RNA–Protein interactions for RNA: ENST00000504274.1

COPS4-203, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-203ENST00000504274 IFIT1BQ5T764 474 aaKnown RBP6.62□□□□□ -1.35
COPS4-203ENST00000504274 PPP4R3AQ6IN85 833 aa6.62□□□□□ -1.35
COPS4-203ENST00000504274 TTC7BQ86TV6 843 aa6.62□□□□□ -1.35
COPS4-203ENST00000504274 CHPFQ8IZ52 775 aa6.62□□□□□ -1.35
COPS4-203ENST00000504274 ZFP28Q8NHY6 868 aa6.62□□□□□ -1.35
COPS4-203ENST00000504274 TSR2Q969E8 191 aaKnown RBP6.62□□□□□ -1.35
COPS4-203ENST00000504274 MVB12AQ96EY5 273 aa6.62□□□□□ -1.35
COPS4-203ENST00000504274 PHACTR3Q96KR7 559 aa6.62□□□□□ -1.35
COPS4-203ENST00000504274 VRK1Q99986 396 aaPredicted RBP6.62□□□□□ -1.35
COPS4-203ENST00000504274 TEX101Q9BY14 249 aa6.62□□□□□ -1.35
COPS4-203ENST00000504274 C11orf54Q9H0W9 315 aaPredicted RBP6.62□□□□□ -1.35
COPS4-203ENST00000504274 SORCS3Q9UPU3 1222 aa6.62□□□□□ -1.35
COPS4-203ENST00000504274 CLCA2Q9UQC9 943 aa6.62□□□□□ -1.35
COPS4-203ENST00000504274 TEX33O43247 280 aa6.61□□□□□ -1.35
COPS4-203ENST00000504274 AP1G1O43747 822 aa6.61□□□□□ -1.35
COPS4-203ENST00000504274 PRSS23O95084 383 aa6.61□□□□□ -1.35
COPS4-203ENST00000504274 SLC6A4P31645 630 aa6.61□□□□□ -1.35
COPS4-203ENST00000504274 CYP2C19P33261 490 aa6.61□□□□□ -1.35
COPS4-203ENST00000504274 RNASE9P60153 205 aaKnown RBP6.61□□□□□ -1.35
COPS4-203ENST00000504274 SNAPC2Q13487 334 aa6.61□□□□□ -1.35
COPS4-203ENST00000504274 RAB39AQ14964 217 aa6.61□□□□□ -1.35
COPS4-203ENST00000504274 ATAT1Q5SQI0 421 aa6.61□□□□□ -1.35
COPS4-203ENST00000504274 MED25Q71SY5 747 aa6.61□□□□□ -1.35
COPS4-203ENST00000504274 EPM2AIP1Q7L775 607 aaPredicted RBP6.61□□□□□ -1.35
COPS4-203ENST00000504274 GRAMD1CQ8IYS0 662 aa6.61□□□□□ -1.35
COPS4-203ENST00000504274 ZNF768Q9H5H4 540 aaKnown RBP6.61□□□□□ -1.35
COPS4-203ENST00000504274 EIF2B4Q9UI10 523 aaKnown RBP6.61□□□□□ -1.35
COPS4-203ENST00000504274 AHRRA9YTQ3 701 aa6.6□□□□□ -1.35
COPS4-203ENST00000504274 KIAA0391O15091 583 aaKnown RBP6.6□□□□□ -1.35
COPS4-203ENST00000504274 ZNF185O15231 689 aa6.6□□□□□ -1.35
COPS4-203ENST00000504274 TSPAN6O43657 245 aa6.6□□□□□ -1.35
COPS4-203ENST00000504274 OFD1O75665 1012 aa6.6□□□□□ -1.35
COPS4-203ENST00000504274 POMCP01189 267 aa6.6□□□□□ -1.35
COPS4-203ENST00000504274 MALP21145 153 aa6.6□□□□□ -1.35
COPS4-203ENST00000504274 MAP2K6P52564 334 aa6.6□□□□□ -1.35
COPS4-203ENST00000504274 UBXN2BQ14CS0 331 aa6.6□□□□□ -1.35
COPS4-203ENST00000504274 PGS1Q32NB8 556 aa6.6□□□□□ -1.35
COPS4-203ENST00000504274 RABL3Q5HYI8 236 aa6.6□□□□□ -1.35
COPS4-203ENST00000504274 DACT2Q5SW24 774 aa6.6□□□□□ -1.35
COPS4-203ENST00000504274 FAM102AQ5T9C2 384 aaPredicted RBP6.6□□□□□ -1.35
COPS4-203ENST00000504274 B3GNT9Q6UX72 402 aa6.6□□□□□ -1.35
COPS4-203ENST00000504274 GADL1Q6ZQY3 521 aa6.6□□□□□ -1.35
COPS4-203ENST00000504274 CPT1CQ8TCG5 803 aa6.6□□□□□ -1.35
COPS4-203ENST00000504274 ZNF703Q9H7S9 590 aaPredicted RBP6.6□□□□□ -1.35
COPS4-203ENST00000504274 AURKAIP1Q9NWT8 199 aaPredicted RBP6.6□□□□□ -1.35
COPS4-203ENST00000504274 CALCOCO1Q9P1Z2 691 aa6.6□□□□□ -1.35
COPS4-203ENST00000504274 TCEAL9Q9UHQ7 104 aa6.6□□□□□ -1.35
COPS4-203ENST00000504274 PCDHA3Q9Y5H8 950 aa6.6□□□□□ -1.35
COPS4-203ENST00000504274 MATN3O15232 486 aa6.59□□□□□ -1.35
COPS4-203ENST00000504274 GRM6O15303 877 aa6.59□□□□□ -1.35
COPS4-203ENST00000504274 DTNBO60941 627 aa6.59□□□□□ -1.35
COPS4-203ENST00000504274 ALDH2P05091 517 aa6.59□□□□□ -1.35
COPS4-203ENST00000504274 ITGB1P05556 798 aa6.59□□□□□ -1.35
COPS4-203ENST00000504274 FAM189BP81408 668 aa6.59□□□□□ -1.35
COPS4-203ENST00000504274 FOXE3Q13461 319 aa6.59□□□□□ -1.35
COPS4-203ENST00000504274 FLYWCH1Q4VC44 716 aa6.59□□□□□ -1.35
COPS4-203ENST00000504274 FAM102BQ5T8I3 360 aa6.59□□□□□ -1.35
COPS4-203ENST00000504274 GGNQ86UU5 652 aa6.59□□□□□ -1.35
COPS4-203ENST00000504274 CACTINQ8WUQ7 758 aaKnown RBP6.59□□□□□ -1.35
COPS4-203ENST00000504274 RGMAQ96B86 450 aa6.59□□□□□ -1.35
COPS4-203ENST00000504274 ZNF503Q96F45 646 aa6.59□□□□□ -1.35
COPS4-203ENST00000504274 AIFM3Q96NN9 605 aa6.59□□□□□ -1.35
COPS4-203ENST00000504274 PLEKHG4BQ96PX9 1271 aa6.59□□□□□ -1.35
COPS4-203ENST00000504274 MAP3K14Q99558 947 aa6.59□□□□□ -1.35
COPS4-203ENST00000504274 GSTO2Q9H4Y5 243 aa6.59□□□□□ -1.35
COPS4-203ENST00000504274 FAM30AQ9NZY2 134 aa6.59□□□□□ -1.35
COPS4-203ENST00000504274 CHST2Q9Y4C5 530 aa6.59□□□□□ -1.35
COPS4-203ENST00000504274 CCDC78A2IDD5 438 aa6.58□□□□□ -1.36
COPS4-203ENST00000504274 NT5C1B-RDH14C9J2C7 533 aa6.58□□□□□ -1.36
COPS4-203ENST00000504274 SCAF4O95104 1147 aaKnown RBP6.58□□□□□ -1.36
COPS4-203ENST00000504274 AMHP03971 560 aa6.58□□□□□ -1.36
COPS4-203ENST00000504274 CD1AP06126 327 aa6.58□□□□□ -1.36
COPS4-203ENST00000504274 MYBP10242 640 aa6.58□□□□□ -1.36
COPS4-203ENST00000504274 NR4A1P22736 598 aa6.58□□□□□ -1.36
COPS4-203ENST00000504274 MGAT1P26572 445 aa6.58□□□□□ -1.36
COPS4-203ENST00000504274 ZFP36P26651 326 aaKnown RBP6.58□□□□□ -1.36
COPS4-203ENST00000504274 CREMQ03060 361 aa6.58□□□□□ -1.36
COPS4-203ENST00000504274 NOGQ13253 232 aa6.58□□□□□ -1.36
COPS4-203ENST00000504274 PUM1Q14671 1186 aaKnown RBP eCLIP6.58□□□□□ -1.36
COPS4-203ENST00000504274 PDCD4Q53EL6 469 aaKnown RBP6.58□□□□□ -1.36
COPS4-203ENST00000504274 ZFPM1Q8IX07 1006 aa6.58□□□□□ -1.36
COPS4-203ENST00000504274 C3orf20Q8ND61 904 aa6.58□□□□□ -1.36
COPS4-203ENST00000504274 SLC35G2Q8TBE7 412 aa6.58□□□□□ -1.36
COPS4-203ENST00000504274 DIS3LQ8TF46 1054 aaKnown RBP6.58□□□□□ -1.36
COPS4-203ENST00000504274 CLIP3Q96DZ5 547 aa6.58□□□□□ -1.36
COPS4-203ENST00000504274 KRTAP9-3Q9BYQ3 159 aa6.58□□□□□ -1.36
COPS4-203ENST00000504274 TRPM5Q9NZQ8 1165 aa6.58□□□□□ -1.36
COPS4-203ENST00000504274 MYRFQ9Y2G1 1151 aa6.58□□□□□ -1.36
COPS4-203ENST00000504274 USP15Q9Y4E8 981 aaPredicted RBP6.58□□□□□ -1.36
COPS4-203ENST00000504274 CDHR4A6H8M9 788 aa6.57□□□□□ -1.36
COPS4-203ENST00000504274 F2RL2O00254 374 aa6.57□□□□□ -1.36
COPS4-203ENST00000504274 TRIM24O15164 1050 aa6.57□□□□□ -1.36
COPS4-203ENST00000504274 PARNO95453 639 aaKnown RBP6.57□□□□□ -1.36
COPS4-203ENST00000504274 FTLP02792 175 aaPredicted RBP6.57□□□□□ -1.36
COPS4-203ENST00000504274 RPLP2P05387 115 aaKnown RBP6.57□□□□□ -1.36
COPS4-203ENST00000504274 HSPA6P17066 643 aa6.57□□□□□ -1.36
COPS4-203ENST00000504274 HK3P52790 923 aa6.57□□□□□ -1.36
COPS4-203ENST00000504274 GTF2H3Q13889 308 aa6.57□□□□□ -1.36
COPS4-203ENST00000504274 PABPC1LQ4VXU2 614 aaKnown RBP6.57□□□□□ -1.36
COPS4-203ENST00000504274 MIIPQ5JXC2 388 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms