RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 ACOT2P49753 483 aa9.91□□□□□ -0.82
HTT-205ENST00000509043 PTENP60484 403 aa9.91□□□□□ -0.82
HTT-205ENST00000509043 ARHGAP1Q07960 439 aa9.91□□□□□ -0.82
HTT-205ENST00000509043 PCBP1Q15365 356 aaKnown RBP eCLIP9.91□□□□□ -0.82
HTT-205ENST00000509043 CCL15Q16663 113 aa9.91□□□□□ -0.82
HTT-205ENST00000509043 FAM110CQ1W6H9 321 aa9.91□□□□□ -0.82
HTT-205ENST00000509043 SGSM1Q2NKQ1 1148 aa9.91□□□□□ -0.82
HTT-205ENST00000509043 ALS2CLQ60I27 953 aa9.91□□□□□ -0.82
HTT-205ENST00000509043 EEPD1Q7L9B9 569 aa9.91□□□□□ -0.82
HTT-205ENST00000509043 APBB1IPQ7Z5R6 666 aaPredicted RBP9.91□□□□□ -0.82
HTT-205ENST00000509043 SLC47A2Q86VL8 602 aa9.91□□□□□ -0.82
HTT-205ENST00000509043 MREGQ8N565 214 aa9.91□□□□□ -0.82
HTT-205ENST00000509043 C2orf69Q8N8R5 385 aa9.91□□□□□ -0.82
HTT-205ENST00000509043 RNF149Q8NC42 400 aa9.91□□□□□ -0.82
HTT-205ENST00000509043 ZNF516Q92618 1163 aa9.91□□□□□ -0.82
HTT-205ENST00000509043 KAT5Q92993 513 aa9.91□□□□□ -0.82
HTT-205ENST00000509043 MS4A14Q96JA4 679 aa9.91□□□□□ -0.82
HTT-205ENST00000509043 MS4A4AQ96JQ5 239 aa9.91□□□□□ -0.82
HTT-205ENST00000509043 ARID3AQ99856 593 aa9.91□□□□□ -0.82
HTT-205ENST00000509043 TCHPQ9BT92 498 aa9.91□□□□□ -0.82
HTT-205ENST00000509043 PDE11AQ9HCR9 933 aa9.91□□□□□ -0.82
HTT-205ENST00000509043 OSGEPQ9NPF4 335 aa9.91□□□□□ -0.82
HTT-205ENST00000509043 TOPORSQ9NS56 1045 aaPredicted RBP9.91□□□□□ -0.82
HTT-205ENST00000509043 ANKFY1Q9P2R3 1169 aa9.91□□□□□ -0.82
HTT-205ENST00000509043 CPSF3Q9UKF6 684 aaKnown RBP9.91□□□□□ -0.82
HTT-205ENST00000509043 CLEC11AQ9Y240 323 aa9.91□□□□□ -0.82
HTT-205ENST00000509043 NOC2LQ9Y3T9 749 aaKnown RBP9.91□□□□□ -0.82
HTT-205ENST00000509043 ALG6Q9Y672 507 aa9.91□□□□□ -0.82
HTT-205ENST00000509043 SLC15A5A6NIM6 579 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 BTBD19C9JJ37 291 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 DDX3YO15523 660 aaKnown RBP9.9□□□□□ -0.82
HTT-205ENST00000509043 ZEB2O60315 1214 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 PEX10O60683 326 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 HEXIM1O94992 359 aaKnown RBP9.9□□□□□ -0.82
HTT-205ENST00000509043 C22orf31O95567 290 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 LSM8O95777 96 aaKnown RBP9.9□□□□□ -0.82
HTT-205ENST00000509043 ASS1P00966 412 aaKnown RBP9.9□□□□□ -0.82
HTT-205ENST00000509043 TNNC2P02585 160 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 MMEP08473 750 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 MCF2P10911 925 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 UNGP13051 313 aaPredicted RBP9.9□□□□□ -0.82
HTT-205ENST00000509043 HOXD8P13378 290 aaPredicted RBP9.9□□□□□ -0.82
HTT-205ENST00000509043 ACO1P21399 889 aaKnown RBP9.9□□□□□ -0.82
HTT-205ENST00000509043 CTNNA2P26232 953 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 OAS2P29728 719 aaKnown RBP9.9□□□□□ -0.82
HTT-205ENST00000509043 TNNT3P45378 269 aaPredicted RBP9.9□□□□□ -0.82
HTT-205ENST00000509043 NSFP46459 744 aaKnown RBP9.9□□□□□ -0.82
HTT-205ENST00000509043 NOP14P78316 857 aaKnown RBP9.9□□□□□ -0.82
HTT-205ENST00000509043 CENPCQ03188 943 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 MKRN4PQ13434 485 aaPredicted RBP9.9□□□□□ -0.82
HTT-205ENST00000509043 NCOA4Q13772 614 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 GRB14Q14449 540 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 LIN9Q5TKA1 542 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 ATF7IP2Q5U623 682 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 IQSEC1Q6DN90 963 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 EFCAB12Q6NXP0 572 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 TAPT1Q6NXT6 567 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 NT5DC4Q86YG4 428 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 ZNF564Q8TBZ8 553 aaPredicted RBP9.9□□□□□ -0.82
HTT-205ENST00000509043 MAIP1Q8WWC4 291 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 TATDN2Q93075 761 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 ZNF653Q96CK0 615 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 ARHGEF26Q96DR7 871 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 PCDHB18PQ96TA0 734 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 KRT12Q99456 494 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 ZSWIM1Q9BR11 485 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 FAM129AQ9BZQ8 928 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 ZNF518BQ9C0D4 1074 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 HAPLN2Q9GZV7 340 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 RAB17Q9H0T7 212 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 ABHD16BQ9H3Z7 469 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 EFCC1Q9HA90 598 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 SUGCTQ9HAC7 445 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 GBA2Q9HCG7 927 aaPredicted RBP9.9□□□□□ -0.82
HTT-205ENST00000509043 MRPL47Q9HD33 250 aaKnown RBP9.9□□□□□ -0.82
HTT-205ENST00000509043 PTPRHQ9HD43 1115 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 TAS2R14Q9NYV8 317 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 DMGDHQ9UI17 866 aaKnown RBP9.9□□□□□ -0.82
HTT-205ENST00000509043 PACSIN2Q9UNF0 486 aaPredicted RBP9.9□□□□□ -0.82
HTT-205ENST00000509043 SCINQ9Y6U3 715 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 ZNF236Q9UL36 1845 aa9.9□□□□□ -0.82
HTT-205ENST00000509043 MYH10P35580 1976 aa9.9□□□□□ -0.83
HTT-205ENST00000509043 FAM187AA6NFU0 413 aa9.89□□□□□ -0.83
HTT-205ENST00000509043 RRN3P2A6NIE6 340 aa9.89□□□□□ -0.83
HTT-205ENST00000509043 BHMG1C9JSJ3 638 aaPredicted RBP9.89□□□□□ -0.83
HTT-205ENST00000509043 ABLIM1O14639 778 aa9.89□□□□□ -0.83
HTT-205ENST00000509043 OPA1O60313 960 aa9.89□□□□□ -0.83
HTT-205ENST00000509043 VNN1O95497 513 aa9.89□□□□□ -0.83
HTT-205ENST00000509043 CYP1A1P04798 512 aaPredicted RBP9.89□□□□□ -0.83
HTT-205ENST00000509043 LGALS2P05162 132 aa9.89□□□□□ -0.83
HTT-205ENST00000509043 SRGAP2CP0DJJ0 459 aa9.89□□□□□ -0.83
HTT-205ENST00000509043 CYP2C8P10632 490 aa9.89□□□□□ -0.83
HTT-205ENST00000509043 MARK3P27448 753 aa9.89□□□□□ -0.83
HTT-205ENST00000509043 CTNNA1P35221 906 aaKnown RBP9.89□□□□□ -0.83
HTT-205ENST00000509043 C1QBPQ07021 282 aaKnown RBP9.89□□□□□ -0.83
HTT-205ENST00000509043 DHX34Q14147 1143 aaKnown RBP9.89□□□□□ -0.83
HTT-205ENST00000509043 TERF2Q15554 542 aa9.89□□□□□ -0.83
HTT-205ENST00000509043 DUSP28Q4G0W2 176 aa9.89□□□□□ -0.83
HTT-205ENST00000509043 SEL1L2Q5TEA6 688 aa9.89□□□□□ -0.83
HTT-205ENST00000509043 TAF3Q5VWG9 929 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms