RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 OSGEPQ9NPF4 335 aa12.43□□□□□ -0.42
USP46-204ENST00000503060 TRIM64CA6NLI5 447 aa12.42□□□□□ -0.42
USP46-204ENST00000503060 CYP26A1O43174 497 aa12.42□□□□□ -0.42
USP46-204ENST00000503060 LGR5O75473 907 aa12.42□□□□□ -0.42
USP46-204ENST00000503060 ABL2P42684 1182 aa12.42□□□□□ -0.42
USP46-204ENST00000503060 NLRP11P59045 1033 aaKnown RBP12.42□□□□□ -0.42
USP46-204ENST00000503060 CLDN10P78369 228 aa12.42□□□□□ -0.42
USP46-204ENST00000503060 SNAPC2Q13487 334 aa12.42□□□□□ -0.42
USP46-204ENST00000503060 CAPSQ13938 189 aa12.42□□□□□ -0.42
USP46-204ENST00000503060 GLE1Q53GS7 698 aaKnown RBP12.42□□□□□ -0.42
USP46-204ENST00000503060 C8orf74Q6P047 294 aa12.42□□□□□ -0.42
USP46-204ENST00000503060 NT5DC3Q86UY8 548 aa12.42□□□□□ -0.42
USP46-204ENST00000503060 USP38Q8NB14 1042 aa12.42□□□□□ -0.42
USP46-204ENST00000503060 ZNF516Q92618 1163 aa12.42□□□□□ -0.42
USP46-204ENST00000503060 ZBTB45Q96K62 511 aaPredicted RBP12.42□□□□□ -0.42
USP46-204ENST00000503060 PCDHB18PQ96TA0 734 aa12.42□□□□□ -0.42
USP46-204ENST00000503060 TARS2Q9BW92 718 aaKnown RBP12.42□□□□□ -0.42
USP46-204ENST00000503060 HAPLN2Q9GZV7 340 aa12.42□□□□□ -0.42
USP46-204ENST00000503060 ISCUQ9H1K1 167 aa12.42□□□□□ -0.42
USP46-204ENST00000503060 TAF1DQ9H5J8 278 aaPredicted RBP12.42□□□□□ -0.42
USP46-204ENST00000503060 ADCY3O60266 1144 aa12.42□□□□□ -0.42
USP46-204ENST00000503060 BUB1BO60566 1050 aaPredicted RBP12.42□□□□□ -0.42
USP46-204ENST00000503060 ZC3H11AO75152 810 aaKnown RBP eCLIP12.42□□□□□ -0.42
USP46-204ENST00000503060 MTA2O94776 668 aa12.42□□□□□ -0.42
USP46-204ENST00000503060 FTLP02792 175 aaPredicted RBP12.42□□□□□ -0.42
USP46-204ENST00000503060 MYBL2P10244 700 aa12.42□□□□□ -0.42
USP46-204ENST00000503060 ERVK-9P63128 1117 aa12.42□□□□□ -0.42
USP46-204ENST00000503060 MRPS25P82663 173 aaKnown RBP12.42□□□□□ -0.42
USP46-204ENST00000503060 TTC39BQ5VTQ0 682 aaPredicted RBP12.42□□□□□ -0.42
USP46-204ENST00000503060 CRELD2Q6UXH1 353 aaPredicted RBP12.42□□□□□ -0.42
USP46-204ENST00000503060 UBE2Q1Q7Z7E8 422 aa12.42□□□□□ -0.42
USP46-204ENST00000503060 LMNTD2Q8IXW0 634 aa12.42□□□□□ -0.42
USP46-204ENST00000503060 SHCBP1Q8NEM2 672 aa12.42□□□□□ -0.42
USP46-204ENST00000503060 GLG1Q92896 1179 aa12.42□□□□□ -0.42
USP46-204ENST00000503060 TATDN2Q93075 761 aa12.42□□□□□ -0.42
USP46-204ENST00000503060 FAM84AQ96KN4 292 aa12.42□□□□□ -0.42
USP46-204ENST00000503060 AGAP3Q96P47 875 aa12.42□□□□□ -0.42
USP46-204ENST00000503060 SELENOOQ9BVL4 669 aa12.42□□□□□ -0.42
USP46-204ENST00000503060 AMFRQ9UKV5 643 aa12.42□□□□□ -0.42
USP46-204ENST00000503060 ZNF232Q9UNY5 417 aa12.42□□□□□ -0.42
USP46-204ENST00000503060 UTRNP46939 3433 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 GLTPD2A6NH11 291 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 NOP56O00567 594 aaKnown RBP12.41□□□□□ -0.42
USP46-204ENST00000503060 RTN2O75298 545 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 EDN1P05305 212 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 OAS2P29728 719 aaKnown RBP12.41□□□□□ -0.42
USP46-204ENST00000503060 ACOT2P49753 483 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 WNT7BP56706 349 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 SLC7A5Q01650 507 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 DRP2Q13474 957 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 HSDL1Q3SXM5 330 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 ZNF394Q53GI3 561 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 CCDC62Q6P9F0 684 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 SLC47A2Q86VL8 602 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 FBXO16Q8IX29 292 aaPredicted RBP12.41□□□□□ -0.42
USP46-204ENST00000503060 GSPT2Q8IYD1 628 aaKnown RBP12.41□□□□□ -0.42
USP46-204ENST00000503060 METTL13Q8N6R0 699 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 ACTRT1Q8TDG2 376 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 DDX27Q96GQ7 796 aaKnown RBP12.41□□□□□ -0.42
USP46-204ENST00000503060 HES6Q96HZ4 224 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 FNBP1Q96RU3 617 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 STIM2Q9P246 746 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 A0A0B4J269 797 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 FAM170AA1A519 330 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 CEP104O60308 925 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 LDHAP00338 332 aaKnown RBP12.41□□□□□ -0.42
USP46-204ENST00000503060 GZMAP12544 262 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 MARK3P27448 753 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 HADHBP55084 474 aaKnown RBP12.41□□□□□ -0.42
USP46-204ENST00000503060 RNASE9P60153 205 aaKnown RBP12.41□□□□□ -0.42
USP46-204ENST00000503060 GCNT1Q02742 428 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 COL19A1Q14993 1142 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 TCEAL1Q15170 157 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 TSNAXIP1Q2TAA8 658 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 IER5Q5VY09 327 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 LMBRD2Q68DH5 695 aaPredicted RBP12.41□□□□□ -0.42
USP46-204ENST00000503060 ENOSF1Q7L5Y1 443 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 PLPPR4Q7Z2D5 763 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 TRIM50Q86XT4 487 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 RHOT2Q8IXI1 618 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 ATP8B4Q8TF62 1192 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 PRPF31Q8WWY3 499 aaKnown RBP12.41□□□□□ -0.42
USP46-204ENST00000503060 ELMO3Q96BJ8 720 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 SLC10A4Q96EP9 437 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 PI4K2AQ9BTU6 479 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 MSTO1Q9BUK6 570 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 PDE11AQ9HCR9 933 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 ACP6Q9NPH0 428 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 TMEM59LQ9UK28 342 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 RABL2BQ9UNT1 228 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 COG5Q9UP83 839 aa12.41□□□□□ -0.42
USP46-204ENST00000503060 C4BPAP04003 597 aaKnown RBP12.4□□□□□ -0.42
USP46-204ENST00000503060 SETSIPP0DME0 302 aa12.4□□□□□ -0.42
USP46-204ENST00000503060 CYP11B1P15538 503 aa12.4□□□□□ -0.42
USP46-204ENST00000503060 TNNI1P19237 187 aa12.4□□□□□ -0.42
USP46-204ENST00000503060 TNNT3P45378 269 aaPredicted RBP12.4□□□□□ -0.42
USP46-204ENST00000503060 TNNC1P63316 161 aa12.4□□□□□ -0.42
USP46-204ENST00000503060 FMO1Q01740 532 aa12.4□□□□□ -0.42
USP46-204ENST00000503060 ZACNQ401N2 412 aa12.4□□□□□ -0.42
USP46-204ENST00000503060 AENQ8WTP8 325 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms