RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 C2orf71A6NGG8 1288 aa19.84■□□□□ 0.77
PDLIM7-209ENST00000503346 TADA2AO75478 443 aa19.84■□□□□ 0.77
PDLIM7-209ENST00000503346 KIF4AO95239 1232 aa19.84■□□□□ 0.77
PDLIM7-209ENST00000503346 NRIP1P48552 1158 aa19.84■□□□□ 0.77
PDLIM7-209ENST00000503346 ACOT2P49753 483 aa19.84■□□□□ 0.77
PDLIM7-209ENST00000503346 ZBTB6Q15916 424 aa19.84■□□□□ 0.77
PDLIM7-209ENST00000503346 DUSP6Q16828 381 aa19.84■□□□□ 0.77
PDLIM7-209ENST00000503346 UPP1Q16831 310 aa19.84■□□□□ 0.77
PDLIM7-209ENST00000503346 FUT10Q6P4F1 479 aa19.84■□□□□ 0.77
PDLIM7-209ENST00000503346 CRELD2Q6UXH1 353 aaPredicted RBP19.84■□□□□ 0.77
PDLIM7-209ENST00000503346 EFHBQ8N7U6 833 aa19.84■□□□□ 0.77
PDLIM7-209ENST00000503346 KIAA0895Q8NCT3 520 aa19.84■□□□□ 0.77
PDLIM7-209ENST00000503346 DDX27Q96GQ7 796 aaKnown RBP19.84■□□□□ 0.77
PDLIM7-209ENST00000503346 CBWD1Q9BRT8 395 aa19.84■□□□□ 0.77
PDLIM7-209ENST00000503346 TLE6Q9H808 572 aa19.84■□□□□ 0.77
PDLIM7-209ENST00000503346 UBE2ZQ9H832 354 aaPredicted RBP19.84■□□□□ 0.77
PDLIM7-209ENST00000503346 GOLGA2P5Q9HBQ8 144 aa19.84■□□□□ 0.77
PDLIM7-209ENST00000503346 TSHZ2Q9NRE2 1034 aa19.84■□□□□ 0.77
PDLIM7-209ENST00000503346 FSD2A1L4K1 749 aa19.83■□□□□ 0.77
PDLIM7-209ENST00000503346 LACTBL1A8MY62 500 aa19.83■□□□□ 0.77
PDLIM7-209ENST00000503346 KIAA0391O15091 583 aaKnown RBP19.83■□□□□ 0.77
PDLIM7-209ENST00000503346 LILRB3O75022 631 aa19.83■□□□□ 0.77
PDLIM7-209ENST00000503346 CXCL14O95715 111 aa19.83■□□□□ 0.77
PDLIM7-209ENST00000503346 LDHAP00338 332 aaKnown RBP19.83■□□□□ 0.77
PDLIM7-209ENST00000503346 GTF2F1P35269 517 aaKnown RBP eCLIP19.83■□□□□ 0.77
PDLIM7-209ENST00000503346 CLCNKBP51801 687 aa19.83■□□□□ 0.77
PDLIM7-209ENST00000503346 SNRPFP62306 86 aaKnown RBP19.83■□□□□ 0.77
PDLIM7-209ENST00000503346 STK4Q13043 487 aa19.83■□□□□ 0.77
PDLIM7-209ENST00000503346 PTPN14Q15678 1187 aa19.83■□□□□ 0.77
PDLIM7-209ENST00000503346 DCLRE1AQ6PJP8 1040 aa19.83■□□□□ 0.77
PDLIM7-209ENST00000503346 TAS1R1Q7RTX1 841 aa19.83■□□□□ 0.77
PDLIM7-209ENST00000503346 RBM23Q86U06 439 aaKnown RBP19.83■□□□□ 0.77
PDLIM7-209ENST00000503346 ATXN2LQ8WWM7 1075 aaKnown RBP19.83■□□□□ 0.77
PDLIM7-209ENST00000503346 C18orf25Q96B23 403 aaPredicted RBP19.83■□□□□ 0.77
PDLIM7-209ENST00000503346 TIGD1Q96MW7 591 aa19.83■□□□□ 0.77
PDLIM7-209ENST00000503346 IPO9Q96P70 1041 aaKnown RBP19.83■□□□□ 0.77
PDLIM7-209ENST00000503346 GPR62Q9BZJ7 368 aa19.83■□□□□ 0.77
PDLIM7-209ENST00000503346 ASB7Q9H672 318 aa19.83■□□□□ 0.77
PDLIM7-209ENST00000503346 CHST7Q9NS84 486 aa19.83■□□□□ 0.77
PDLIM7-209ENST00000503346 SF3B1O75533 1304 aaKnown RBP eCLIP19.82■□□□□ 0.762e-8■■■■■ 46.8
PDLIM7-209ENST00000503346 SPTBN5Q9NRC6 3674 aaKnown RBP19.82■□□□□ 0.76
PDLIM7-209ENST00000503346 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.82■□□□□ 0.76
PDLIM7-209ENST00000503346 PER2O15055 1255 aa19.82■□□□□ 0.76
PDLIM7-209ENST00000503346 TGFB1I1O43294 461 aa19.82■□□□□ 0.76
PDLIM7-209ENST00000503346 GADD45BO75293 160 aaPredicted RBP19.82■□□□□ 0.76
PDLIM7-209ENST00000503346 B3GAT3O94766 335 aa19.82■□□□□ 0.76
PDLIM7-209ENST00000503346 RHOBTB3O94955 611 aa19.82■□□□□ 0.76
PDLIM7-209ENST00000503346 CYP3A5P20815 502 aa19.82■□□□□ 0.76
PDLIM7-209ENST00000503346 RPL9P32969 192 aaKnown RBP19.82■□□□□ 0.76
PDLIM7-209ENST00000503346 ADAM15Q13444 863 aa19.82■□□□□ 0.76
PDLIM7-209ENST00000503346 KCNB1Q14721 858 aa19.82■□□□□ 0.76
PDLIM7-209ENST00000503346 ARMCX5Q6P1M9 558 aa19.82■□□□□ 0.76
PDLIM7-209ENST00000503346 CD300LGQ6UXG3 332 aa19.82■□□□□ 0.76
PDLIM7-209ENST00000503346 NELFCDQ8IXH7 590 aa19.82■□□□□ 0.76
PDLIM7-209ENST00000503346 GPR65Q8IYL9 337 aa19.82■□□□□ 0.76
PDLIM7-209ENST00000503346 AUTS2Q8WXX7 1259 aa19.82■□□□□ 0.76
PDLIM7-209ENST00000503346 CCDC47Q96A33 483 aaKnown RBP19.82■□□□□ 0.76
PDLIM7-209ENST00000503346 KIF12Q96FN5 646 aa19.82■□□□□ 0.76
PDLIM7-209ENST00000503346 IGFLR1Q9H665 355 aa19.82■□□□□ 0.76
PDLIM7-209ENST00000503346 UBQLN1Q9UMX0 589 aaKnown RBP19.82■□□□□ 0.76
PDLIM7-209ENST00000503346 SSX2IPQ9Y2D8 614 aa19.82■□□□□ 0.76
PDLIM7-209ENST00000503346 DERAQ9Y315 318 aa19.82■□□□□ 0.76
PDLIM7-209ENST00000503346 ATG2AQ2TAZ0 1938 aa19.82■□□□□ 0.76
PDLIM7-209ENST00000503346 TDRD15B5MCY1 1934 aaKnown RBP19.81■□□□□ 0.76
PDLIM7-209ENST00000503346 PODXLO00592 558 aa19.81■□□□□ 0.76
PDLIM7-209ENST00000503346 EXTL3O43909 919 aa19.81■□□□□ 0.76
PDLIM7-209ENST00000503346 URODP06132 367 aa19.81■□□□□ 0.76
PDLIM7-209ENST00000503346 DSG1Q02413 1049 aa19.81■□□□□ 0.76
PDLIM7-209ENST00000503346 SPAG1Q07617 926 aa19.81■□□□□ 0.76
PDLIM7-209ENST00000503346 ELAVL2Q12926 359 aaKnown RBP19.81■□□□□ 0.76
PDLIM7-209ENST00000503346 KCNC3Q14003 757 aa19.81■□□□□ 0.76
PDLIM7-209ENST00000503346 KNOP1Q1ED39 458 aaKnown RBP19.81■□□□□ 0.76
PDLIM7-209ENST00000503346 USP41Q3LFD5 358 aa19.81■□□□□ 0.76
PDLIM7-209ENST00000503346 KIAA0319Q5VV43 1072 aa19.81■□□□□ 0.76
PDLIM7-209ENST00000503346 BRSK2Q8IWQ3 736 aa19.81■□□□□ 0.76
PDLIM7-209ENST00000503346 ELOA2Q8IYF1 753 aaPredicted RBP19.81■□□□□ 0.76
PDLIM7-209ENST00000503346 HASPINQ8TF76 798 aa19.81■□□□□ 0.76
PDLIM7-209ENST00000503346 SAAL1Q96ER3 474 aa19.81■□□□□ 0.76
PDLIM7-209ENST00000503346 FAM213AQ9BRX8 229 aa19.81■□□□□ 0.76
PDLIM7-209ENST00000503346 MRPL17Q9NRX2 175 aaKnown RBP19.81■□□□□ 0.76
PDLIM7-209ENST00000503346 AGPAT3Q9NRZ7 376 aa19.81■□□□□ 0.76
PDLIM7-209ENST00000503346 CLDND1Q9NY35 253 aa19.81■□□□□ 0.76
PDLIM7-209ENST00000503346 CGNQ9P2M7 1197 aaKnown RBP19.81■□□□□ 0.76
PDLIM7-209ENST00000503346 TUBGCP4Q9UGJ1 667 aa19.81■□□□□ 0.76
PDLIM7-209ENST00000503346 MYO7AQ13402 2215 aa19.8■□□□□ 0.76
PDLIM7-209ENST00000503346 LINC01565O15544 149 aa19.8■□□□□ 0.76
PDLIM7-209ENST00000503346 XPOTO43592 962 aaKnown RBP19.8■□□□□ 0.76
PDLIM7-209ENST00000503346 CLASP2O75122 1294 aaKnown RBP19.8■□□□□ 0.76
PDLIM7-209ENST00000503346 LRPAP1P30533 357 aa19.8■□□□□ 0.76
PDLIM7-209ENST00000503346 LTBRP36941 435 aa19.8■□□□□ 0.76
PDLIM7-209ENST00000503346 GLUD2P49448 558 aa19.8■□□□□ 0.76
PDLIM7-209ENST00000503346 MRPS5P82675 430 aaKnown RBP19.8■□□□□ 0.76
PDLIM7-209ENST00000503346 TFF2Q03403 129 aa19.8■□□□□ 0.76
PDLIM7-209ENST00000503346 AAK1Q2M2I8 961 aa19.8■□□□□ 0.76
PDLIM7-209ENST00000503346 JADE1Q6IE81 842 aa19.8■□□□□ 0.76
PDLIM7-209ENST00000503346 HS2ST1Q7LGA3 356 aa19.8■□□□□ 0.76
PDLIM7-209ENST00000503346 GPD1LQ8N335 351 aa19.8■□□□□ 0.76
PDLIM7-209ENST00000503346 C3orf58Q8NDZ4 430 aa19.8■□□□□ 0.76
PDLIM7-209ENST00000503346 ZSWIM2Q8NEG5 633 aa19.8■□□□□ 0.76
PDLIM7-209ENST00000503346 FAM212AQ96EL1 285 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms