RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 CUL2Q13617 745 aa18.95■□□□□ 0.62
SFXN1-208ENST00000507823 LAMC2Q13753 1193 aa18.95■□□□□ 0.62
SFXN1-208ENST00000507823 MAPK6Q16659 721 aa18.95■□□□□ 0.62
SFXN1-208ENST00000507823 FAM71BQ8TC56 605 aa18.95■□□□□ 0.62
SFXN1-208ENST00000507823 AVENQ9NQS1 362 aaPredicted RBP18.95■□□□□ 0.62
SFXN1-208ENST00000507823 CYP1A1P04798 512 aaPredicted RBP18.94■□□□□ 0.62
SFXN1-208ENST00000507823 CLTAP09496 248 aa18.94■□□□□ 0.62
SFXN1-208ENST00000507823 TBXAS1P24557 533 aaPredicted RBP18.94■□□□□ 0.62
SFXN1-208ENST00000507823 GTF2A2P52657 109 aa18.94■□□□□ 0.62
SFXN1-208ENST00000507823 POU5F1Q01860 360 aaKnown RBP18.94■□□□□ 0.62
SFXN1-208ENST00000507823 SURF1Q15526 300 aa18.94■□□□□ 0.62
SFXN1-208ENST00000507823 TMEM63BQ5T3F8 832 aa18.94■□□□□ 0.62
SFXN1-208ENST00000507823 LINC01465Q8N7H1 131 aa18.94■□□□□ 0.62
SFXN1-208ENST00000507823 RNF149Q8NC42 400 aa18.94■□□□□ 0.62
SFXN1-208ENST00000507823 OR5B17Q8NGF7 314 aa18.94■□□□□ 0.62
SFXN1-208ENST00000507823 CPSF3Q9UKF6 684 aaKnown RBP18.94■□□□□ 0.62
SFXN1-208ENST00000507823 PDHXO00330 501 aa18.94■□□□□ 0.62
SFXN1-208ENST00000507823 ACKR2O00590 384 aa18.94■□□□□ 0.62
SFXN1-208ENST00000507823 STRNO43815 780 aa18.94■□□□□ 0.62
SFXN1-208ENST00000507823 MRPS25P82663 173 aaKnown RBP18.94■□□□□ 0.62
SFXN1-208ENST00000507823 TFDP1Q14186 410 aa18.94■□□□□ 0.62
SFXN1-208ENST00000507823 ZNF484Q5JVG2 852 aa18.94■□□□□ 0.62
SFXN1-208ENST00000507823 PRDM10Q9NQV6 1147 aa18.94■□□□□ 0.62
SFXN1-208ENST00000507823 ERAP1Q9NZ08 941 aa18.94■□□□□ 0.62
SFXN1-208ENST00000507823 BTBD19C9JJ37 291 aa18.93■□□□□ 0.62
SFXN1-208ENST00000507823 CTNNA2P26232 953 aa18.93■□□□□ 0.62
SFXN1-208ENST00000507823 TNNT3P45378 269 aaPredicted RBP18.93■□□□□ 0.62
SFXN1-208ENST00000507823 PEX5P50542 639 aa18.93■□□□□ 0.62
SFXN1-208ENST00000507823 RNASE9P60153 205 aaKnown RBP18.93■□□□□ 0.62
SFXN1-208ENST00000507823 PTENP60484 403 aa18.93■□□□□ 0.62
SFXN1-208ENST00000507823 PAK2Q13177 524 aa18.93■□□□□ 0.62
SFXN1-208ENST00000507823 BIRC3Q13489 604 aa18.93■□□□□ 0.62
SFXN1-208ENST00000507823 PPP2R5EQ16537 467 aa18.93■□□□□ 0.62
SFXN1-208ENST00000507823 PTPROQ16827 1216 aa18.93■□□□□ 0.62
SFXN1-208ENST00000507823 IFNLR1Q8IU57 520 aaPredicted RBP18.93■□□□□ 0.62
SFXN1-208ENST00000507823 LRRC71Q8N4P6 559 aa18.93■□□□□ 0.62
SFXN1-208ENST00000507823 MREGQ8N565 214 aa18.93■□□□□ 0.62
SFXN1-208ENST00000507823 SEC14L1Q92503 715 aa18.93■□□□□ 0.62
SFXN1-208ENST00000507823 ALG3Q92685 438 aa18.93■□□□□ 0.62
SFXN1-208ENST00000507823 NAP1L3Q99457 506 aaPredicted RBP18.93■□□□□ 0.62
SFXN1-208ENST00000507823 TRPC6Q9Y210 931 aa18.93■□□□□ 0.62
SFXN1-208ENST00000507823 KRIT1O00522 736 aa18.93■□□□□ 0.62
SFXN1-208ENST00000507823 C22orf31O95567 290 aa18.93■□□□□ 0.62
SFXN1-208ENST00000507823 KRT5P13647 590 aa18.93■□□□□ 0.62
SFXN1-208ENST00000507823 CASKIN2Q8WXE0 1202 aa18.93■□□□□ 0.62
SFXN1-208ENST00000507823 ELMO3Q96BJ8 720 aa18.93■□□□□ 0.62
SFXN1-208ENST00000507823 ZSWIM1Q9BR11 485 aa18.93■□□□□ 0.62
SFXN1-208ENST00000507823 WNT8AQ9H1J5 351 aa18.93■□□□□ 0.62
SFXN1-208ENST00000507823 EPB41L5Q9HCM4 733 aa18.93■□□□□ 0.62
SFXN1-208ENST00000507823 ANK1P16157 1881 aa18.93■□□□□ 0.62
SFXN1-208ENST00000507823 SART1O43290 800 aaKnown RBP18.92■□□□□ 0.62
SFXN1-208ENST00000507823 SYF2O95926 243 aaKnown RBP18.92■□□□□ 0.62
SFXN1-208ENST00000507823 MYBL1P10243 752 aa18.92■□□□□ 0.62
SFXN1-208ENST00000507823 ADORA2AP29274 412 aa18.92■□□□□ 0.62
SFXN1-208ENST00000507823 CARSP49589 748 aaKnown RBP18.92■□□□□ 0.62
SFXN1-208ENST00000507823 ZNF132P52740 706 aa18.92■□□□□ 0.62
SFXN1-208ENST00000507823 GUCY2DQ02846 1103 aa18.92■□□□□ 0.62
SFXN1-208ENST00000507823 CENPCQ03188 943 aa18.92■□□□□ 0.62
SFXN1-208ENST00000507823 FAM187BQ17R55 369 aa18.92■□□□□ 0.62
SFXN1-208ENST00000507823 WDR78Q5VTH9 848 aa18.92■□□□□ 0.62
SFXN1-208ENST00000507823 TRIM72Q6ZMU5 477 aa18.92■□□□□ 0.62
SFXN1-208ENST00000507823 ZNF564Q8TBZ8 553 aaPredicted RBP18.92■□□□□ 0.62
SFXN1-208ENST00000507823 BRI3BPQ8WY22 251 aa18.92■□□□□ 0.62
SFXN1-208ENST00000507823 ZNF653Q96CK0 615 aa18.92■□□□□ 0.62
SFXN1-208ENST00000507823 RNPC3Q96LT9 517 aaKnown RBP18.92■□□□□ 0.62
SFXN1-208ENST00000507823 NUP85Q9BW27 656 aa18.92■□□□□ 0.62
SFXN1-208ENST00000507823 ZCCHC17Q9NP64 241 aaKnown RBP18.92■□□□□ 0.62
SFXN1-208ENST00000507823 COL1A2P08123 1366 aa18.92■□□□□ 0.62
SFXN1-208ENST00000507823 ASS1P00966 412 aaKnown RBP18.92■□□□□ 0.62
SFXN1-208ENST00000507823 GH1P01241 217 aa18.92■□□□□ 0.62
SFXN1-208ENST00000507823 TNFSF9P41273 254 aa18.92■□□□□ 0.62
SFXN1-208ENST00000507823 NOP14P78316 857 aaKnown RBP18.92■□□□□ 0.62
SFXN1-208ENST00000507823 NCOA4Q13772 614 aa18.92■□□□□ 0.62
SFXN1-208ENST00000507823 SPOPLQ6IQ16 392 aa18.92■□□□□ 0.62
SFXN1-208ENST00000507823 MPZL3Q6UWV2 235 aa18.92■□□□□ 0.62
SFXN1-208ENST00000507823 SND1Q7KZF4 910 aaKnown RBP eCLIP18.92■□□□□ 0.62
SFXN1-208ENST00000507823 PPTC7Q8NI37 304 aa18.92■□□□□ 0.62
SFXN1-208ENST00000507823 TRIM11Q96F44 468 aa18.92■□□□□ 0.62
SFXN1-208ENST00000507823 NUB1Q9Y5A7 615 aa18.92■□□□□ 0.62
SFXN1-208ENST00000507823 ZNF236Q9UL36 1845 aa18.92■□□□□ 0.62
SFXN1-208ENST00000507823 A0A0U1RQG5 324 aaPredicted RBP18.91■□□□□ 0.62
SFXN1-208ENST00000507823 AGPSO00116 658 aa18.91■□□□□ 0.62
SFXN1-208ENST00000507823 SRGAP2CP0DJJ0 459 aa18.91■□□□□ 0.62
SFXN1-208ENST00000507823 KLHL7Q8IXQ5 586 aa18.91■□□□□ 0.62
SFXN1-208ENST00000507823 MCOLN2Q8IZK6 566 aa18.91■□□□□ 0.62
SFXN1-208ENST00000507823 UBL4BQ8N7F7 174 aa18.91■□□□□ 0.62
SFXN1-208ENST00000507823 AP1M1Q9BXS5 423 aa18.91■□□□□ 0.62
SFXN1-208ENST00000507823 POLR3GO15318 223 aaPredicted RBP18.91■□□□□ 0.62
SFXN1-208ENST00000507823 FGGP02679 453 aa18.91■□□□□ 0.62
SFXN1-208ENST00000507823 LGALS2P05162 132 aa18.91■□□□□ 0.62
SFXN1-208ENST00000507823 HOXD8P13378 290 aaPredicted RBP18.91■□□□□ 0.62
SFXN1-208ENST00000507823 ITGA4P13612 1032 aa18.91■□□□□ 0.62
SFXN1-208ENST00000507823 HSPA6P17066 643 aa18.91■□□□□ 0.62
SFXN1-208ENST00000507823 COMTP21964 271 aa18.91■□□□□ 0.62
SFXN1-208ENST00000507823 CTNNA1P35221 906 aaKnown RBP18.91■□□□□ 0.62
SFXN1-208ENST00000507823 MBTD1Q05BQ5 628 aa18.91■□□□□ 0.62
SFXN1-208ENST00000507823 CUL1Q13616 776 aa18.91■□□□□ 0.62
SFXN1-208ENST00000507823 RNPEPQ9H4A4 650 aa18.91■□□□□ 0.62
SFXN1-208ENST00000507823 TNFSF13BQ9Y275 285 aa18.91■□□□□ 0.62
SFXN1-208ENST00000507823 CCL15-CCL14A0A0B4J2E2 113 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms