RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 AFMIDQ63HM1 303 aa6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 MAEAQ7L5Y9 396 aa6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 KIAA0319LQ8IZA0 1049 aa6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 TTC9BQ8N6N2 239 aa6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 GIMAP8Q8ND71 665 aaPredicted RBP6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 IFI44Q8TCB0 444 aa6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 PARD3BQ8TEW8 1205 aa6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 FAM167AQ96KS9 214 aa6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 NT5C1BQ96P26 610 aa6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 RPS6KC1Q96S38 1066 aa6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 DMRTA2Q96SC8 542 aa6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 SARS2Q9NP81 518 aaKnown RBP6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 DDX21Q9NR30 783 aaKnown RBP eCLIP6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 CHST12Q9NRB3 414 aa6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 OAZ3Q9UMX2 235 aa6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 L1RE1Q9UN81 338 aa6.17□□□□□ -1.42
TRAPPC13-205ENST00000504243 KRTAP4-8A0A0G2JLE6 195 aa6.16□□□□□ -1.42
TRAPPC13-205ENST00000504243 ANO9A1A5B4 782 aa6.16□□□□□ -1.42
TRAPPC13-205ENST00000504243 PRRG2O14669 202 aa6.16□□□□□ -1.42
TRAPPC13-205ENST00000504243 TYRP14679 529 aa6.16□□□□□ -1.42
TRAPPC13-205ENST00000504243 ATP5JP18859 108 aa6.16□□□□□ -1.42
TRAPPC13-205ENST00000504243 GUCY1A2P33402 732 aa6.16□□□□□ -1.42
TRAPPC13-205ENST00000504243 AGFG1P52594 562 aaKnown RBP6.16□□□□□ -1.42
TRAPPC13-205ENST00000504243 CTXN1P60606 82 aa6.16□□□□□ -1.42
TRAPPC13-205ENST00000504243 SP140Q13342 867 aa6.16□□□□□ -1.42
TRAPPC13-205ENST00000504243 FAM214AQ32MH5 1076 aa6.16□□□□□ -1.42
TRAPPC13-205ENST00000504243 KHDC1LQ5JSQ8 128 aa6.16□□□□□ -1.42
TRAPPC13-205ENST00000504243 ZNF572Q7Z3I7 529 aaPredicted RBP6.16□□□□□ -1.42
TRAPPC13-205ENST00000504243 ADGRE4PQ86SQ3 457 aa6.16□□□□□ -1.42
TRAPPC13-205ENST00000504243 TAX1BP1Q86VP1 789 aa6.16□□□□□ -1.42
TRAPPC13-205ENST00000504243 COL23A1Q86Y22 540 aaPredicted RBP6.16□□□□□ -1.42
TRAPPC13-205ENST00000504243 FAM43AQ8N2R8 423 aa6.16□□□□□ -1.42
TRAPPC13-205ENST00000504243 CHST13Q8NET6 341 aa6.16□□□□□ -1.42
TRAPPC13-205ENST00000504243 PLBD2Q8NHP8 589 aa6.16□□□□□ -1.42
TRAPPC13-205ENST00000504243 CASKIN2Q8WXE0 1202 aa6.16□□□□□ -1.42
TRAPPC13-205ENST00000504243 LRTOMTQ8WZ04 291 aa6.16□□□□□ -1.42
TRAPPC13-205ENST00000504243 PMM1Q92871 262 aa6.16□□□□□ -1.42
TRAPPC13-205ENST00000504243 CEP95Q96GE4 821 aa6.16□□□□□ -1.42
TRAPPC13-205ENST00000504243 LOXL4Q96JB6 756 aa6.16□□□□□ -1.42
TRAPPC13-205ENST00000504243 TNIP3Q96KP6 325 aa6.16□□□□□ -1.42
TRAPPC13-205ENST00000504243 PTPN18Q99952 460 aa6.16□□□□□ -1.42
TRAPPC13-205ENST00000504243 MRI1Q9BV20 369 aa6.16□□□□□ -1.42
TRAPPC13-205ENST00000504243 C11orf54Q9H0W9 315 aaPredicted RBP6.16□□□□□ -1.42
TRAPPC13-205ENST00000504243 BHMT2Q9H2M3 363 aa6.16□□□□□ -1.42
TRAPPC13-205ENST00000504243 TPCN1Q9ULQ1 816 aa6.16□□□□□ -1.42
TRAPPC13-205ENST00000504243 PCDHA6Q9UN73 950 aa6.16□□□□□ -1.42
TRAPPC13-205ENST00000504243 A0A088AWK7 358 aa6.15□□□□□ -1.42
TRAPPC13-205ENST00000504243 GPR42O15529 346 aa6.15□□□□□ -1.42
TRAPPC13-205ENST00000504243 HRGP04196 525 aa6.15□□□□□ -1.42
TRAPPC13-205ENST00000504243 CD1AP06126 327 aa6.15□□□□□ -1.42
TRAPPC13-205ENST00000504243 KITP10721 976 aa6.15□□□□□ -1.42
TRAPPC13-205ENST00000504243 RPS19P39019 145 aaKnown RBP6.15□□□□□ -1.42
TRAPPC13-205ENST00000504243 FLT3LGP49771 235 aa6.15□□□□□ -1.42
TRAPPC13-205ENST00000504243 EFEMP1Q12805 493 aa6.15□□□□□ -1.42
TRAPPC13-205ENST00000504243 FAM47AQ5JRC9 791 aa6.15□□□□□ -1.42
TRAPPC13-205ENST00000504243 MFSD14BQ5SR56 506 aa6.15□□□□□ -1.42
TRAPPC13-205ENST00000504243 FAM111BQ6SJ93 734 aa6.15□□□□□ -1.42
TRAPPC13-205ENST00000504243 SVIPQ8NHG7 77 aa6.15□□□□□ -1.42
TRAPPC13-205ENST00000504243 BRIX1Q8TDN6 353 aaKnown RBP6.15□□□□□ -1.42
TRAPPC13-205ENST00000504243 CFHR4Q92496 578 aa6.15□□□□□ -1.42
TRAPPC13-205ENST00000504243 TNPO1Q92973 898 aaKnown RBP6.15□□□□□ -1.42
TRAPPC13-205ENST00000504243 OR14A2Q96R54 314 aa6.15□□□□□ -1.42
TRAPPC13-205ENST00000504243 WDCPQ9H6R7 721 aa6.15□□□□□ -1.42
TRAPPC13-205ENST00000504243 SPON1Q9HCB6 807 aa6.15□□□□□ -1.42
TRAPPC13-205ENST00000504243 GNL3LQ9NVN8 582 aaKnown RBP6.15□□□□□ -1.42
TRAPPC13-205ENST00000504243 SMPD4Q9NXE4 827 aa6.15□□□□□ -1.42
TRAPPC13-205ENST00000504243 SNX13Q9Y5W8 968 aa6.15□□□□□ -1.42
TRAPPC13-205ENST00000504243 NCANO14594 1321 aa6.15□□□□□ -1.43
TRAPPC13-205ENST00000504243 TCRBV7S2A1N4TA0A589 114 aa6.14□□□□□ -1.43
TRAPPC13-205ENST00000504243 KRTAP9-7A8MTY7 169 aa6.14□□□□□ -1.43
TRAPPC13-205ENST00000504243 MATN2O00339 956 aa6.14□□□□□ -1.43
TRAPPC13-205ENST00000504243 PHGDHO43175 533 aaKnown RBP6.14□□□□□ -1.43
TRAPPC13-205ENST00000504243 HOXA3O43365 443 aaPredicted RBP6.14□□□□□ -1.43
TRAPPC13-205ENST00000504243 STC2O76061 302 aa6.14□□□□□ -1.43
TRAPPC13-205ENST00000504243 GNAI3P08754 354 aa6.14□□□□□ -1.43
TRAPPC13-205ENST00000504243 ALOX15P16050 662 aaPredicted RBP6.14□□□□□ -1.43
TRAPPC13-205ENST00000504243 KCNJ5P48544 419 aa6.14□□□□□ -1.43
TRAPPC13-205ENST00000504243 GNAI1P63096 354 aa6.14□□□□□ -1.43
TRAPPC13-205ENST00000504243 ADAM8P78325 824 aa6.14□□□□□ -1.43
TRAPPC13-205ENST00000504243 NKX6-1P78426 367 aaPredicted RBP6.14□□□□□ -1.43
TRAPPC13-205ENST00000504243 ATP8B2P98198 1209 aa6.14□□□□□ -1.43
TRAPPC13-205ENST00000504243 MRPL49Q13405 166 aaKnown RBP6.14□□□□□ -1.43
TRAPPC13-205ENST00000504243 GRM7Q14831 915 aa6.14□□□□□ -1.43
TRAPPC13-205ENST00000504243 FKBP15Q5T1M5 1219 aa6.14□□□□□ -1.43
TRAPPC13-205ENST00000504243 ZNF529Q6P280 563 aa6.14□□□□□ -1.43
TRAPPC13-205ENST00000504243 UBE3BQ7Z3V4 1068 aa6.14□□□□□ -1.43
TRAPPC13-205ENST00000504243 C11orf96Q7Z7L8 435 aa6.14□□□□□ -1.43
TRAPPC13-205ENST00000504243 XYLT1Q86Y38 959 aa6.14□□□□□ -1.43
TRAPPC13-205ENST00000504243 DNERQ8NFT8 737 aa6.14□□□□□ -1.43
TRAPPC13-205ENST00000504243 GNRHR2Q96P88 292 aa6.14□□□□□ -1.43
TRAPPC13-205ENST00000504243 MYOCQ99972 504 aa6.14□□□□□ -1.43
TRAPPC13-205ENST00000504243 C1orf43Q9BWL3 253 aa6.14□□□□□ -1.43
TRAPPC13-205ENST00000504243 PACSIN1Q9BY11 444 aa6.14□□□□□ -1.43
TRAPPC13-205ENST00000504243 NUP62CLQ9H1M0 184 aa6.14□□□□□ -1.43
TRAPPC13-205ENST00000504243 NELFAQ9H3P2 528 aa6.14□□□□□ -1.43
TRAPPC13-205ENST00000504243 AGO3Q9H9G7 860 aaKnown RBP6.14□□□□□ -1.43
TRAPPC13-205ENST00000504243 ZMAT3Q9HA38 289 aaKnown RBP6.14□□□□□ -1.43
TRAPPC13-205ENST00000504243 COMMD10Q9Y6G5 202 aa6.14□□□□□ -1.43
TRAPPC13-205ENST00000504243 CXorf49A8MYA2 514 aaPredicted RBP6.13□□□□□ -1.43
TRAPPC13-205ENST00000504243 PATE3B3GLJ2 98 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms