RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 SP7Q8TDD2 431 aaPredicted RBP21.76■■□□□ 1.07
USP53-203ENST00000507597 ZFP42Q96MM3 310 aa21.76■■□□□ 1.07
USP53-203ENST00000507597 DUSP9Q99956 384 aaKnown RBP21.76■■□□□ 1.07
USP53-203ENST00000507597 THAP9Q9H5L6 903 aa21.76■■□□□ 1.07
USP53-203ENST00000507597 SLC28A3Q9HAS3 691 aa21.76■■□□□ 1.07
USP53-203ENST00000507597 RC3H2Q9HBD1 1191 aaKnown RBP21.76■■□□□ 1.07
USP53-203ENST00000507597 TBC1D13Q9NVG8 400 aa21.76■■□□□ 1.07
USP53-203ENST00000507597 STK39Q9UEW8 545 aa21.76■■□□□ 1.07
USP53-203ENST00000507597 PCDHB12Q9Y5F1 795 aa21.76■■□□□ 1.07
USP53-203ENST00000507597 CEP290O15078 2479 aa21.75■■□□□ 1.07
USP53-203ENST00000507597 AKAP3O75969 853 aa21.75■■□□□ 1.07
USP53-203ENST00000507597 TPM2P07951 284 aa21.75■■□□□ 1.07
USP53-203ENST00000507597 RPL9P32969 192 aaKnown RBP21.75■■□□□ 1.07
USP53-203ENST00000507597 ZNF165P49910 485 aa21.75■■□□□ 1.07
USP53-203ENST00000507597 VAMP7P51809 220 aa21.75■■□□□ 1.07
USP53-203ENST00000507597 LRSAM1Q6UWE0 723 aa21.75■■□□□ 1.07
USP53-203ENST00000507597 TMCO2Q7Z6W1 182 aaPredicted RBP21.75■■□□□ 1.07
USP53-203ENST00000507597 GZF1Q9H116 711 aaPredicted RBP21.75■■□□□ 1.07
USP53-203ENST00000507597 IKBKBO14920 756 aa21.74■■□□□ 1.07
USP53-203ENST00000507597 DLATP10515 647 aaKnown RBP21.74■■□□□ 1.07
USP53-203ENST00000507597 PPM1AP35813 382 aa21.74■■□□□ 1.07
USP53-203ENST00000507597 CASP4P49662 377 aa21.74■■□□□ 1.07
USP53-203ENST00000507597 RABGGTBP53611 331 aa21.74■■□□□ 1.07
USP53-203ENST00000507597 BFSP1Q12934 665 aa21.74■■□□□ 1.07
USP53-203ENST00000507597 PARD3BQ8TEW8 1205 aa21.74■■□□□ 1.07
USP53-203ENST00000507597 CCDC127Q96BQ5 260 aa21.74■■□□□ 1.07
USP53-203ENST00000507597 ZNF558Q96NG5 402 aa21.74■■□□□ 1.07
USP53-203ENST00000507597 PPP1R10Q96QC0 940 aaKnown RBP21.74■■□□□ 1.07
USP53-203ENST00000507597 CGRRF1Q99675 332 aa21.74■■□□□ 1.07
USP53-203ENST00000507597 FUCA2Q9BTY2 467 aa21.74■■□□□ 1.07
USP53-203ENST00000507597 COLEC11Q9BWP8 271 aa21.74■■□□□ 1.07
USP53-203ENST00000507597 TSPY26PQ9H489 355 aa21.74■■□□□ 1.07
USP53-203ENST00000507597 PDE11AQ9HCR9 933 aa21.74■■□□□ 1.07
USP53-203ENST00000507597 FAN1Q9Y2M0 1017 aa21.74■■□□□ 1.07
USP53-203ENST00000507597 GRXCR1A8MXD5 290 aa21.73■■□□□ 1.07
USP53-203ENST00000507597 PTGESO14684 152 aa21.73■■□□□ 1.07
USP53-203ENST00000507597 ZC3H11AO75152 810 aaKnown RBP eCLIP21.73■■□□□ 1.07
USP53-203ENST00000507597 TFAMQ00059 246 aaKnown RBP21.73■■□□□ 1.07
USP53-203ENST00000507597 SPAG1Q07617 926 aa21.73■■□□□ 1.07
USP53-203ENST00000507597 JADE1Q6IE81 842 aa21.73■■□□□ 1.07
USP53-203ENST00000507597 LRRC55Q6ZSA7 311 aa21.73■■□□□ 1.07
USP53-203ENST00000507597 CREBRFQ8IUR6 639 aa21.73■■□□□ 1.07
USP53-203ENST00000507597 GSTCDQ8NEC7 633 aa21.73■■□□□ 1.07
USP53-203ENST00000507597 PLVAPQ9BX97 442 aa21.73■■□□□ 1.07
USP53-203ENST00000507597 PBX4Q9BYU1 374 aa21.73■■□□□ 1.07
USP53-203ENST00000507597 MIOSQ9NXC5 875 aa21.73■■□□□ 1.07
USP53-203ENST00000507597 NFE2L3Q9Y4A8 694 aa21.73■■□□□ 1.07
USP53-203ENST00000507597 RB1P06400 928 aa21.72■■□□□ 1.07
USP53-203ENST00000507597 GTF2H1P32780 548 aa21.72■■□□□ 1.07
USP53-203ENST00000507597 OR1G1P47890 313 aa21.72■■□□□ 1.07
USP53-203ENST00000507597 GATMP50440 423 aa21.72■■□□□ 1.07
USP53-203ENST00000507597 CETN1Q12798 172 aa21.72■■□□□ 1.07
USP53-203ENST00000507597 GLRA4Q5JXX5 417 aa21.72■■□□□ 1.07
USP53-203ENST00000507597 TCERG1LQ5VWI1 586 aa21.72■■□□□ 1.07
USP53-203ENST00000507597 C11orf57Q6ZUT1 292 aaPredicted RBP21.72■■□□□ 1.07
USP53-203ENST00000507597 ZSWIM2Q8NEG5 633 aa21.72■■□□□ 1.07
USP53-203ENST00000507597 CLP1Q92989 425 aaKnown RBP21.72■■□□□ 1.07
USP53-203ENST00000507597 TGS1Q96RS0 853 aaKnown RBP21.72■■□□□ 1.07
USP53-203ENST00000507597 NRDE2Q9H7Z3 1164 aa21.72■■□□□ 1.07
USP53-203ENST00000507597 INTS13Q9NVM9 706 aa21.72■■□□□ 1.07
USP53-203ENST00000507597 TMEM265A0A087WTH1 108 aa21.71■■□□□ 1.07
USP53-203ENST00000507597 GOLGA6L19H0YKK7 550 aa21.71■■□□□ 1.07
USP53-203ENST00000507597 PHACTR2O75167 634 aa21.71■■□□□ 1.07
USP53-203ENST00000507597 CA3P07451 260 aa21.71■■□□□ 1.07
USP53-203ENST00000507597 CDK11BP21127 795 aaKnown RBP21.71■■□□□ 1.07
USP53-203ENST00000507597 DNAJB2P25686 324 aa21.71■■□□□ 1.07
USP53-203ENST00000507597 MARSP56192 900 aaKnown RBP21.71■■□□□ 1.07
USP53-203ENST00000507597 ZNF445P59923 1031 aa21.71■■□□□ 1.07
USP53-203ENST00000507597 KRT17Q04695 432 aa21.71■■□□□ 1.07
USP53-203ENST00000507597 DSC1Q08554 894 aa21.71■■□□□ 1.07
USP53-203ENST00000507597 BMS1Q14692 1282 aaKnown RBP21.71■■□□□ 1.07
USP53-203ENST00000507597 ZBTB6Q15916 424 aa21.71■■□□□ 1.07
USP53-203ENST00000507597 PPP2R2DQ66LE6 453 aa21.71■■□□□ 1.07
USP53-203ENST00000507597 COLGALT2Q8IYK4 626 aa21.71■■□□□ 1.07
USP53-203ENST00000507597 TIFAQ96CG3 184 aa21.71■■□□□ 1.07
USP53-203ENST00000507597 EEF2KMTQ96G04 330 aa21.71■■□□□ 1.07
USP53-203ENST00000507597 ZMAT2Q96NC0 199 aaKnown RBP21.71■■□□□ 1.07
USP53-203ENST00000507597 CWH43Q9H720 699 aa21.71■■□□□ 1.07
USP53-203ENST00000507597 DPP3Q9NY33 737 aa21.71■■□□□ 1.07
USP53-203ENST00000507597 ITGA11Q9UKX5 1188 aa21.71■■□□□ 1.07
USP53-203ENST00000507597 MRPL42Q9Y6G3 142 aaKnown RBP21.71■■□□□ 1.07
USP53-203ENST00000507597 COL4A6Q14031 1691 aa21.71■■□□□ 1.07
USP53-203ENST00000507597 ARHGEF37A1IGU5 675 aa21.7■■□□□ 1.06
USP53-203ENST00000507597 LINC01553A4QN01 128 aa21.7■■□□□ 1.06
USP53-203ENST00000507597 TRAPPC3O43617 180 aa21.7■■□□□ 1.06
USP53-203ENST00000507597 N4BP1O75113 896 aaKnown RBP21.7■■□□□ 1.06
USP53-203ENST00000507597 EEF1GP26641 437 aaKnown RBP21.7■■□□□ 1.06
USP53-203ENST00000507597 LRPAP1P30533 357 aa21.7■■□□□ 1.06
USP53-203ENST00000507597 BMPR1AP36894 532 aa21.7■■□□□ 1.06
USP53-203ENST00000507597 PNPLA4P41247 253 aa21.7■■□□□ 1.06
USP53-203ENST00000507597 MTIF2P46199 727 aaKnown RBP21.7■■□□□ 1.06
USP53-203ENST00000507597 BCAR1P56945 870 aa21.7■■□□□ 1.06
USP53-203ENST00000507597 TRPC3Q13507 836 aa21.7■■□□□ 1.06
USP53-203ENST00000507597 FAM109BQ6ICB4 259 aaPredicted RBP21.7■■□□□ 1.06
USP53-203ENST00000507597 DCLRE1AQ6PJP8 1040 aa21.7■■□□□ 1.06
USP53-203ENST00000507597 KCNT2Q6UVM3 1135 aa21.7■■□□□ 1.06
USP53-203ENST00000507597 SPG21Q9NZD8 308 aa21.7■■□□□ 1.06
USP53-203ENST00000507597 PUF60Q9UHX1 559 aaKnown RBP21.7■■□□□ 1.06
USP53-203ENST00000507597 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.7■■□□□ 1.06
USP53-203ENST00000507597 CITO14578 2027 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms