RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 LILRA6Q6PI73 481 aa11.05□□□□□ -0.64
UBE2D3-227ENST00000508818 MPZL3Q6UWV2 235 aa11.05□□□□□ -0.64
UBE2D3-227ENST00000508818 KCNK18Q7Z418 384 aa11.05□□□□□ -0.64
UBE2D3-227ENST00000508818 DAW1Q8N136 415 aa11.05□□□□□ -0.64
UBE2D3-227ENST00000508818 SYT2Q8N9I0 419 aaPredicted RBP11.05□□□□□ -0.64
UBE2D3-227ENST00000508818 LNX1Q8TBB1 728 aaPredicted RBP11.05□□□□□ -0.64
UBE2D3-227ENST00000508818 FEZF2Q8TBJ5 459 aa11.05□□□□□ -0.64
UBE2D3-227ENST00000508818 SPIRE2Q8WWL2 714 aa11.05□□□□□ -0.64
UBE2D3-227ENST00000508818 BICD1Q96G01 975 aa11.05□□□□□ -0.64
UBE2D3-227ENST00000508818 PNMA5Q96PV4 448 aa11.05□□□□□ -0.64
UBE2D3-227ENST00000508818 PPP1R10Q96QC0 940 aaKnown RBP11.05□□□□□ -0.64
UBE2D3-227ENST00000508818 CLSTN3Q9BQT9 956 aa11.05□□□□□ -0.64
UBE2D3-227ENST00000508818 NTPCRQ9BSD7 190 aaKnown RBP11.05□□□□□ -0.64
UBE2D3-227ENST00000508818 CDT1Q9H211 546 aa11.05□□□□□ -0.64
UBE2D3-227ENST00000508818 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.05□□□□□ -0.646e-9■□□□□ 11.3
UBE2D3-227ENST00000508818 LARSQ9P2J5 1176 aaKnown RBP11.05□□□□□ -0.64
UBE2D3-227ENST00000508818 ARHGAP28Q9P2N2 729 aa11.05□□□□□ -0.64
UBE2D3-227ENST00000508818 POLIQ9UNA4 740 aa11.05□□□□□ -0.64
UBE2D3-227ENST00000508818 NUB1Q9Y5A7 615 aa11.05□□□□□ -0.64
UBE2D3-227ENST00000508818 VPS37CA5D8V6 355 aaPredicted RBP11.04□□□□□ -0.64
UBE2D3-227ENST00000508818 CLDN3O15551 220 aa11.04□□□□□ -0.64
UBE2D3-227ENST00000508818 SLC26A4O43511 780 aa11.04□□□□□ -0.64
UBE2D3-227ENST00000508818 TOM1L1O75674 476 aa11.04□□□□□ -0.64
UBE2D3-227ENST00000508818 CD2BP2O95400 341 aaKnown RBP11.04□□□□□ -0.64
UBE2D3-227ENST00000508818 PDGFBP01127 241 aaPredicted RBP11.04□□□□□ -0.64
UBE2D3-227ENST00000508818 HNRNPA1P09651 372 aaKnown RBP eCLIP11.04□□□□□ -0.64
UBE2D3-227ENST00000508818 PYGBP11216 843 aa11.04□□□□□ -0.64
UBE2D3-227ENST00000508818 PDCP20941 246 aa11.04□□□□□ -0.64
UBE2D3-227ENST00000508818 FSHRP23945 695 aa11.04□□□□□ -0.64
UBE2D3-227ENST00000508818 OR1D2P34982 312 aa11.04□□□□□ -0.64
UBE2D3-227ENST00000508818 VCPP55072 806 aaKnown RBP11.04□□□□□ -0.64
UBE2D3-227ENST00000508818 NAB2Q15742 525 aa11.04□□□□□ -0.64
UBE2D3-227ENST00000508818 HYIQ5T013 277 aa11.04□□□□□ -0.64
UBE2D3-227ENST00000508818 GET4Q7L5D6 327 aaPredicted RBP11.04□□□□□ -0.64
UBE2D3-227ENST00000508818 BRAPQ7Z569 592 aa11.04□□□□□ -0.64
UBE2D3-227ENST00000508818 CEP120Q8N960 986 aa11.04□□□□□ -0.64
UBE2D3-227ENST00000508818 PRSS33Q8NF86 280 aa11.04□□□□□ -0.64
UBE2D3-227ENST00000508818 FLCNQ8NFG4 579 aa11.04□□□□□ -0.64
UBE2D3-227ENST00000508818 ATOH1Q92858 354 aaPredicted RBP11.04□□□□□ -0.64
UBE2D3-227ENST00000508818 NXPE3Q969Y0 559 aa11.04□□□□□ -0.64
UBE2D3-227ENST00000508818 ZNF707Q96C28 371 aaPredicted RBP11.04□□□□□ -0.64
UBE2D3-227ENST00000508818 TBC1D32Q96NH3 1257 aa11.04□□□□□ -0.64
UBE2D3-227ENST00000508818 SMOC2Q9H3U7 446 aa11.04□□□□□ -0.64
UBE2D3-227ENST00000508818 PTPRHQ9HD43 1115 aa11.04□□□□□ -0.64
UBE2D3-227ENST00000508818 ANKFY1Q9P2R3 1169 aa11.04□□□□□ -0.64
UBE2D3-227ENST00000508818 ZNF318Q5VUA4 2279 aa11.04□□□□□ -0.64
UBE2D3-227ENST00000508818 TMEM189-UBE2V1I3L0A0 370 aa11.03□□□□□ -0.64
UBE2D3-227ENST00000508818 I3L4J1 428 aa11.03□□□□□ -0.64
UBE2D3-227ENST00000508818 PODXLO00592 558 aa11.03□□□□□ -0.64
UBE2D3-227ENST00000508818 FAM13AO94988 1023 aa11.03□□□□□ -0.64
UBE2D3-227ENST00000508818 C8AP07357 584 aa11.03□□□□□ -0.64
UBE2D3-227ENST00000508818 MAPTP10636 758 aaKnown RBP11.03□□□□□ -0.64
UBE2D3-227ENST00000508818 FGFR3P22607 806 aa11.03□□□□□ -0.64
UBE2D3-227ENST00000508818 MARCKSP29966 332 aaPredicted RBP11.03□□□□□ -0.64
UBE2D3-227ENST00000508818 ELF1P32519 619 aa11.03□□□□□ -0.64
UBE2D3-227ENST00000508818 RPL9P32969 192 aaKnown RBP11.03□□□□□ -0.64
UBE2D3-227ENST00000508818 MRE11P49959 708 aa11.03□□□□□ -0.64
UBE2D3-227ENST00000508818 SLC12A3P55017 1021 aa11.03□□□□□ -0.64
UBE2D3-227ENST00000508818 MAPK7Q13164 816 aa11.03□□□□□ -0.64
UBE2D3-227ENST00000508818 RAB33AQ14088 237 aa11.03□□□□□ -0.64
UBE2D3-227ENST00000508818 NOLC1Q14978 699 aaKnown RBP eCLIP11.03□□□□□ -0.64
UBE2D3-227ENST00000508818 UPP1Q16831 310 aa11.03□□□□□ -0.64
UBE2D3-227ENST00000508818 AXDND1Q5T1B0 1012 aaPredicted RBP11.03□□□□□ -0.64
UBE2D3-227ENST00000508818 ZPBP2Q6X784 338 aa11.03□□□□□ -0.64
UBE2D3-227ENST00000508818 ANKS3Q6ZW76 656 aa11.03□□□□□ -0.64
UBE2D3-227ENST00000508818 GRASPQ7Z6J2 395 aaPredicted RBP11.03□□□□□ -0.64
UBE2D3-227ENST00000508818 GPBP1Q86WP2 473 aa11.03□□□□□ -0.64
UBE2D3-227ENST00000508818 MYCT1Q8N699 235 aa11.03□□□□□ -0.64
UBE2D3-227ENST00000508818 TMEM161BQ8NDZ6 487 aa11.03□□□□□ -0.64
UBE2D3-227ENST00000508818 ZBTB45Q96K62 511 aaPredicted RBP11.03□□□□□ -0.64
UBE2D3-227ENST00000508818 MYADMQ96S97 322 aa11.03□□□□□ -0.64
UBE2D3-227ENST00000508818 ZHX3Q9H4I2 956 aa11.03□□□□□ -0.64
UBE2D3-227ENST00000508818 GOLGA2P5Q9HBQ8 144 aa11.03□□□□□ -0.64
UBE2D3-227ENST00000508818 EPS15L1Q9UBC2 864 aa11.03□□□□□ -0.64
UBE2D3-227ENST00000508818 FBXW11Q9UKB1 542 aa11.03□□□□□ -0.64
UBE2D3-227ENST00000508818 CDY1Q9Y6F8 540 aa11.03□□□□□ -0.64
UBE2D3-227ENST00000508818 ZFP37Q9Y6Q3 630 aaPredicted RBP11.03□□□□□ -0.64
UBE2D3-227ENST00000508818 NPHP3-ACAD11A0A0J9YXS1 232 aa11.02□□□□□ -0.65
UBE2D3-227ENST00000508818 H7C4K7 107 aa11.02□□□□□ -0.65
UBE2D3-227ENST00000508818 CCL16O15467 120 aa11.02□□□□□ -0.65
UBE2D3-227ENST00000508818 TBCAO75347 108 aaKnown RBP11.02□□□□□ -0.65
UBE2D3-227ENST00000508818 CHRM1P11229 460 aaPredicted RBP11.02□□□□□ -0.65
UBE2D3-227ENST00000508818 LAMP2P13473 410 aa11.02□□□□□ -0.65
UBE2D3-227ENST00000508818 KCNE1P15382 129 aa11.02□□□□□ -0.65
UBE2D3-227ENST00000508818 SCP2P22307 547 aa11.02□□□□□ -0.65
UBE2D3-227ENST00000508818 PROZP22891 400 aa11.02□□□□□ -0.65
UBE2D3-227ENST00000508818 TKTP29401 623 aaKnown RBP11.02□□□□□ -0.65
UBE2D3-227ENST00000508818 LONP1P36776 959 aaKnown RBP11.02□□□□□ -0.65
UBE2D3-227ENST00000508818 BRCC3P46736 316 aa11.02□□□□□ -0.65
UBE2D3-227ENST00000508818 LIG4P49917 911 aa11.02□□□□□ -0.65
UBE2D3-227ENST00000508818 CLCN5P51795 746 aa11.02□□□□□ -0.65
UBE2D3-227ENST00000508818 ARPP19P56211 112 aa11.02□□□□□ -0.65
UBE2D3-227ENST00000508818 SF3A1Q15459 793 aaKnown RBP11.02□□□□□ -0.65
UBE2D3-227ENST00000508818 UVSSAQ2YD98 709 aa11.02□□□□□ -0.65
UBE2D3-227ENST00000508818 TMEM119Q4V9L6 283 aa11.02□□□□□ -0.65
UBE2D3-227ENST00000508818 XKR4Q5GH76 650 aa11.02□□□□□ -0.65
UBE2D3-227ENST00000508818 ALKAL1Q6UXT8 129 aa11.02□□□□□ -0.65
UBE2D3-227ENST00000508818 TAS1R3Q7RTX0 852 aa11.02□□□□□ -0.65
UBE2D3-227ENST00000508818 HAUS6Q7Z4H7 955 aa11.02□□□□□ -0.65
UBE2D3-227ENST00000508818 SIX5Q8N196 739 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms