RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 SMC1BQ8NDV3 1235 aa5.47□□□□□ -1.53
PDLIM5-211ENST00000508531 NINJ1Q92982 152 aa5.47□□□□□ -1.53
PDLIM5-211ENST00000508531 ZNF622Q969S3 477 aaKnown RBP eCLIP5.47□□□□□ -1.53
PDLIM5-211ENST00000508531 FEZ1Q99689 392 aa5.47□□□□□ -1.53
PDLIM5-211ENST00000508531 NDC1Q9BTX1 674 aa5.47□□□□□ -1.53
PDLIM5-211ENST00000508531 SPTLC3Q9NUV7 552 aa5.47□□□□□ -1.53
PDLIM5-211ENST00000508531 PPP2R3BQ9Y5P8 575 aa5.47□□□□□ -1.53
PDLIM5-211ENST00000508531 KDM5DQ9BY66 1539 aa5.47□□□□□ -1.53
PDLIM5-211ENST00000508531 ZNF644Q9H582 1327 aaPredicted RBP5.47□□□□□ -1.53
PDLIM5-211ENST00000508531 SCAF11Q99590 1463 aaKnown RBP5.46□□□□□ -1.53
PDLIM5-211ENST00000508531 ANKRD30AQ9BXX3 1397 aa5.46□□□□□ -1.54
PDLIM5-211ENST00000508531 COL16A1Q07092 1604 aaPredicted RBP5.46□□□□□ -1.54
PDLIM5-211ENST00000508531 UQCRHLA0A096LP55 91 aa5.46□□□□□ -1.54
PDLIM5-211ENST00000508531 CENPVL1A0A0U1RR11 272 aa5.46□□□□□ -1.54
PDLIM5-211ENST00000508531 NRP2O60462 931 aa5.46□□□□□ -1.54
PDLIM5-211ENST00000508531 LPXNO60711 386 aa5.46□□□□□ -1.54
PDLIM5-211ENST00000508531 PPFIA4O75335 1185 aa5.46□□□□□ -1.54
PDLIM5-211ENST00000508531 UQCRHP07919 91 aa5.46□□□□□ -1.54
PDLIM5-211ENST00000508531 HSPA5P11021 654 aaKnown RBP5.46□□□□□ -1.54
PDLIM5-211ENST00000508531 LAG3P18627 525 aa5.46□□□□□ -1.54
PDLIM5-211ENST00000508531 ADRA1BP35368 520 aa5.46□□□□□ -1.54
PDLIM5-211ENST00000508531 PPARAQ07869 468 aa5.46□□□□□ -1.54
PDLIM5-211ENST00000508531 SART3Q15020 963 aaKnown RBP5.46□□□□□ -1.54
PDLIM5-211ENST00000508531 SEPT7Q16181 437 aaKnown RBP5.46□□□□□ -1.54
PDLIM5-211ENST00000508531 METTL24Q5JXM2 366 aa5.46□□□□□ -1.54
PDLIM5-211ENST00000508531 LMBR1LQ6UX01 489 aa5.46□□□□□ -1.54
PDLIM5-211ENST00000508531 DOK3Q7L591 496 aa5.46□□□□□ -1.54
PDLIM5-211ENST00000508531 DHX37Q8IY37 1157 aaKnown RBP5.46□□□□□ -1.54
PDLIM5-211ENST00000508531 ZNF610Q8N9Z0 462 aa5.46□□□□□ -1.54
PDLIM5-211ENST00000508531 SIN3AQ96ST3 1273 aa5.46□□□□□ -1.54
PDLIM5-211ENST00000508531 CHMP4BQ9H444 224 aaKnown RBP5.46□□□□□ -1.54
PDLIM5-211ENST00000508531 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.46□□□□□ -1.54
PDLIM5-211ENST00000508531 TRPM5Q9NZQ8 1165 aa5.46□□□□□ -1.54
PDLIM5-211ENST00000508531 CFDP1Q9UEE9 299 aaPredicted RBP5.46□□□□□ -1.54
PDLIM5-211ENST00000508531 PACSIN3Q9UKS6 424 aa5.46□□□□□ -1.54
PDLIM5-211ENST00000508531 KIF3AQ9Y496 699 aa5.46□□□□□ -1.54
PDLIM5-211ENST00000508531 ATP7AQ04656 1500 aa5.46□□□□□ -1.54
PDLIM5-211ENST00000508531 SYCP2Q9BX26 1530 aa5.46□□□□□ -1.54
PDLIM5-211ENST00000508531 FGD6Q6ZV73 1430 aa5.46□□□□□ -1.54
PDLIM5-211ENST00000508531 COL4A3Q01955 1670 aa5.46□□□□□ -1.54
PDLIM5-211ENST00000508531 CFAP65Q6ZU64 1925 aaKnown RBP5.46□□□□□ -1.54
PDLIM5-211ENST00000508531 DHX29Q7Z478 1369 aaKnown RBP5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 KIF15Q9NS87 1388 aa5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 ZC3H13Q5T200 1668 aaKnown RBP5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 A0A1W2PR48 441 aa5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 RHOBTB3O94955 611 aa5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 NUDT3O95989 172 aa5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 LMNAP02545 664 aaKnown RBP5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 HMGB1P09429 215 aaKnown RBP5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 CLEC2LP0C7M8 214 aa5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 ZSCAN20P17040 1043 aaPredicted RBP5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 ATF3P18847 181 aa5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 LSP1P33241 339 aa5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 GPR15P49685 360 aa5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 SCNN1BP51168 640 aa5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 NRG3P56975 720 aa5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 IL2P60568 153 aa5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 PHC1P78364 1004 aa5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 HECTD2Q5U5R9 776 aa5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 BRINP3Q76B58 766 aa5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 NIM1KQ8IY84 436 aa5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 LILRA3Q8N6C8 439 aaPredicted RBP5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 EXOC6Q8TAG9 804 aa5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 APPBP2Q92624 585 aa5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 TARS2Q9BW92 718 aaKnown RBP5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 SLC46A2Q9BY10 475 aa5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 ANO3Q9BYT9 981 aa5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 SPON1Q9HCB6 807 aa5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 FANCLQ9NW38 375 aa5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 CALCOCO1Q9P1Z2 691 aa5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 ANKFY1Q9P2R3 1169 aa5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 TRPC5Q9UL62 973 aaPredicted RBP5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 NOL7Q9UMY1 257 aaKnown RBP5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 EP400Q96L91 3159 aa5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 MYOM3Q5VTT5 1437 aa5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 KIAA1107Q9UPP5 1409 aa5.45□□□□□ -1.54
PDLIM5-211ENST00000508531 PRR5-ARHGAP8B1AHC4 643 aa5.44□□□□□ -1.54
PDLIM5-211ENST00000508531 LEFTY2O00292 366 aa5.44□□□□□ -1.54
PDLIM5-211ENST00000508531 B3GALT2O43825 422 aa5.44□□□□□ -1.54
PDLIM5-211ENST00000508531 PLXNC1O60486 1568 aa5.44□□□□□ -1.54
PDLIM5-211ENST00000508531 MANFP55145 182 aaKnown RBP5.44□□□□□ -1.54
PDLIM5-211ENST00000508531 RIPK4P57078 832 aa5.44□□□□□ -1.54
PDLIM5-211ENST00000508531 CHAF1AQ13111 956 aaPredicted RBP5.44□□□□□ -1.54
PDLIM5-211ENST00000508531 UBE3CQ15386 1083 aa5.44□□□□□ -1.54
PDLIM5-211ENST00000508531 TERF2Q15554 542 aa5.44□□□□□ -1.54
PDLIM5-211ENST00000508531 CCDC178Q5BJE1 867 aa5.44□□□□□ -1.54
PDLIM5-211ENST00000508531 IQSEC1Q6DN90 963 aa5.44□□□□□ -1.54
PDLIM5-211ENST00000508531 C16orf86Q6ZW13 317 aa5.44□□□□□ -1.54
PDLIM5-211ENST00000508531 GDF7Q7Z4P5 450 aa5.44□□□□□ -1.54
PDLIM5-211ENST00000508531 GLB1L2Q8IW92 636 aa5.44□□□□□ -1.54
PDLIM5-211ENST00000508531 NGEFQ8N5V2 710 aa5.44□□□□□ -1.54
PDLIM5-211ENST00000508531 BEND2Q8NDZ0 799 aa5.44□□□□□ -1.54
PDLIM5-211ENST00000508531 PNISRQ8TF01 805 aaKnown RBP5.44□□□□□ -1.54
PDLIM5-211ENST00000508531 DRC1Q96MC2 740 aa5.44□□□□□ -1.54
PDLIM5-211ENST00000508531 SLKQ9H2G2 1235 aaPredicted RBP5.44□□□□□ -1.54
PDLIM5-211ENST00000508531 PRDM12Q9H4Q4 367 aa5.44□□□□□ -1.54
PDLIM5-211ENST00000508531 TMEM51Q9NW97 253 aa5.44□□□□□ -1.54
PDLIM5-211ENST00000508531 ZNHIT2Q9UHR6 403 aa5.44□□□□□ -1.54
PDLIM5-211ENST00000508531 EVLQ9UI08 416 aaPredicted RBP5.44□□□□□ -1.54
PDLIM5-211ENST00000508531 PRSS50Q9UI38 385 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms