RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 SEMA5AQ13591 1074 aa7.88□□□□□ -1.15
NEDD4-203ENST00000502612 TBC1D10BQ4KMP7 808 aaPredicted RBP7.88□□□□□ -1.15
NEDD4-203ENST00000502612 UBE3BQ7Z3V4 1068 aa7.88□□□□□ -1.15
NEDD4-203ENST00000502612 PARD3BQ8TEW8 1205 aa7.88□□□□□ -1.15
NEDD4-203ENST00000502612 C22orf23Q9BZE7 217 aa7.88□□□□□ -1.15
NEDD4-203ENST00000502612 USP25Q9UHP3 1055 aa7.88□□□□□ -1.15
NEDD4-203ENST00000502612 FEZ2Q9UHY8 353 aaPredicted RBP7.88□□□□□ -1.15
NEDD4-203ENST00000502612 KIAA0391O15091 583 aaKnown RBP7.87□□□□□ -1.15
NEDD4-203ENST00000502612 PRICKLE3O43900 615 aaPredicted RBP7.87□□□□□ -1.15
NEDD4-203ENST00000502612 PQBP1O60828 265 aaKnown RBP7.87□□□□□ -1.15
NEDD4-203ENST00000502612 NBPF7P0C2Y1 421 aaPredicted RBP7.87□□□□□ -1.15
NEDD4-203ENST00000502612 PEX2P28328 305 aa7.87□□□□□ -1.15
NEDD4-203ENST00000502612 PRDX5P30044 214 aa7.87□□□□□ -1.15
NEDD4-203ENST00000502612 FAM193AP78312 1265 aa7.87□□□□□ -1.15
NEDD4-203ENST00000502612 FGL2Q14314 439 aa7.87□□□□□ -1.15
NEDD4-203ENST00000502612 GRM7Q14831 915 aa7.87□□□□□ -1.15
NEDD4-203ENST00000502612 FKBP15Q5T1M5 1219 aa7.87□□□□□ -1.15
NEDD4-203ENST00000502612 SLFN13Q68D06 897 aa7.87□□□□□ -1.15
NEDD4-203ENST00000502612 OTUD7BQ6GQQ9 843 aa7.87□□□□□ -1.15
NEDD4-203ENST00000502612 TCTN3Q6NUS6 607 aa7.87□□□□□ -1.15
NEDD4-203ENST00000502612 ZNF529Q6P280 563 aa7.87□□□□□ -1.15
NEDD4-203ENST00000502612 DARS2Q6PI48 645 aaKnown RBP7.87□□□□□ -1.15
NEDD4-203ENST00000502612 FAM90A1Q86YD7 464 aa7.87□□□□□ -1.15
NEDD4-203ENST00000502612 FUKQ8N0W3 1084 aa7.87□□□□□ -1.15
NEDD4-203ENST00000502612 RNF169Q8NCN4 708 aa7.87□□□□□ -1.15
NEDD4-203ENST00000502612 GIMAP8Q8ND71 665 aaPredicted RBP7.87□□□□□ -1.15
NEDD4-203ENST00000502612 CPEB1Q9BZB8 566 aaKnown RBP7.87□□□□□ -1.15
NEDD4-203ENST00000502612 SLAMF7Q9NQ25 335 aa7.87□□□□□ -1.15
NEDD4-203ENST00000502612 PCDHA6Q9UN73 950 aa7.87□□□□□ -1.15
NEDD4-203ENST00000502612 SH3BP1Q9Y3L3 701 aa7.87□□□□□ -1.15
NEDD4-203ENST00000502612 FOXS1O43638 330 aa7.86□□□□□ -1.15
NEDD4-203ENST00000502612 KITP10721 976 aa7.86□□□□□ -1.15
NEDD4-203ENST00000502612 MSX2P35548 267 aaPredicted RBP7.86□□□□□ -1.15
NEDD4-203ENST00000502612 PHKA1P46020 1223 aa7.86□□□□□ -1.15
NEDD4-203ENST00000502612 FOXL1Q12952 345 aa7.86□□□□□ -1.15
NEDD4-203ENST00000502612 SURF1Q15526 300 aa7.86□□□□□ -1.15
NEDD4-203ENST00000502612 SEM1Q6ZVN7 128 aa7.86□□□□□ -1.15
NEDD4-203ENST00000502612 LIMS2Q7Z4I7 341 aa7.86□□□□□ -1.15
NEDD4-203ENST00000502612 FRMD5Q7Z6J6 570 aa7.86□□□□□ -1.15
NEDD4-203ENST00000502612 ELOA2Q8IYF1 753 aaPredicted RBP7.86□□□□□ -1.15
NEDD4-203ENST00000502612 SVIPQ8NHG7 77 aa7.86□□□□□ -1.15
NEDD4-203ENST00000502612 LRTOMTQ8WZ04 291 aa7.86□□□□□ -1.15
NEDD4-203ENST00000502612 PMM1Q92871 262 aa7.86□□□□□ -1.15
NEDD4-203ENST00000502612 NAA15Q9BXJ9 866 aaKnown RBP7.86□□□□□ -1.15
NEDD4-203ENST00000502612 MRPL46Q9H2W6 279 aaKnown RBP7.86□□□□□ -1.15
NEDD4-203ENST00000502612 NELFAQ9H3P2 528 aa7.86□□□□□ -1.15
NEDD4-203ENST00000502612 ZCCHC4Q9H5U6 513 aa7.86□□□□□ -1.15
NEDD4-203ENST00000502612 FBXO34Q9NWN3 711 aa7.86□□□□□ -1.15
NEDD4-203ENST00000502612 PLA2G3Q9NZ20 509 aa7.86□□□□□ -1.15
NEDD4-203ENST00000502612 SLC45A2Q9UMX9 530 aa7.86□□□□□ -1.15
NEDD4-203ENST00000502612 GOLIM4O00461 696 aa7.85□□□□□ -1.15
NEDD4-203ENST00000502612 GPR42O15529 346 aa7.85□□□□□ -1.15
NEDD4-203ENST00000502612 TEX33O43247 280 aa7.85□□□□□ -1.15
NEDD4-203ENST00000502612 ARIH2O95376 493 aa7.85□□□□□ -1.15
NEDD4-203ENST00000502612 NPR1P16066 1061 aa7.85□□□□□ -1.15
NEDD4-203ENST00000502612 CREMQ03060 361 aa7.85□□□□□ -1.15
NEDD4-203ENST00000502612 PTH1RQ03431 593 aa7.85□□□□□ -1.15
NEDD4-203ENST00000502612 FAM167AQ96KS9 214 aa7.85□□□□□ -1.15
NEDD4-203ENST00000502612 MPHOSPH6Q99547 160 aaKnown RBP7.85□□□□□ -1.15
NEDD4-203ENST00000502612 NDC1Q9BTX1 674 aa7.85□□□□□ -1.15
NEDD4-203ENST00000502612 WDCPQ9H6R7 721 aa7.85□□□□□ -1.15
NEDD4-203ENST00000502612 SCRIBQ14160 1630 aa7.85□□□□□ -1.15
NEDD4-203ENST00000502612 USP19O94966 1318 aa7.84□□□□□ -1.15
NEDD4-203ENST00000502612 ANO9A1A5B4 782 aa7.84□□□□□ -1.15
NEDD4-203ENST00000502612 NPEPPSL1A6NEC2 478 aa7.84□□□□□ -1.15
NEDD4-203ENST00000502612 PHKG2P15735 406 aa7.84□□□□□ -1.15
NEDD4-203ENST00000502612 SLC6A2P23975 617 aa7.84□□□□□ -1.15
NEDD4-203ENST00000502612 RPS19P39019 145 aaKnown RBP7.84□□□□□ -1.15
NEDD4-203ENST00000502612 CACNB3P54284 484 aa7.84□□□□□ -1.15
NEDD4-203ENST00000502612 EXOSC9Q06265 439 aaKnown RBP7.84□□□□□ -1.15
NEDD4-203ENST00000502612 ELAVL1Q15717 326 aaKnown RBP7.84□□□□□ -1.15
NEDD4-203ENST00000502612 BMT2Q1RMZ1 405 aa7.84□□□□□ -1.15
NEDD4-203ENST00000502612 PABPC1LQ4VXU2 614 aaKnown RBP7.84□□□□□ -1.15
NEDD4-203ENST00000502612 DACT2Q5SW24 774 aa7.84□□□□□ -1.15
NEDD4-203ENST00000502612 MB21D1Q8N884 522 aa7.84□□□□□ -1.15
NEDD4-203ENST00000502612 IL31RAQ8NI17 732 aa7.84□□□□□ -1.15
NEDD4-203ENST00000502612 TNPO1Q92973 898 aaKnown RBP7.84□□□□□ -1.15
NEDD4-203ENST00000502612 MTFMTQ96DP5 389 aaKnown RBP7.84□□□□□ -1.15
NEDD4-203ENST00000502612 BORCS6Q96GS4 357 aa7.84□□□□□ -1.15
NEDD4-203ENST00000502612 CPPED1Q9BRF8 314 aaPredicted RBP7.84□□□□□ -1.15
NEDD4-203ENST00000502612 ZFR2Q9UPR6 939 aaKnown RBP7.84□□□□□ -1.15
NEDD4-203ENST00000502612 PRSS29PA6NIE9 313 aa7.83□□□□□ -1.16
NEDD4-203ENST00000502612 TBKBP1A7MCY6 615 aa7.83□□□□□ -1.16
NEDD4-203ENST00000502612 B5MCH6 92 aa7.83□□□□□ -1.16
NEDD4-203ENST00000502612 MATN4O95460 622 aa7.83□□□□□ -1.16
NEDD4-203ENST00000502612 PLATP00750 562 aa7.83□□□□□ -1.16
NEDD4-203ENST00000502612 SNRPA1P09661 255 aaKnown RBP7.83□□□□□ -1.16
NEDD4-203ENST00000502612 HDCP19113 662 aa7.83□□□□□ -1.16
NEDD4-203ENST00000502612 CLRN1P58418 232 aa7.83□□□□□ -1.16
NEDD4-203ENST00000502612 GPSM2P81274 684 aa7.83□□□□□ -1.16
NEDD4-203ENST00000502612 PICALMQ13492 652 aa7.83□□□□□ -1.16
NEDD4-203ENST00000502612 CCDC93Q567U6 631 aa7.83□□□□□ -1.16
NEDD4-203ENST00000502612 KHDC1LQ5JSQ8 128 aa7.83□□□□□ -1.16
NEDD4-203ENST00000502612 UBXN11Q5T124 520 aa7.83□□□□□ -1.16
NEDD4-203ENST00000502612 MRGPRX1Q96LB2 322 aa7.83□□□□□ -1.16
NEDD4-203ENST00000502612 SPON1Q9HCB6 807 aa7.83□□□□□ -1.16
NEDD4-203ENST00000502612 PARD6AQ9NPB6 346 aa7.83□□□□□ -1.16
NEDD4-203ENST00000502612 PHTF1Q9UMS5 762 aa7.83□□□□□ -1.16
NEDD4-203ENST00000502612 A0A1W2PPL8 197 aa7.82□□□□□ -1.16
NEDD4-203ENST00000502612 PJA2O43164 708 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms