RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 ZNF185O15231 689 aa7.9□□□□□ -1.14
PDGFC-203ENST00000502773 ZEB2O60315 1214 aa7.9□□□□□ -1.14
PDGFC-203ENST00000502773 KCNA3P22001 575 aa7.9□□□□□ -1.14
PDGFC-203ENST00000502773 C1QBPQ07021 282 aaKnown RBP7.9□□□□□ -1.14
PDGFC-203ENST00000502773 PTP4A2Q12974 167 aa7.9□□□□□ -1.14
PDGFC-203ENST00000502773 MESDQ14696 234 aa7.9□□□□□ -1.14
PDGFC-203ENST00000502773 USP50Q70EL3 339 aaPredicted RBP7.9□□□□□ -1.14
PDGFC-203ENST00000502773 PSMB7Q99436 277 aa7.9□□□□□ -1.14
PDGFC-203ENST00000502773 FAM213AQ9BRX8 229 aa7.9□□□□□ -1.14
PDGFC-203ENST00000502773 MAFBQ9Y5Q3 323 aaPredicted RBP7.9□□□□□ -1.14
PDGFC-203ENST00000502773 ARFGEF1Q9Y6D6 1849 aa7.9□□□□□ -1.15
PDGFC-203ENST00000502773 LRRN2O75325 713 aa7.9□□□□□ -1.15
PDGFC-203ENST00000502773 TOM1L1O75674 476 aa7.9□□□□□ -1.15
PDGFC-203ENST00000502773 RPLP2P05387 115 aaKnown RBP7.9□□□□□ -1.15
PDGFC-203ENST00000502773 CYP11B1P15538 503 aa7.9□□□□□ -1.15
PDGFC-203ENST00000502773 ATICP31939 592 aa7.9□□□□□ -1.15
PDGFC-203ENST00000502773 GGCXP38435 758 aa7.9□□□□□ -1.15
PDGFC-203ENST00000502773 SLC30A10Q6XR72 485 aa7.9□□□□□ -1.15
PDGFC-203ENST00000502773 TAX1BP1Q86VP1 789 aa7.9□□□□□ -1.15
PDGFC-203ENST00000502773 RCOR2Q8IZ40 523 aa7.9□□□□□ -1.15
PDGFC-203ENST00000502773 ATP6V1G3Q96LB4 118 aa7.9□□□□□ -1.15
PDGFC-203ENST00000502773 ERP44Q9BS26 406 aa7.9□□□□□ -1.15
PDGFC-203ENST00000502773 NUP85Q9BW27 656 aa7.9□□□□□ -1.15
PDGFC-203ENST00000502773 TRIM4Q9C037 500 aa7.9□□□□□ -1.15
PDGFC-203ENST00000502773 GGA3Q9NZ52 723 aa7.9□□□□□ -1.15
PDGFC-203ENST00000502773 ARHGAP28Q9P2N2 729 aa7.9□□□□□ -1.15
PDGFC-203ENST00000502773 PGAP2Q9UHJ9 254 aa7.9□□□□□ -1.15
PDGFC-203ENST00000502773 NFU1Q9UMS0 254 aa7.9□□□□□ -1.15
PDGFC-203ENST00000502773 AFG3L2Q9Y4W6 797 aa7.9□□□□□ -1.15
PDGFC-203ENST00000502773 ENO4A6NNW6 628 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 BUB1BO60566 1050 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-203ENST00000502773 TJP3O95049 919 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 KCNA2P16389 499 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 MCL1Q07820 350 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 PPIL2Q13356 520 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 BYSLQ13895 437 aaKnown RBP7.89□□□□□ -1.15
PDGFC-203ENST00000502773 PIGHQ14442 188 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-203ENST00000502773 LRRC23Q53EV4 343 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-203ENST00000502773 KIAA1755Q5JYT7 1200 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 CEP85LQ5SZL2 805 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 DCUN1D2Q6PH85 259 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 SEPT14Q6ZU15 432 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 LRRN4CLQ8ND94 238 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 CCDC114Q96M63 670 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 TTC25Q96NG3 672 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 RPF1Q9H9Y2 349 aaKnown RBP7.89□□□□□ -1.15
PDGFC-203ENST00000502773 A1CFQ9NQ94 594 aaKnown RBP7.89□□□□□ -1.15
PDGFC-203ENST00000502773 STYXL1Q9Y6J8 313 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 IRF6O14896 467 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 OGTO15294 1046 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 STRNO43815 780 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 ATG7O95352 703 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 HOXD13P35453 343 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 GCLCP48506 637 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-203ENST00000502773 ALDH5A1P51649 535 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-203ENST00000502773 SKOR1P84550 965 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 ACAP1Q15027 740 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 SAMD7Q7Z3H4 446 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 ATL2Q8NHH9 583 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 MMP19Q99542 508 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 CBWD1Q9BRT8 395 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 SYNCQ9H7C4 482 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 CYP3A43Q9HB55 503 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 PCYOX1Q9UHG3 505 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 TMEM59LQ9UK28 342 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 PCDHA3Q9Y5H8 950 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 ZC3H4Q9UPT8 1303 aaKnown RBP7.89□□□□□ -1.15
PDGFC-203ENST00000502773 PSME4Q14997 1843 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 NCK2O43639 380 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 ADCY3O60266 1144 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 JAG1P78504 1218 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 SNAPC2Q13487 334 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 CLEC16AQ2KHT3 1053 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 LRRC38Q5VT99 294 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 PHACTR1Q9C0D0 580 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 SPATC1LQ9H0A9 340 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 PRDM16Q9HAZ2 1276 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 SPON1Q9HCB6 807 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 ZCCHC17Q9NP64 241 aaKnown RBP7.89□□□□□ -1.15
PDGFC-203ENST00000502773 ADAM22Q9P0K1 906 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 GGA2Q9UJY4 613 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 ZMYM2Q9UBW7 1377 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 TMEM110-MUSTN1A8MSY1 372 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 MAFO75444 373 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-203ENST00000502773 ZBTB7AO95365 584 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 KRT7P08729 469 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 E2F5Q15329 346 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 CBWD6Q4V339 395 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 SGO2Q562F6 1265 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 CBWD3Q5JTY5 395 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 CBWD5Q5RIA9 395 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 C4orf22Q6V702 233 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 PPP1R21Q6ZMI0 780 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 KDM7AQ6ZMT4 941 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 SV2AQ7L0J3 742 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 CCDC50Q8IVM0 306 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 MAP7D3Q8IWC1 876 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 HACE1Q8IYU2 909 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 ATP8B4Q8TF62 1192 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 FIZ1Q96SL8 496 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms