RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 SAAL1Q96ER3 474 aa14.31□□□□□ -0.12
SNCAIP-209ENST00000508017 WDR11Q9BZH6 1224 aa14.31□□□□□ -0.12
SNCAIP-209ENST00000508017 MYLK2Q9H1R3 596 aa14.31□□□□□ -0.12
SNCAIP-209ENST00000508017 TMEM206Q9H813 350 aa14.31□□□□□ -0.12
SNCAIP-209ENST00000508017 NKIRAS1Q9NYS0 192 aa14.31□□□□□ -0.12
SNCAIP-209ENST00000508017 NKX1-2Q9UD57 310 aaPredicted RBP14.31□□□□□ -0.12
SNCAIP-209ENST00000508017 SLX4Q8IY92 1834 aa14.31□□□□□ -0.12
SNCAIP-209ENST00000508017 EIF4E1BA6NMX2 242 aaKnown RBP14.31□□□□□ -0.12
SNCAIP-209ENST00000508017 G3V3G9 751 aa14.31□□□□□ -0.12
SNCAIP-209ENST00000508017 IPO5O00410 1097 aaKnown RBP14.31□□□□□ -0.12
SNCAIP-209ENST00000508017 SPAG7O75391 227 aa14.31□□□□□ -0.12
SNCAIP-209ENST00000508017 TCEA3O75764 348 aa14.31□□□□□ -0.12
SNCAIP-209ENST00000508017 UNC5CO95185 931 aa14.31□□□□□ -0.12
SNCAIP-209ENST00000508017 RNASELQ05823 741 aaKnown RBP14.31□□□□□ -0.12
SNCAIP-209ENST00000508017 DCAF8Q5TAQ9 597 aa14.31□□□□□ -0.12
SNCAIP-209ENST00000508017 ARHGEF18Q6ZSZ5 1173 aa14.31□□□□□ -0.12
SNCAIP-209ENST00000508017 CNKSR1Q969H4 720 aa14.31□□□□□ -0.12
SNCAIP-209ENST00000508017 C8orf37Q96NL8 207 aa14.31□□□□□ -0.12
SNCAIP-209ENST00000508017 TMEM237Q96Q45 408 aa14.31□□□□□ -0.12
SNCAIP-209ENST00000508017 PLCD4Q9BRC7 762 aa14.31□□□□□ -0.12
SNCAIP-209ENST00000508017 TRAIPQ9BWF2 469 aa14.31□□□□□ -0.12
SNCAIP-209ENST00000508017 PITPNM3Q9BZ71 974 aa14.31□□□□□ -0.12
SNCAIP-209ENST00000508017 GPRC5CQ9NQ84 441 aa14.31□□□□□ -0.12
SNCAIP-209ENST00000508017 BATF3Q9NR55 127 aa14.31□□□□□ -0.12
SNCAIP-209ENST00000508017 LARSQ9P2J5 1176 aaKnown RBP14.31□□□□□ -0.12
SNCAIP-209ENST00000508017 MROH7Q68CQ1 1323 aa14.3□□□□□ -0.12
SNCAIP-209ENST00000508017 SLC16A4O15374 487 aa14.3□□□□□ -0.12
SNCAIP-209ENST00000508017 SORBS3O60504 671 aa14.3□□□□□ -0.12
SNCAIP-209ENST00000508017 ATP2A2P16615 1042 aaKnown RBP14.3□□□□□ -0.12
SNCAIP-209ENST00000508017 MUTP22033 750 aa14.3□□□□□ -0.12
SNCAIP-209ENST00000508017 STAT2P52630 851 aa14.3□□□□□ -0.12
SNCAIP-209ENST00000508017 ATP11AP98196 1134 aa14.3□□□□□ -0.12
SNCAIP-209ENST00000508017 STRN3Q13033 797 aa14.3□□□□□ -0.12
SNCAIP-209ENST00000508017 MKRN3Q13064 507 aaKnown RBP14.3□□□□□ -0.12
SNCAIP-209ENST00000508017 CYP4F22Q6NT55 531 aa14.3□□□□□ -0.12
SNCAIP-209ENST00000508017 C12orf56Q8IXR9 622 aa14.3□□□□□ -0.12
SNCAIP-209ENST00000508017 EURLQ9NYK6 297 aa14.3□□□□□ -0.12
SNCAIP-209ENST00000508017 ZBTB21Q9ULJ3 1066 aa14.3□□□□□ -0.12
SNCAIP-209ENST00000508017 UBR3Q6ZT12 1888 aa14.3□□□□□ -0.12
SNCAIP-209ENST00000508017 RASA4BC9J798 803 aa14.3□□□□□ -0.12
SNCAIP-209ENST00000508017 RASA4O43374 803 aa14.3□□□□□ -0.12
SNCAIP-209ENST00000508017 CDH16O75309 829 aa14.3□□□□□ -0.12
SNCAIP-209ENST00000508017 GAS8O95995 478 aa14.3□□□□□ -0.12
SNCAIP-209ENST00000508017 VIL1P09327 827 aaKnown RBP14.3□□□□□ -0.12
SNCAIP-209ENST00000508017 RALAP11233 206 aa14.3□□□□□ -0.12
SNCAIP-209ENST00000508017 DNAJC3Q13217 504 aa14.3□□□□□ -0.12
SNCAIP-209ENST00000508017 HAUS6Q7Z4H7 955 aa14.3□□□□□ -0.12
SNCAIP-209ENST00000508017 TAS1R2Q8TE23 839 aa14.3□□□□□ -0.12
SNCAIP-209ENST00000508017 SPDL1Q96EA4 605 aa14.3□□□□□ -0.12
SNCAIP-209ENST00000508017 FAM167BQ9BTA0 163 aa14.3□□□□□ -0.12
SNCAIP-209ENST00000508017 NEU2Q9Y3R4 380 aa14.3□□□□□ -0.12
SNCAIP-209ENST00000508017 PLS3P13797 630 aa14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 TARSP26639 723 aaKnown RBP14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 ABL2P42684 1182 aa14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 CCNHP51946 323 aaPredicted RBP14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 CLEC16AQ2KHT3 1053 aa14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 GRIPAP1Q4V328 841 aa14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 IZUMO3Q5VZ72 239 aa14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 ACER1Q8TDN7 264 aa14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 ERP27Q96DN0 273 aa14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 DDX27Q96GQ7 796 aaKnown RBP14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 PLVAPQ9BX97 442 aa14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 IDI2Q9BXS1 227 aa14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 KIF9Q9HAQ2 790 aa14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 SLCO1B3Q9NPD5 702 aa14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 CHKBQ9Y259 395 aa14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 ATRNL1Q5VV63 1379 aa14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 POLRMTO00411 1230 aaKnown RBP14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 SMNDC1O75940 238 aaKnown RBP eCLIP14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 KRT5P13647 590 aa14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 ADSSP30520 456 aa14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 RARRES1P49788 294 aa14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 PEX3P56589 373 aa14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 ACVR2BQ13705 512 aa14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 VPS72Q15906 364 aa14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 SNRNP35Q16560 246 aaKnown RBP14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 NAIF1Q69YI7 327 aaPredicted RBP14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 SYDE1Q6ZW31 735 aaPredicted RBP14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 MIER3Q7Z3K6 550 aa14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 ANKS1BQ7Z6G8 1248 aa14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 ATL2Q8NHH9 583 aa14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 CPA5Q8WXQ8 436 aa14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 MAML1Q92585 1016 aa14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 PI4K2AQ9BTU6 479 aa14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 HAO1Q9UJM8 370 aa14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 GRID1Q9ULK0 1009 aa14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 USP20Q9Y2K6 914 aa14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 ZHX2Q9Y6X8 837 aa14.29□□□□□ -0.12
SNCAIP-209ENST00000508017 FAM47DPA6NHR8 397 aa14.28□□□□□ -0.12
SNCAIP-209ENST00000508017 ITGB5P18084 799 aa14.28□□□□□ -0.12
SNCAIP-209ENST00000508017 GCAP28676 217 aa14.28□□□□□ -0.12
SNCAIP-209ENST00000508017 SKIV2L2P42285 1042 aaKnown RBP14.28□□□□□ -0.12
SNCAIP-209ENST00000508017 CAV1Q03135 178 aa14.28□□□□□ -0.12
SNCAIP-209ENST00000508017 CCDC15Q0P6D6 951 aa14.28□□□□□ -0.12
SNCAIP-209ENST00000508017 HP1BP3Q5SSJ5 553 aaPredicted RBP14.28□□□□□ -0.12
SNCAIP-209ENST00000508017 PPP1R21Q6ZMI0 780 aa14.28□□□□□ -0.12
SNCAIP-209ENST00000508017 MICAL1Q8TDZ2 1067 aa14.28□□□□□ -0.12
SNCAIP-209ENST00000508017 FBF1Q8TES7 1133 aa14.28□□□□□ -0.12
SNCAIP-209ENST00000508017 GRK7Q8WTQ7 553 aa14.28□□□□□ -0.12
SNCAIP-209ENST00000508017 NGLY1Q96IV0 654 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms