RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 CDCA3Q99618 268 aaPredicted RBP15.24■□□□□ 0.03
DDX41-212ENST00000511040 PYM1Q9BRP8 204 aaKnown RBP15.24■□□□□ 0.03
DDX41-212ENST00000511040 COL25A1Q9BXS0 654 aaPredicted RBP15.24■□□□□ 0.03
DDX41-212ENST00000511040 CLEC1BQ9P126 229 aa15.24■□□□□ 0.03
DDX41-212ENST00000511040 CNTN3Q9P232 1028 aa15.24■□□□□ 0.03
DDX41-212ENST00000511040 EXOC7Q9UPT5 735 aa15.24■□□□□ 0.03
DDX41-212ENST00000511040 PCDHB13Q9Y5F0 798 aa15.24■□□□□ 0.03
DDX41-212ENST00000511040 A0A1W2PQ27 194 aa15.23■□□□□ 0.03
DDX41-212ENST00000511040 A0A1W2PQ64 194 aa15.23■□□□□ 0.03
DDX41-212ENST00000511040 A0A1W2PQD8 194 aa15.23■□□□□ 0.03
DDX41-212ENST00000511040 LACTBL1A8MY62 500 aa15.23■□□□□ 0.03
DDX41-212ENST00000511040 EFEMP2O95967 443 aa15.23■□□□□ 0.03
DDX41-212ENST00000511040 GLUD2P49448 558 aa15.23■□□□□ 0.03
DDX41-212ENST00000511040 ACOT2P49753 483 aa15.23■□□□□ 0.03
DDX41-212ENST00000511040 SLFN12LQ6IEE8 588 aa15.23■□□□□ 0.03
DDX41-212ENST00000511040 KIAA1841Q6NSI8 718 aa15.23■□□□□ 0.03
DDX41-212ENST00000511040 CNNM4Q6P4Q7 775 aa15.23■□□□□ 0.03
DDX41-212ENST00000511040 UNC13DQ70J99 1090 aa15.23■□□□□ 0.03
DDX41-212ENST00000511040 RNF168Q8IYW5 571 aaPredicted RBP15.23■□□□□ 0.03
DDX41-212ENST00000511040 POMGNT1Q8WZA1 660 aa15.23■□□□□ 0.03
DDX41-212ENST00000511040 APOL5Q9BWW9 433 aa15.23■□□□□ 0.03
DDX41-212ENST00000511040 RPF1Q9H9Y2 349 aaKnown RBP15.23■□□□□ 0.03
DDX41-212ENST00000511040 MRPL17Q9NRX2 175 aaKnown RBP15.23■□□□□ 0.03
DDX41-212ENST00000511040 TUBGCP4Q9UGJ1 667 aa15.23■□□□□ 0.03
DDX41-212ENST00000511040 CD207Q9UJ71 328 aa15.23■□□□□ 0.03
DDX41-212ENST00000511040 AGO2Q9UKV8 859 aaKnown RBP15.23■□□□□ 0.03
DDX41-212ENST00000511040 SF3B1O75533 1304 aaKnown RBP eCLIP15.22■□□□□ 0.034e-7■■■■■ 133.7
DDX41-212ENST00000511040 TTC26A0AVF1 554 aa15.22■□□□□ 0.03
DDX41-212ENST00000511040 I3L4J1 428 aa15.22■□□□□ 0.03
DDX41-212ENST00000511040 DLL1O00548 723 aa15.22■□□□□ 0.03
DDX41-212ENST00000511040 LILRB3O75022 631 aa15.22■□□□□ 0.03
DDX41-212ENST00000511040 B3GAT3O94766 335 aa15.22■□□□□ 0.03
DDX41-212ENST00000511040 CNPP09543 421 aaKnown RBP15.22■□□□□ 0.03
DDX41-212ENST00000511040 IL9P15248 144 aa15.22■□□□□ 0.03
DDX41-212ENST00000511040 ADSSP30520 456 aa15.22■□□□□ 0.03
DDX41-212ENST00000511040 ANP32AP39687 249 aaKnown RBP15.22■□□□□ 0.03
DDX41-212ENST00000511040 GUCY2FP51841 1108 aa15.22■□□□□ 0.03
DDX41-212ENST00000511040 PPP2R3AQ06190 1150 aa15.22■□□□□ 0.03
DDX41-212ENST00000511040 ALCAMQ13740 583 aa15.22■□□□□ 0.03
DDX41-212ENST00000511040 UPP1Q16831 310 aa15.22■□□□□ 0.03
DDX41-212ENST00000511040 FAM26FQ5R3K3 315 aa15.22■□□□□ 0.03
DDX41-212ENST00000511040 FAM171A1Q5VUB5 890 aa15.22■□□□□ 0.03
DDX41-212ENST00000511040 CD300LGQ6UXG3 332 aa15.22■□□□□ 0.03
DDX41-212ENST00000511040 CEP57Q86XR8 500 aa15.22■□□□□ 0.03
DDX41-212ENST00000511040 C3orf58Q8NDZ4 430 aa15.22■□□□□ 0.03
DDX41-212ENST00000511040 ZSWIM2Q8NEG5 633 aa15.22■□□□□ 0.03
DDX41-212ENST00000511040 NOC3LQ8WTT2 800 aaKnown RBP15.22■□□□□ 0.03
DDX41-212ENST00000511040 RIN2Q8WYP3 895 aaPredicted RBP15.22■□□□□ 0.03
DDX41-212ENST00000511040 KIF12Q96FN5 646 aa15.22■□□□□ 0.03
DDX41-212ENST00000511040 MSLNLQ96KJ4 702 aa15.22■□□□□ 0.03
DDX41-212ENST00000511040 KLHL5Q96PQ7 755 aa15.22■□□□□ 0.03
DDX41-212ENST00000511040 SLC38A7Q9NVC3 462 aa15.22■□□□□ 0.03
DDX41-212ENST00000511040 CPSF3Q9UKF6 684 aaKnown RBP15.22■□□□□ 0.03
DDX41-212ENST00000511040 HCFC2Q9Y5Z7 792 aa15.22■□□□□ 0.03
DDX41-212ENST00000511040 STYXL1Q9Y6J8 313 aa15.22■□□□□ 0.03
DDX41-212ENST00000511040 XIRP2A4UGR9 3374 aa15.22■□□□□ 0.03
DDX41-212ENST00000511040 FAM237AA0A1B0GTK4 181 aa15.21■□□□□ 0.03
DDX41-212ENST00000511040 GRXCR2A6NFK2 248 aa15.21■□□□□ 0.03
DDX41-212ENST00000511040 PODXLO00592 558 aa15.21■□□□□ 0.03
DDX41-212ENST00000511040 PRR29P0C7W0 189 aa15.21■□□□□ 0.03
DDX41-212ENST00000511040 EPCAMP16422 314 aa15.21■□□□□ 0.03
DDX41-212ENST00000511040 RPL17P18621 184 aaKnown RBP15.21■□□□□ 0.03
DDX41-212ENST00000511040 KLRC2P26717 231 aa15.21■□□□□ 0.03
DDX41-212ENST00000511040 HOXD13P35453 343 aa15.21■□□□□ 0.03
DDX41-212ENST00000511040 DSG1Q02413 1049 aa15.21■□□□□ 0.03
DDX41-212ENST00000511040 KCNC3Q14003 757 aa15.21■□□□□ 0.03
DDX41-212ENST00000511040 KYAT1Q16773 422 aa15.21■□□□□ 0.03
DDX41-212ENST00000511040 USP41Q3LFD5 358 aa15.21■□□□□ 0.03
DDX41-212ENST00000511040 RTP2Q5QGT7 225 aa15.21■□□□□ 0.03
DDX41-212ENST00000511040 KIAA0319Q5VV43 1072 aa15.21■□□□□ 0.03
DDX41-212ENST00000511040 DCLRE1AQ6PJP8 1040 aa15.21■□□□□ 0.03
DDX41-212ENST00000511040 PRSS55Q6UWB4 352 aaPredicted RBP15.21■□□□□ 0.03
DDX41-212ENST00000511040 STXBP4Q6ZWJ1 553 aa15.21■□□□□ 0.03
DDX41-212ENST00000511040 GLYCTKQ8IVS8 523 aa15.21■□□□□ 0.03
DDX41-212ENST00000511040 NELFCDQ8IXH7 590 aa15.21■□□□□ 0.03
DDX41-212ENST00000511040 SLC22A17Q8WUG5 538 aa15.21■□□□□ 0.03
DDX41-212ENST00000511040 SAAL1Q96ER3 474 aa15.21■□□□□ 0.03
DDX41-212ENST00000511040 UROC1Q96N76 676 aa15.21■□□□□ 0.03
DDX41-212ENST00000511040 CBWD1Q9BRT8 395 aa15.21■□□□□ 0.03
DDX41-212ENST00000511040 FAM213AQ9BRX8 229 aa15.21■□□□□ 0.03
DDX41-212ENST00000511040 EMILIN2Q9BXX0 1053 aa15.21■□□□□ 0.03
DDX41-212ENST00000511040 PCIF1Q9H4Z3 704 aa15.21■□□□□ 0.03
DDX41-212ENST00000511040 PLEKHA5Q9HAU0 1116 aa15.21■□□□□ 0.03
DDX41-212ENST00000511040 SLC39A2Q9NP94 309 aa15.21■□□□□ 0.03
DDX41-212ENST00000511040 STK39Q9UEW8 545 aa15.21■□□□□ 0.03
DDX41-212ENST00000511040 USP25Q9UHP3 1055 aa15.21■□□□□ 0.03
DDX41-212ENST00000511040 IRAK3Q9Y616 596 aa15.21■□□□□ 0.03
DDX41-212ENST00000511040 PDCD11Q14690 1871 aaKnown RBP15.2■□□□□ 0.02
DDX41-212ENST00000511040 GOLGA8IPA6NC78 632 aa15.2■□□□□ 0.02
DDX41-212ENST00000511040 GOLGA8JA6NMD2 632 aa15.2■□□□□ 0.02
DDX41-212ENST00000511040 TEX28O15482 410 aa15.2■□□□□ 0.02
DDX41-212ENST00000511040 KLRC4O43908 158 aa15.2■□□□□ 0.02
DDX41-212ENST00000511040 NFICP08651 508 aa15.2■□□□□ 0.02
DDX41-212ENST00000511040 SRGAP2BP0DMP2 458 aa15.2■□□□□ 0.02
DDX41-212ENST00000511040 BRCC3P46736 316 aa15.2■□□□□ 0.02
DDX41-212ENST00000511040 POSTNQ15063 836 aa15.2■□□□□ 0.02
DDX41-212ENST00000511040 JADE1Q6IE81 842 aa15.2■□□□□ 0.02
DDX41-212ENST00000511040 ANKRD54Q6NXT1 300 aa15.2■□□□□ 0.02
DDX41-212ENST00000511040 KANK3Q6NY19 840 aa15.2■□□□□ 0.02
DDX41-212ENST00000511040 CRELD2Q6UXH1 353 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms