RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 SAAL1Q96ER3 474 aa12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 DHTKD1Q96HY7 919 aaPredicted RBP12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 FAM193BQ96PV7 902 aaPredicted RBP12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 PPP1R10Q96QC0 940 aaKnown RBP12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 FAM213AQ9BRX8 229 aa12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 C17orf80Q9BSJ5 609 aa12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 PLVAPQ9BX97 442 aa12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 CXCL16Q9H2A7 254 aa12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 TTYH1Q9H313 450 aaPredicted RBP12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 SEMA6BQ9H3T3 888 aa12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 ASB7Q9H672 318 aa12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 DMAC2Q9NW81 257 aa12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 HCSTQ9UBK5 93 aa12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 PLAGL2Q9UPG8 496 aa12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 GOLGA8IPA6NC78 632 aa12.94□□□□□ -0.34
PDLIM5-208ENST00000504489 ZNF233A6NK53 670 aa12.94□□□□□ -0.34
PDLIM5-208ENST00000504489 GOLGA8JA6NMD2 632 aa12.94□□□□□ -0.34
PDLIM5-208ENST00000504489 LACTBL1A8MY62 500 aa12.94□□□□□ -0.34
PDLIM5-208ENST00000504489 PPP1R3GB7ZBB8 358 aa12.94□□□□□ -0.34
PDLIM5-208ENST00000504489 PSMA7O14818 248 aa12.94□□□□□ -0.34
PDLIM5-208ENST00000504489 IL18RAPO95256 599 aa12.94□□□□□ -0.34
PDLIM5-208ENST00000504489 BCAR1P56945 870 aa12.94□□□□□ -0.34
PDLIM5-208ENST00000504489 PPP2R3AQ06190 1150 aa12.94□□□□□ -0.34
PDLIM5-208ENST00000504489 TUSC3Q13454 348 aa12.94□□□□□ -0.34
PDLIM5-208ENST00000504489 ZBTB6Q15916 424 aa12.94□□□□□ -0.34
PDLIM5-208ENST00000504489 KLHL40Q2TBA0 621 aa12.94□□□□□ -0.34
PDLIM5-208ENST00000504489 EDRF1Q3B7T1 1238 aa12.94□□□□□ -0.34
PDLIM5-208ENST00000504489 EPC2Q52LR7 807 aa12.94□□□□□ -0.34
PDLIM5-208ENST00000504489 CCDC183Q5T5S1 534 aa12.94□□□□□ -0.34
PDLIM5-208ENST00000504489 FOXR2Q6PJQ5 311 aa12.94□□□□□ -0.34
PDLIM5-208ENST00000504489 KCNT2Q6UVM3 1135 aa12.94□□□□□ -0.34
PDLIM5-208ENST00000504489 SPRED2Q7Z698 418 aa12.94□□□□□ -0.34
PDLIM5-208ENST00000504489 BRSK2Q8IWQ3 736 aa12.94□□□□□ -0.34
PDLIM5-208ENST00000504489 COLGALT2Q8IYK4 626 aa12.94□□□□□ -0.34
PDLIM5-208ENST00000504489 COLGALT1Q8NBJ5 622 aa12.94□□□□□ -0.34
PDLIM5-208ENST00000504489 P2RX5Q93086 422 aa12.94□□□□□ -0.34
PDLIM5-208ENST00000504489 ZMAT2Q96NC0 199 aaKnown RBP12.94□□□□□ -0.34
PDLIM5-208ENST00000504489 ZNF558Q96NG5 402 aa12.94□□□□□ -0.34
PDLIM5-208ENST00000504489 TMEM175Q9BSA9 504 aa12.94□□□□□ -0.34
PDLIM5-208ENST00000504489 SLC38A7Q9NVC3 462 aa12.94□□□□□ -0.34
PDLIM5-208ENST00000504489 DERAQ9Y315 318 aa12.94□□□□□ -0.34
PDLIM5-208ENST00000504489 PCDHB12Q9Y5F1 795 aa12.94□□□□□ -0.34
PDLIM5-208ENST00000504489 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.94□□□□□ -0.34
PDLIM5-208ENST00000504489 B4GALT3O60512 393 aa12.93□□□□□ -0.34
PDLIM5-208ENST00000504489 ZC3H11AO75152 810 aaKnown RBP eCLIP12.93□□□□□ -0.34
PDLIM5-208ENST00000504489 NR3C1P04150 777 aa12.93□□□□□ -0.34
PDLIM5-208ENST00000504489 ALDH2P05091 517 aa12.93□□□□□ -0.34
PDLIM5-208ENST00000504489 GALTP07902 379 aa12.93□□□□□ -0.34
PDLIM5-208ENST00000504489 CCNE1P24864 410 aa12.93□□□□□ -0.34
PDLIM5-208ENST00000504489 RPL13P26373 211 aaKnown RBP12.93□□□□□ -0.34
PDLIM5-208ENST00000504489 CTNNB1P35222 781 aa12.93□□□□□ -0.34
PDLIM5-208ENST00000504489 ALDH7A1P49419 539 aaKnown RBP12.93□□□□□ -0.34
PDLIM5-208ENST00000504489 CYP2J2P51589 502 aa12.93□□□□□ -0.34
PDLIM5-208ENST00000504489 GLRA4Q5JXX5 417 aa12.93□□□□□ -0.34
PDLIM5-208ENST00000504489 MLKLQ8NB16 471 aa12.93□□□□□ -0.34
PDLIM5-208ENST00000504489 SYAP1Q96A49 352 aaPredicted RBP12.93□□□□□ -0.34
PDLIM5-208ENST00000504489 RBAKQ9NYW8 714 aaPredicted RBP12.93□□□□□ -0.34
PDLIM5-208ENST00000504489 TMEM63CQ9P1W3 806 aa12.93□□□□□ -0.34
PDLIM5-208ENST00000504489 DNAJB4Q9UDY4 337 aa12.93□□□□□ -0.34
PDLIM5-208ENST00000504489 H3BNC9 293 aa12.92□□□□□ -0.34
PDLIM5-208ENST00000504489 XPOTO43592 962 aaKnown RBP12.92□□□□□ -0.34
PDLIM5-208ENST00000504489 EXOC3O60645 756 aa12.92□□□□□ -0.34
PDLIM5-208ENST00000504489 HOXB1P14653 301 aaPredicted RBP12.92□□□□□ -0.34
PDLIM5-208ENST00000504489 CYP3A5P20815 502 aa12.92□□□□□ -0.34
PDLIM5-208ENST00000504489 PPM1AP35813 382 aa12.92□□□□□ -0.34
PDLIM5-208ENST00000504489 SLC11A1P49279 550 aa12.92□□□□□ -0.34
PDLIM5-208ENST00000504489 NLRP12P59046 1061 aa12.92□□□□□ -0.34
PDLIM5-208ENST00000504489 LRRC63Q05C16 580 aa12.92□□□□□ -0.34
PDLIM5-208ENST00000504489 SURF1Q15526 300 aa12.92□□□□□ -0.34
PDLIM5-208ENST00000504489 SNRNP35Q16560 246 aaKnown RBP12.92□□□□□ -0.34
PDLIM5-208ENST00000504489 SKOR2Q2VWA4 1001 aaPredicted RBP12.92□□□□□ -0.34
PDLIM5-208ENST00000504489 ANKRD40Q6AI12 368 aa12.92□□□□□ -0.34
PDLIM5-208ENST00000504489 NT5DC4Q86YG4 428 aa12.92□□□□□ -0.34
PDLIM5-208ENST00000504489 CBWD2Q8IUF1 395 aa12.92□□□□□ -0.34
PDLIM5-208ENST00000504489 SLC39A11Q8N1S5 342 aa12.92□□□□□ -0.34
PDLIM5-208ENST00000504489 NOC3LQ8WTT2 800 aaKnown RBP12.92□□□□□ -0.34
PDLIM5-208ENST00000504489 ARNTL2Q8WYA1 636 aa12.92□□□□□ -0.34
PDLIM5-208ENST00000504489 MFSD14AQ96MC6 490 aa12.92□□□□□ -0.34
PDLIM5-208ENST00000504489 TSG101Q99816 390 aa12.92□□□□□ -0.34
PDLIM5-208ENST00000504489 C11orf84Q9BUA3 381 aaPredicted RBP12.92□□□□□ -0.34
PDLIM5-208ENST00000504489 CERS4Q9HA82 394 aa12.92□□□□□ -0.34
PDLIM5-208ENST00000504489 SPG21Q9NZD8 308 aa12.92□□□□□ -0.34
PDLIM5-208ENST00000504489 MTUS1Q9ULD2 1270 aa12.92□□□□□ -0.34
PDLIM5-208ENST00000504489 FAN1Q9Y2M0 1017 aa12.92□□□□□ -0.34
PDLIM5-208ENST00000504489 C2CD2Q9Y426 696 aa12.92□□□□□ -0.34
PDLIM5-208ENST00000504489 SZT2Q5T011 3432 aa12.92□□□□□ -0.34
PDLIM5-208ENST00000504489 TSC2P49815 1807 aa12.91□□□□□ -0.34
PDLIM5-208ENST00000504489 BICDL2A1A5D9 508 aa12.91□□□□□ -0.34
PDLIM5-208ENST00000504489 NRP1O14786 923 aa12.91□□□□□ -0.34
PDLIM5-208ENST00000504489 MAPK13O15264 365 aa12.91□□□□□ -0.34
PDLIM5-208ENST00000504489 FGF18O76093 207 aa12.91□□□□□ -0.34
PDLIM5-208ENST00000504489 NR2F2P24468 414 aa12.91□□□□□ -0.34
PDLIM5-208ENST00000504489 OR1G1P47890 313 aa12.91□□□□□ -0.34
PDLIM5-208ENST00000504489 PMS1P54277 932 aaKnown RBP12.91□□□□□ -0.34
PDLIM5-208ENST00000504489 FKBP3Q00688 224 aaKnown RBP12.91□□□□□ -0.34
PDLIM5-208ENST00000504489 PLCB3Q01970 1234 aa12.91□□□□□ -0.34
PDLIM5-208ENST00000504489 SOX4Q06945 474 aaPredicted RBP12.91□□□□□ -0.34
PDLIM5-208ENST00000504489 CYP24A1Q07973 514 aa12.91□□□□□ -0.34
PDLIM5-208ENST00000504489 ADAM9Q13443 819 aa12.91□□□□□ -0.34
PDLIM5-208ENST00000504489 GPM6BQ13491 265 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms