR3P22607 806 aa12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 ME1P48163 572 aa12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 KCNA1Q09470 495 aa12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 ENOX2Q16206 610 aaKnown RBP12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 KYAT1Q16773 422 aa12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 HERC4Q5GLZ8 1057 aaPredicted RBP12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 RESP18Q5W5W9 173 aa12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 LILRA6Q6PI73 481 aa12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 LNX1Q8TBB1 728 aaPredicted RBP12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 DHX58Q96C10 678 aa12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 HVCN1Q96D96 273 aa12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 CHAMP1Q96JM3 812 aa12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 FGFBP2Q9BYJ0 223 aa12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 CUEDC2Q9H467 287 aa12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 MRPL44Q9H9J2 332 aaKnown RBP12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 PANK4Q9NVE7 773 aa12.67□□□□□ -0.38
SH3RF1-205ENST00000511421 CITO14578 2027 aa12.66□□□□□ -0.38
SH3RF1-205ENST00000511421 LACTBL1A8MY62 500 aa12.66□□□□□ -0.38
SH3RF1-205ENST00000511421 PODXLO00592 558 aa12.66□□□□□ -0.38
SH3RF1-205ENST00000511421 GLUD1P00367 558 aa12.66□□□□□ -0.38
SH3RF1-205ENST00000511421 C1RP00736 705 aa12.66□□□□□ -0.38
SH3RF1-205ENST00000511421 WEE2P0C1S8 567 aa12.66□□□□□ -0.38
SH3RF1-205ENST00000511421 RPL9P32969 192 aaKnown RBP12.66□□□□□ -0.38
SH3RF1-205ENST00000511421 BRCC3P46736 316 aa12.66□□□□□ -0.38
SH3RF1-205ENST00000511421 CASP5P51878 434 aa12.66□□□□□ -0.38
SH3RF1-205ENST00000511421 CREMQ03060 361 aa12.66□□□□□ -0.38
SH3RF1-205ENST00000511421 ZBTB6Q15916 424 aa12.66□□□□□ -0.38
SH3RF1-205ENST00000511421 CES5AQ6NT32 575 aa12.66□□□□□ -0.38
SH3RF1-205ENST00000511421 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.66□□□□□ -0.38
SH3RF1-205ENST00000511421 CEP57Q86XR8 500 aa12.66□□□□□ -0.38
SH3RF1-205ENST00000511421 TMEM130Q8N3G9 435 aa12.66□□□□□ -0.38
SH3RF1-205ENST00000511421 IQUBQ8NA54 791 aa12.66□□□□□ -0.38
SH3RF1-205ENST00000511421 CLSTN3Q9BQT9 956 aa12.66□□□□□ -0.38
SH3RF1-205ENST00000511421 MSTO1Q9BUK6 570 aa12.66□□□□□ -0.38
SH3RF1-205ENST00000511421 TRIM9Q9C026 710 aa12.66□□□□□ -0.38
SH3RF1-205ENST00000511421 POMKQ9H5K3 350 aa12.66□□□□□ -0.38
SH3RF1-205ENST00000511421 SFXN1Q9H9B4 322 aa12.66□□□□□ -0.38
SH3RF1-205ENST00000511421 MAN1C1Q9NR34 630 aa12.66□□□□□ -0.38
SH3RF1-205ENST00000511421 TUBGCP4Q9UGJ1 667 aa12.66□□□□□ -0.38
SH3RF1-205ENST00000511421 CPSF3Q9UKF6 684 aaKnown RBP12.66□□□□□ -0.38
SH3RF1-205ENST00000511421 I3L4J1 428 aa12.65□□□□□ -0.38
SH3RF1-205ENST00000511421 POLR2DO15514 142 aaKnown RBP12.65□□□□□ -0.38
SH3RF1-205ENST00000511421 TGM5O43548 720 aa12.65□□□□□ -0.38
SH3RF1-205ENST00000511421 MYBP10242 640 aa12.65□□□□□ -0.38
SH3RF1-205ENST00000511421 ADSSP30520 456 aa12.65□□□□□ -0.38
SH3RF1-205ENST00000511421 MTHFRP42898 656 aa12.65□□□□□ -0.38
SH3RF1-205ENST00000511421 SPAG1Q07617 926 aa12.65□□□□□ -0.38
SH3RF1-205ENST00000511421 PSMD5Q16401 504 aa12.65□□□□□ -0.38
SH3RF1-205ENST00000511421 L1TD1Q5T7N2 865 aaKnown RBP12.65□□□□□ -0.38
SH3RF1-205ENST00000511421 SLFN12LQ6IEE8 588 aa12.65□□□□□ -0.38
SH3RF1-205ENST00000511421 CNNM4Q6P4Q7 775 aa12.65□□□□□ -0.38
SH3RF1-205ENST00000511421 TMC5Q6UXY8 1006 aa12.65□□□□□ -0.38
SH3RF1-205ENST00000511421 GPR149Q86SP6 731 aa12.65□□□□□ -0.38
SH3RF1-205ENST00000511421 PALB2Q86YC2 1186 aa12.65□□□□□ -0.38
SH3RF1-205ENST00000511421 RNF135Q8IUD6 432 aa12.65□□□□□ -0.38
SH3RF1-205ENST00000511421 GLYCTKQ8IVS8 523 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms