RNA–Protein interactions for RNA: ENST00000506089.1

SMARCAD1-205, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 4

Gene SMARCAD1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-205ENST00000506089 FSCN1Q16658 493 aaKnown RBP4.84□□□□□ -1.63
SMARCAD1-205ENST00000506089 MAMDC4Q6UXC1 1216 aa4.84□□□□□ -1.63
SMARCAD1-205ENST00000506089 USP45Q70EL2 814 aa4.84□□□□□ -1.63
SMARCAD1-205ENST00000506089 CLEC14AQ86T13 490 aa4.84□□□□□ -1.63
SMARCAD1-205ENST00000506089 DPP9Q86TI2 863 aa4.84□□□□□ -1.63
SMARCAD1-205ENST00000506089 COL23A1Q86Y22 540 aaPredicted RBP4.84□□□□□ -1.63
SMARCAD1-205ENST00000506089 DENND1CQ8IV53 801 aa4.84□□□□□ -1.63
SMARCAD1-205ENST00000506089 ZNF808Q8N4W9 903 aaPredicted RBP4.84□□□□□ -1.63
SMARCAD1-205ENST00000506089 SHCBP1Q8NEM2 672 aa4.84□□□□□ -1.63
SMARCAD1-205ENST00000506089 PPP1R35Q8TAP8 253 aa4.84□□□□□ -1.63
SMARCAD1-205ENST00000506089 MVB12AQ96EY5 273 aa4.84□□□□□ -1.63
SMARCAD1-205ENST00000506089 RPL10LQ96L21 214 aaKnown RBP4.84□□□□□ -1.63
SMARCAD1-205ENST00000506089 NUP62CLQ9H1M0 184 aa4.84□□□□□ -1.63
SMARCAD1-205ENST00000506089 POLR3BQ9NW08 1133 aaPredicted RBP4.84□□□□□ -1.63
SMARCAD1-205ENST00000506089 PLA2G3Q9NZ20 509 aa4.84□□□□□ -1.63
SMARCAD1-205ENST00000506089 C9orf78Q9NZ63 289 aaPredicted RBP4.84□□□□□ -1.63
SMARCAD1-205ENST00000506089 LRCH1Q9Y2L9 728 aa4.84□□□□□ -1.63
SMARCAD1-205ENST00000506089 RASA4BC9J798 803 aa4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 RASA4O43374 803 aa4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 OPHN1O60890 802 aa4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 NDUFS2O75306 463 aa4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 PDCP20941 246 aa4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 RPS19P39019 145 aaKnown RBP4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 SLC5A3P53794 718 aa4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 SLC16A1P53985 500 aa4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 CCT2P78371 535 aaKnown RBP4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 MRPS9P82933 396 aaKnown RBP4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 KIF23Q02241 960 aaPredicted RBP4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 PUM3Q15397 648 aaKnown RBP4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 UGT8Q16880 541 aa4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 PITRM1Q5JRX3 1037 aa4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 L1TD1Q5T7N2 865 aaKnown RBP4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 CCDC62Q6P9F0 684 aa4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 KCNK18Q7Z418 384 aa4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 POLNQ7Z5Q5 900 aa4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 ADGRE4PQ86SQ3 457 aa4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 CXorf67Q86X51 503 aaPredicted RBP4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 KIAA0319LQ8IZA0 1049 aa4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 KRT78Q8N1N4 520 aa4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 TMTC2Q8N394 836 aa4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 PRR18Q8N4B5 295 aa4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 ANKRD53Q8N9V6 530 aa4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 CCT6BQ92526 530 aa4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 SLC7A6OSQ96CW6 309 aaPredicted RBP4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 TMEM176AQ96HP8 235 aa4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 TBCBQ99426 244 aa4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 SLC6A15Q9H2J7 730 aa4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 TESMINQ9Y4I5 508 aa4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 RPS6KL1Q9Y6S9 549 aa4.83□□□□□ -1.64
SMARCAD1-205ENST00000506089 PCSK5Q92824 1860 aa4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 MYPNQ86TC9 1320 aa4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 PMS2P1A4D2B8 440 aa4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 B3GALT2O43825 422 aa4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 MGEA5O60502 916 aa4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 UBXN7O94888 489 aa4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 PCDH8O95206 1070 aa4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 HSD3B1P14060 373 aa4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 GRK6P43250 576 aa4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 MANFP55145 182 aaKnown RBP4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 BPIFB4P59827 614 aa4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 TRIM25Q14258 630 aaKnown RBP4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 PGS1Q32NB8 556 aa4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 UAP1L1Q3KQV9 507 aa4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 RNF220Q5VTB9 566 aa4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 TIGD7Q6NT04 549 aaPredicted RBP4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 LYSMD2Q8IV50 215 aa4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 PLA2G15Q8NCC3 412 aa4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 PIK3C3Q8NEB9 887 aa4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 PPHLN1Q8NEY8 458 aaKnown RBP4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 RABGGTAQ92696 567 aa4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 RPGRQ92834 1020 aaKnown RBP4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 EDAQ92838 391 aa4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 GFM2Q969S9 779 aaKnown RBP4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 COA7Q96BR5 231 aa4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 CHFRQ96EP1 664 aa4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 RAX2Q96IS3 184 aa4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 MPP4Q96JB8 637 aa4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 TBATAQ96M53 351 aa4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 WDR92Q96MX6 357 aa4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 ZNF341Q9BYN7 854 aa4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 WDR12Q9GZL7 423 aaKnown RBP4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 WNT8AQ9H1J5 351 aa4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 RSAD1Q9HA92 442 aa4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 TMPRSS11EQ9UL52 423 aa4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 L1RE1Q9UN81 338 aa4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 PCDHGB6Q9Y5F9 930 aa4.82□□□□□ -1.64
SMARCAD1-205ENST00000506089 CAPN8A6NHC0 703 aa4.81□□□□□ -1.64
SMARCAD1-205ENST00000506089 NPIPB8E9PQR5 432 aa4.81□□□□□ -1.64
SMARCAD1-205ENST00000506089 TLR5O60602 858 aa4.81□□□□□ -1.64
SMARCAD1-205ENST00000506089 TOX4O94842 621 aa4.81□□□□□ -1.64
SMARCAD1-205ENST00000506089 PFKMP08237 780 aa4.81□□□□□ -1.64
SMARCAD1-205ENST00000506089 IL12RB1P42701 662 aa4.81□□□□□ -1.64
SMARCAD1-205ENST00000506089 SESN2P58004 480 aaPredicted RBP4.81□□□□□ -1.64
SMARCAD1-205ENST00000506089 TRIM14Q14142 442 aa4.81□□□□□ -1.64
SMARCAD1-205ENST00000506089 GRM7Q14831 915 aa4.81□□□□□ -1.64
SMARCAD1-205ENST00000506089 PRKD1Q15139 912 aaPredicted RBP4.81□□□□□ -1.64
SMARCAD1-205ENST00000506089 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.81□□□□□ -1.64
SMARCAD1-205ENST00000506089 SLC4A8Q2Y0W8 1093 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms