RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 ZSCAN20P17040 1043 aaPredicted RBP4.1□□□□□ -1.75
USP46-205ENST00000504078 TGM1P22735 817 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 NOS3P29474 1203 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 ALDH7A1P49419 539 aaKnown RBP4.1□□□□□ -1.75
USP46-205ENST00000504078 GPC3P51654 580 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 CRYBB1P53674 252 aaPredicted RBP4.1□□□□□ -1.75
USP46-205ENST00000504078 GPC5P78333 572 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 PRKCEQ02156 737 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 PTH1RQ03431 593 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 TROAPQ12815 778 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 SFSWAPQ12872 951 aaKnown RBP4.1□□□□□ -1.75
USP46-205ENST00000504078 GRM2Q14416 872 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 ACAP1Q15027 740 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 SF3A2Q15428 464 aaKnown RBP4.1□□□□□ -1.75
USP46-205ENST00000504078 MTERF2Q49AM1 385 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 CCDC178Q5BJE1 867 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 NOMO2Q5JPE7 1267 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 FAM160B1Q5W0V3 765 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 PLA2G4FQ68DD2 849 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 HEATR6Q6AI08 1181 aaKnown RBP4.1□□□□□ -1.75
USP46-205ENST00000504078 WWC2Q6AWC2 1192 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 SWSAP1Q6NVH7 229 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 EFCAB12Q6NXP0 572 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 IGF2-ASQ6U949 168 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 PRSS55Q6UWB4 352 aaPredicted RBP4.1□□□□□ -1.75
USP46-205ENST00000504078 GLB1LQ6UWU2 654 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 NFXL1Q6ZNB6 911 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.1□□□□□ -1.75
USP46-205ENST00000504078 GRASPQ7Z6J2 395 aaPredicted RBP4.1□□□□□ -1.75
USP46-205ENST00000504078 RAB44Q7Z6P3 723 aaPredicted RBP4.1□□□□□ -1.75
USP46-205ENST00000504078 CATIPQ7Z7H3 387 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 RALYLQ86SE5 291 aaKnown RBP4.1□□□□□ -1.75
USP46-205ENST00000504078 MICU3Q86XE3 530 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 SRBD1Q8N5C6 995 aaKnown RBP4.1□□□□□ -1.75
USP46-205ENST00000504078 GIMAP8Q8ND71 665 aaPredicted RBP4.1□□□□□ -1.75
USP46-205ENST00000504078 CTCFLQ8NI51 663 aaPredicted RBP4.1□□□□□ -1.75
USP46-205ENST00000504078 ATRIPQ8WXE1 791 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 ZNF707Q96C28 371 aaPredicted RBP4.1□□□□□ -1.75
USP46-205ENST00000504078 CDHR1Q96JP9 859 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 NLRP4Q96MN2 994 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 CEP63Q96MT8 703 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 MXRA8Q9BRK3 442 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 RTKNQ9BST9 563 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 HERC2P3Q9BVR0 1158 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 EMILIN2Q9BXX0 1053 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 MRPL9Q9BYD2 267 aaKnown RBP4.1□□□□□ -1.75
USP46-205ENST00000504078 BCO2Q9BYV7 579 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 ADAMTS10Q9H324 1103 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 SEMA4AQ9H3S1 761 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 CHMP4BQ9H444 224 aaKnown RBP4.1□□□□□ -1.75
USP46-205ENST00000504078 ELAC1Q9H777 363 aaKnown RBP4.1□□□□□ -1.75
USP46-205ENST00000504078 PSTPIP2Q9H939 334 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 WDR6Q9NNW5 1121 aaKnown RBP4.1□□□□□ -1.75
USP46-205ENST00000504078 LTB4R2Q9NPC1 389 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 SH2B1Q9NRF2 756 aaPredicted RBP4.1□□□□□ -1.75
USP46-205ENST00000504078 RXFP3Q9NSD7 469 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 HCFC1R1Q9NWW0 138 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 MARCH5Q9NX47 278 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 MAP3K20Q9NYL2 800 aaKnown RBP4.1□□□□□ -1.75
USP46-205ENST00000504078 SCHIP1Q9P0W5 487 aaPredicted RBP4.1□□□□□ -1.75
USP46-205ENST00000504078 IGSF9Q9P2J2 1179 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 GABBR1Q9UBS5 961 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 WNT16Q9UBV4 365 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 USP3Q9Y6I4 520 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 COL1A2P08123 1366 aa4.1□□□□□ -1.75
USP46-205ENST00000504078 RIF1Q5UIP0 2472 aaKnown RBP4.1□□□□□ -1.75
USP46-205ENST00000504078 TICRRQ7Z2Z1 1910 aa4.09□□□□□ -1.75
USP46-205ENST00000504078 OTOGLQ3ZCN5 2332 aa4.09□□□□□ -1.75
USP46-205ENST00000504078 GPR179Q6PRD1 2367 aa4.09□□□□□ -1.75
USP46-205ENST00000504078 A0A087WZ62 844 aa4.09□□□□□ -1.75
USP46-205ENST00000504078 KANSL1LA0AUZ9 987 aa4.09□□□□□ -1.75
USP46-205ENST00000504078 ERICH2A1L162 156 aa4.09□□□□□ -1.75
USP46-205ENST00000504078 SERTM1A2A2V5 107 aa4.09□□□□□ -1.75
USP46-205ENST00000504078 FAM170BA6NMN3 283 aa4.09□□□□□ -1.75
USP46-205ENST00000504078 CHURC1-FNTBB4DL54 471 aa4.09□□□□□ -1.75
USP46-205ENST00000504078 FAM86B1E9PN63 330 aa4.09□□□□□ -1.75
USP46-205ENST00000504078 PIK3CDO00329 1044 aa4.09□□□□□ -1.75
USP46-205ENST00000504078 ZNF862O60290 1169 aa4.09□□□□□ -1.75
USP46-205ENST00000504078 MED26O95402 600 aa4.09□□□□□ -1.75
USP46-205ENST00000504078 CYP21A2P08686 494 aa4.09□□□□□ -1.75
USP46-205ENST00000504078 FAM86B2P0C5J1 330 aa4.09□□□□□ -1.75
USP46-205ENST00000504078 CALM1P0DP23 149 aa4.09□□□□□ -1.75
USP46-205ENST00000504078 CALM2P0DP24 149 aa4.09□□□□□ -1.75
USP46-205ENST00000504078 CALM3P0DP25 149 aa4.09□□□□□ -1.75
USP46-205ENST00000504078 DARSP14868 501 aaKnown RBP4.09□□□□□ -1.75
USP46-205ENST00000504078 NOS2P35228 1153 aa4.09□□□□□ -1.75
USP46-205ENST00000504078 ZNF76P36508 570 aa4.09□□□□□ -1.75
USP46-205ENST00000504078 MLH1P40692 756 aa4.09□□□□□ -1.75
USP46-205ENST00000504078 OR1G1P47890 313 aa4.09□□□□□ -1.75
USP46-205ENST00000504078 FNTBP49356 437 aa4.09□□□□□ -1.75
USP46-205ENST00000504078 SCNN1GP51170 649 aa4.09□□□□□ -1.75
USP46-205ENST00000504078 NAPAP54920 295 aa4.09□□□□□ -1.75
USP46-205ENST00000504078 MFAP1P55081 439 aaKnown RBP4.09□□□□□ -1.75
USP46-205ENST00000504078 FAM189BP81408 668 aa4.09□□□□□ -1.75
USP46-205ENST00000504078 SATB1Q01826 763 aa4.09□□□□□ -1.75
USP46-205ENST00000504078 MTAPQ13126 283 aa4.09□□□□□ -1.75
USP46-205ENST00000504078 BMS1Q14692 1282 aaKnown RBP4.09□□□□□ -1.75
USP46-205ENST00000504078 NONOQ15233 471 aaKnown RBP eCLIP4.09□□□□□ -1.75
USP46-205ENST00000504078 TEAD4Q15561 434 aa4.09□□□□□ -1.75
USP46-205ENST00000504078 EML3Q32P44 896 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms