RNA–Protein interactions for RNA: ENST00000509177.1

TUSC3-208, Transcript of tumor suppressor candidate 3, humanhuman

TSL 2

Gene TUSC3, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-208ENST00000509177 GPBP1Q86WP2 473 aa11.88□□□□□ -0.51
TUSC3-208ENST00000509177 CEP57Q86XR8 500 aa11.88□□□□□ -0.51
TUSC3-208ENST00000509177 PALB2Q86YC2 1186 aa11.88□□□□□ -0.51
TUSC3-208ENST00000509177 GLYCTKQ8IVS8 523 aa11.88□□□□□ -0.51
TUSC3-208ENST00000509177 DTWD2Q8NBA8 298 aa11.88□□□□□ -0.51
TUSC3-208ENST00000509177 SPIRE2Q8WWL2 714 aa11.88□□□□□ -0.51
TUSC3-208ENST00000509177 ACAP3Q96P50 834 aa11.88□□□□□ -0.51
TUSC3-208ENST00000509177 PAAF1Q9BRP4 392 aa11.88□□□□□ -0.51
TUSC3-208ENST00000509177 CDT1Q9H211 546 aa11.88□□□□□ -0.51
TUSC3-208ENST00000509177 ZHX3Q9H4I2 956 aa11.88□□□□□ -0.51
TUSC3-208ENST00000509177 MAN1C1Q9NR34 630 aa11.88□□□□□ -0.51
TUSC3-208ENST00000509177 LARSQ9P2J5 1176 aaKnown RBP11.88□□□□□ -0.51
TUSC3-208ENST00000509177 FBXL21Q9UKT6 434 aa11.88□□□□□ -0.51
TUSC3-208ENST00000509177 CLIC4Q9Y696 253 aa11.88□□□□□ -0.51
TUSC3-208ENST00000509177 CEP250Q9BV73 2442 aa11.87□□□□□ -0.51
TUSC3-208ENST00000509177 H0YCG3 227 aa11.87□□□□□ -0.51
TUSC3-208ENST00000509177 K7ELQ4 463 aaPredicted RBP11.87□□□□□ -0.51
TUSC3-208ENST00000509177 NARSO43776 548 aaKnown RBP11.87□□□□□ -0.51
TUSC3-208ENST00000509177 SPATA31D3P0C874 917 aa11.87□□□□□ -0.51
TUSC3-208ENST00000509177 MCF2P10911 925 aa11.87□□□□□ -0.51
TUSC3-208ENST00000509177 RPL17P18621 184 aaKnown RBP11.87□□□□□ -0.51
TUSC3-208ENST00000509177 MARCKSP29966 332 aaPredicted RBP11.87□□□□□ -0.51
TUSC3-208ENST00000509177 GRM5P41594 1212 aa11.87□□□□□ -0.51
TUSC3-208ENST00000509177 KARSQ15046 597 aaKnown RBP11.87□□□□□ -0.51
TUSC3-208ENST00000509177 DCLRE1AQ6PJP8 1040 aa11.87□□□□□ -0.51
TUSC3-208ENST00000509177 MPZL3Q6UWV2 235 aa11.87□□□□□ -0.51
TUSC3-208ENST00000509177 SPATA31D4Q6ZUB0 917 aa11.87□□□□□ -0.51
TUSC3-208ENST00000509177 TAS1R3Q7RTX0 852 aa11.87□□□□□ -0.51
TUSC3-208ENST00000509177 MYCT1Q8N699 235 aa11.87□□□□□ -0.51
TUSC3-208ENST00000509177 INTS4Q96HW7 963 aaKnown RBP11.87□□□□□ -0.51
TUSC3-208ENST00000509177 RTP3Q9BQQ7 232 aa11.87□□□□□ -0.51
TUSC3-208ENST00000509177 NTPCRQ9BSD7 190 aaKnown RBP11.87□□□□□ -0.51
TUSC3-208ENST00000509177 TTPALQ9BTX7 342 aa11.87□□□□□ -0.51
TUSC3-208ENST00000509177 CXCL16Q9H2A7 254 aa11.87□□□□□ -0.51
TUSC3-208ENST00000509177 RXFP1Q9HBX9 757 aa11.87□□□□□ -0.51
TUSC3-208ENST00000509177 CHST7Q9NS84 486 aa11.87□□□□□ -0.51
TUSC3-208ENST00000509177 ANKFY1Q9P2R3 1169 aa11.87□□□□□ -0.51
TUSC3-208ENST00000509177 SMIM28A0A1B0GU29 152 aa11.86□□□□□ -0.51
TUSC3-208ENST00000509177 KRBA1A5PL33 1030 aa11.86□□□□□ -0.51
TUSC3-208ENST00000509177 CLDN3O15551 220 aa11.86□□□□□ -0.51
TUSC3-208ENST00000509177 TRAPPC3O43617 180 aa11.86□□□□□ -0.51
TUSC3-208ENST00000509177 TBCAO75347 108 aaKnown RBP11.86□□□□□ -0.51
TUSC3-208ENST00000509177 TOM1L1O75674 476 aa11.86□□□□□ -0.51
TUSC3-208ENST00000509177 B3GAT3O94766 335 aa11.86□□□□□ -0.51
TUSC3-208ENST00000509177 KIF4AO95239 1232 aa11.86□□□□□ -0.51
TUSC3-208ENST00000509177 EFEMP2O95967 443 aa11.86□□□□□ -0.51
TUSC3-208ENST00000509177 HSP90AA1P07900 732 aaKnown RBP11.86□□□□□ -0.51
TUSC3-208ENST00000509177 MAPTP10636 758 aaKnown RBP11.86□□□□□ -0.51
TUSC3-208ENST00000509177 PLCG1P19174 1290 aa11.86□□□□□ -0.51
TUSC3-208ENST00000509177 TXLNAP40222 546 aa11.86□□□□□ -0.51
TUSC3-208ENST00000509177 GRIN1Q05586 938 aa11.86□□□□□ -0.51
TUSC3-208ENST00000509177 MCM6Q14566 821 aa11.86□□□□□ -0.51
TUSC3-208ENST00000509177 SPECC1Q5M775 1068 aa11.86□□□□□ -0.51
TUSC3-208ENST00000509177 PDXDC1Q6P996 788 aa11.86□□□□□ -0.51
TUSC3-208ENST00000509177 PRSS55Q6UWB4 352 aaPredicted RBP11.86□□□□□ -0.51
TUSC3-208ENST00000509177 GPR65Q8IYL9 337 aa11.86□□□□□ -0.51
TUSC3-208ENST00000509177 RNF168Q8IYW5 571 aaPredicted RBP11.86□□□□□ -0.51
TUSC3-208ENST00000509177 CEP120Q8N960 986 aa11.86□□□□□ -0.51
TUSC3-208ENST00000509177 TMEM161BQ8NDZ6 487 aa11.86□□□□□ -0.51
TUSC3-208ENST00000509177 RSAD2Q8WXG1 361 aa11.86□□□□□ -0.51
TUSC3-208ENST00000509177 RAD54LQ92698 747 aa11.86□□□□□ -0.51
TUSC3-208ENST00000509177 ZBTB45Q96K62 511 aaPredicted RBP11.86□□□□□ -0.51
TUSC3-208ENST00000509177 UROC1Q96N76 676 aa11.86□□□□□ -0.51
TUSC3-208ENST00000509177 PIDD1Q9HB75 910 aa11.86□□□□□ -0.51
TUSC3-208ENST00000509177 PTPRHQ9HD43 1115 aa11.86□□□□□ -0.51
TUSC3-208ENST00000509177 SLC38A7Q9NVC3 462 aa11.86□□□□□ -0.51
TUSC3-208ENST00000509177 FNIP2Q9P278 1114 aa11.86□□□□□ -0.51
TUSC3-208ENST00000509177 IGSF9Q9P2J2 1179 aa11.86□□□□□ -0.51
TUSC3-208ENST00000509177 CCDC39Q9UFE4 941 aa11.86□□□□□ -0.51
TUSC3-208ENST00000509177 ODF2LQ9ULJ1 636 aa11.86□□□□□ -0.51
TUSC3-208ENST00000509177 SSUH2Q9Y2M2 353 aa11.86□□□□□ -0.51
TUSC3-208ENST00000509177 OTOGLQ3ZCN5 2332 aa11.86□□□□□ -0.51
TUSC3-208ENST00000509177 CCDC195A0A1B0GUA6 201 aa11.85□□□□□ -0.51
TUSC3-208ENST00000509177 K7ENM7 598 aa11.85□□□□□ -0.51
TUSC3-208ENST00000509177 TGM5O43548 720 aa11.85□□□□□ -0.51
TUSC3-208ENST00000509177 CFHP08603 1231 aa11.85□□□□□ -0.51
TUSC3-208ENST00000509177 LIG4P49917 911 aa11.85□□□□□ -0.51
TUSC3-208ENST00000509177 CLCNKBP51801 687 aa11.85□□□□□ -0.51
TUSC3-208ENST00000509177 RESTQ13127 1097 aa11.85□□□□□ -0.51
TUSC3-208ENST00000509177 NOLC1Q14978 699 aaKnown RBP eCLIP11.85□□□□□ -0.51
TUSC3-208ENST00000509177 NAB2Q15742 525 aa11.85□□□□□ -0.51
TUSC3-208ENST00000509177 PSMD5Q16401 504 aa11.85□□□□□ -0.51
TUSC3-208ENST00000509177 ARSHQ5FYA8 562 aa11.85□□□□□ -0.51
TUSC3-208ENST00000509177 RTP2Q5QGT7 225 aa11.85□□□□□ -0.51
TUSC3-208ENST00000509177 FAM173BQ6P4H8 233 aa11.85□□□□□ -0.51
TUSC3-208ENST00000509177 C15orf39Q6ZRI6 1047 aa11.85□□□□□ -0.51
TUSC3-208ENST00000509177 HAUS6Q7Z4H7 955 aa11.85□□□□□ -0.51
TUSC3-208ENST00000509177 KRI1Q8N9T8 703 aaKnown RBP11.85□□□□□ -0.51
TUSC3-208ENST00000509177 HDAC7Q8WUI4 952 aa11.85□□□□□ -0.51
TUSC3-208ENST00000509177 LARP4BQ92615 738 aaKnown RBP11.85□□□□□ -0.51
TUSC3-208ENST00000509177 RMDN1Q96DB5 314 aa11.85□□□□□ -0.51
TUSC3-208ENST00000509177 DDX27Q96GQ7 796 aaKnown RBP11.85□□□□□ -0.51
TUSC3-208ENST00000509177 PPP1R10Q96QC0 940 aaKnown RBP11.85□□□□□ -0.51
TUSC3-208ENST00000509177 REEP2Q9BRK0 252 aa11.85□□□□□ -0.51
TUSC3-208ENST00000509177 PLEKHA4Q9H4M7 779 aa11.85□□□□□ -0.51
TUSC3-208ENST00000509177 PARVGQ9HBI0 331 aa11.85□□□□□ -0.51
TUSC3-208ENST00000509177 EPG5Q9HCE0 2579 aa11.85□□□□□ -0.51
TUSC3-208ENST00000509177 TDRD15B5MCY1 1934 aaKnown RBP11.84□□□□□ -0.51
TUSC3-208ENST00000509177 MED19A0JLT2 244 aaPredicted RBP11.84□□□□□ -0.51
TUSC3-208ENST00000509177 STX6O43752 255 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms