RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 CYFIP1Q7L576 1253 aa17.72■□□□□ 0.43
VCAN-204ENST00000502527 MYCBPAPQ8TBZ2 947 aa17.72■□□□□ 0.43
VCAN-204ENST00000502527 EPB41L4BQ9H329 900 aa17.72■□□□□ 0.43
VCAN-204ENST00000502527 LRRC19Q9H756 370 aa17.72■□□□□ 0.43
VCAN-204ENST00000502527 ZNF302Q9NR11 478 aa17.72■□□□□ 0.43
VCAN-204ENST00000502527 MAFBQ9Y5Q3 323 aaPredicted RBP17.72■□□□□ 0.43
VCAN-204ENST00000502527 PHIPQ8WWQ0 1821 aa17.72■□□□□ 0.43
VCAN-204ENST00000502527 ATXN2Q99700 1313 aaKnown RBP17.72■□□□□ 0.43
VCAN-204ENST00000502527 E7EVH7 732 aa17.71■□□□□ 0.43
VCAN-204ENST00000502527 FZD9O00144 591 aa17.71■□□□□ 0.43
VCAN-204ENST00000502527 FSCN2O14926 492 aa17.71■□□□□ 0.43
VCAN-204ENST00000502527 HLA-DRAP01903 254 aa17.71■□□□□ 0.43
VCAN-204ENST00000502527 OATP04181 439 aa17.71■□□□□ 0.43
VCAN-204ENST00000502527 PIK3CAP42336 1068 aa17.71■□□□□ 0.43
VCAN-204ENST00000502527 SLC1A1P43005 524 aa17.71■□□□□ 0.43
VCAN-204ENST00000502527 SEC24CP53992 1094 aa17.71■□□□□ 0.43
VCAN-204ENST00000502527 SLMAPQ14BN4 828 aa17.71■□□□□ 0.43
VCAN-204ENST00000502527 STXBP2Q15833 593 aa17.71■□□□□ 0.43
VCAN-204ENST00000502527 ANGEL2Q5VTE6 544 aaKnown RBP17.71■□□□□ 0.43
VCAN-204ENST00000502527 PRAMEF18Q5VWM3 479 aa17.71■□□□□ 0.43
VCAN-204ENST00000502527 CROCCP2Q86T23 111 aa17.71■□□□□ 0.43
VCAN-204ENST00000502527 C3orf20Q8ND61 904 aa17.71■□□□□ 0.43
VCAN-204ENST00000502527 TLCD1Q96CP7 247 aa17.71■□□□□ 0.43
VCAN-204ENST00000502527 PORCNQ9H237 461 aa17.71■□□□□ 0.43
VCAN-204ENST00000502527 CNOT10Q9H9A5 744 aaKnown RBP17.71■□□□□ 0.43
VCAN-204ENST00000502527 MYPNQ86TC9 1320 aa17.71■□□□□ 0.43
VCAN-204ENST00000502527 ECEL1O95672 775 aa17.71■□□□□ 0.43
VCAN-204ENST00000502527 PIGRP01833 764 aa17.71■□□□□ 0.43
VCAN-204ENST00000502527 C4BPAP04003 597 aaKnown RBP17.71■□□□□ 0.43
VCAN-204ENST00000502527 ICAM3P32942 547 aa17.71■□□□□ 0.43
VCAN-204ENST00000502527 NAMPTP43490 491 aa17.71■□□□□ 0.43
VCAN-204ENST00000502527 NSFP46459 744 aaKnown RBP17.71■□□□□ 0.43
VCAN-204ENST00000502527 BYSLQ13895 437 aaKnown RBP17.71■□□□□ 0.43
VCAN-204ENST00000502527 DNERQ8NFT8 737 aa17.71■□□□□ 0.43
VCAN-204ENST00000502527 DEPTORQ8TB45 409 aa17.71■□□□□ 0.43
VCAN-204ENST00000502527 MAIP1Q8WWC4 291 aa17.71■□□□□ 0.43
VCAN-204ENST00000502527 TMEM143Q96AN5 459 aa17.71■□□□□ 0.43
VCAN-204ENST00000502527 RGS17Q9UGC6 210 aaPredicted RBP17.71■□□□□ 0.43
VCAN-204ENST00000502527 RLFQ13129 1914 aa17.7■□□□□ 0.42
VCAN-204ENST00000502527 ARID2Q68CP9 1835 aa17.7■□□□□ 0.42
VCAN-204ENST00000502527 GMNCA6NCL1 334 aa17.7■□□□□ 0.42
VCAN-204ENST00000502527 K7ERI5 159 aa17.7■□□□□ 0.42
VCAN-204ENST00000502527 CLDN3O15551 220 aa17.7■□□□□ 0.42
VCAN-204ENST00000502527 ATG7O95352 703 aa17.7■□□□□ 0.42
VCAN-204ENST00000502527 LDHAP00338 332 aaKnown RBP17.7■□□□□ 0.42
VCAN-204ENST00000502527 NLRP11P59045 1033 aaKnown RBP17.7■□□□□ 0.42
VCAN-204ENST00000502527 SP2Q02086 613 aa17.7■□□□□ 0.42
VCAN-204ENST00000502527 TDRD10Q5VZ19 366 aaKnown RBP17.7■□□□□ 0.42
VCAN-204ENST00000502527 LMBRD2Q68DH5 695 aaPredicted RBP17.7■□□□□ 0.42
VCAN-204ENST00000502527 CPA5Q8WXQ8 436 aa17.7■□□□□ 0.42
VCAN-204ENST00000502527 SLCO2A1Q92959 643 aa17.7■□□□□ 0.42
VCAN-204ENST00000502527 ART4Q93070 314 aa17.7■□□□□ 0.42
VCAN-204ENST00000502527 RNF25Q96BH1 459 aaPredicted RBP17.7■□□□□ 0.42
VCAN-204ENST00000502527 KLRG1Q96E93 195 aa17.7■□□□□ 0.42
VCAN-204ENST00000502527 PGM2Q96G03 612 aa17.7■□□□□ 0.42
VCAN-204ENST00000502527 DHX33Q9H6R0 707 aaKnown RBP17.7■□□□□ 0.42
VCAN-204ENST00000502527 PPANQ9NQ55 473 aaKnown RBP17.7■□□□□ 0.42
VCAN-204ENST00000502527 PTPN22Q9Y2R2 807 aa17.7■□□□□ 0.42
VCAN-204ENST00000502527 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.7■□□□□ 0.42
VCAN-204ENST00000502527 LTBP3Q9NS15 1303 aa17.7■□□□□ 0.42
VCAN-204ENST00000502527 SPDYE16A6NNV3 312 aaPredicted RBP17.7■□□□□ 0.42
VCAN-204ENST00000502527 TRAPPC3O43617 180 aa17.7■□□□□ 0.42
VCAN-204ENST00000502527 KIAA0754O94854 1291 aa17.7■□□□□ 0.42
VCAN-204ENST00000502527 CALCAP01258 141 aa17.7■□□□□ 0.42
VCAN-204ENST00000502527 CYP1A1P04798 512 aaPredicted RBP17.7■□□□□ 0.42
VCAN-204ENST00000502527 PAEPP09466 180 aa17.7■□□□□ 0.42
VCAN-204ENST00000502527 ATP4AP20648 1035 aa17.7■□□□□ 0.42
VCAN-204ENST00000502527 ACOT2P49753 483 aa17.7■□□□□ 0.42
VCAN-204ENST00000502527 CENPCQ03188 943 aa17.7■□□□□ 0.42
VCAN-204ENST00000502527 PPP1R7Q15435 360 aa17.7■□□□□ 0.42
VCAN-204ENST00000502527 TADA2BQ86TJ2 420 aa17.7■□□□□ 0.42
VCAN-204ENST00000502527 CHST13Q8NET6 341 aa17.7■□□□□ 0.42
VCAN-204ENST00000502527 ASAP3Q8TDY4 903 aa17.7■□□□□ 0.42
VCAN-204ENST00000502527 SLC7A3Q8WY07 619 aa17.7■□□□□ 0.42
VCAN-204ENST00000502527 FAM84AQ96KN4 292 aa17.7■□□□□ 0.42
VCAN-204ENST00000502527 RBAKQ9NYW8 714 aaPredicted RBP17.7■□□□□ 0.42
VCAN-204ENST00000502527 GGA2Q9UJY4 613 aa17.7■□□□□ 0.42
VCAN-204ENST00000502527 FZD1Q9UP38 647 aa17.7■□□□□ 0.42
VCAN-204ENST00000502527 MROH7Q68CQ1 1323 aa17.69■□□□□ 0.42
VCAN-204ENST00000502527 COL11A1P12107 1806 aaPredicted RBP17.69■□□□□ 0.42
VCAN-204ENST00000502527 LRRIQ4A6NIV6 560 aa17.69■□□□□ 0.42
VCAN-204ENST00000502527 DCDC2CA8MYV0 355 aa17.69■□□□□ 0.42
VCAN-204ENST00000502527 CAND2O75155 1236 aa17.69■□□□□ 0.42
VCAN-204ENST00000502527 SHBGP04278 402 aa17.69■□□□□ 0.42
VCAN-204ENST00000502527 GLRA2P23416 452 aa17.69■□□□□ 0.42
VCAN-204ENST00000502527 RRM1P23921 792 aa17.69■□□□□ 0.42
VCAN-204ENST00000502527 TMOD1P28289 359 aa17.69■□□□□ 0.42
VCAN-204ENST00000502527 MAN1A1P33908 653 aa17.69■□□□□ 0.42
VCAN-204ENST00000502527 ARL2P36404 184 aa17.69■□□□□ 0.42
VCAN-204ENST00000502527 CALCOCO2Q13137 446 aa17.69■□□□□ 0.42
VCAN-204ENST00000502527 SGO2Q562F6 1265 aa17.69■□□□□ 0.42
VCAN-204ENST00000502527 LIN9Q5TKA1 542 aa17.69■□□□□ 0.42
VCAN-204ENST00000502527 TRIM72Q6ZMU5 477 aa17.69■□□□□ 0.42
VCAN-204ENST00000502527 CEP89Q96ST8 783 aa17.69■□□□□ 0.42
VCAN-204ENST00000502527 NIFKQ9BYG3 293 aaKnown RBP17.69■□□□□ 0.42
VCAN-204ENST00000502527 ZBTB7AO95365 584 aa17.68■□□□□ 0.42
VCAN-204ENST00000502527 POTEJP0CG39 1038 aa17.68■□□□□ 0.42
VCAN-204ENST00000502527 RARGP13631 454 aa17.68■□□□□ 0.42
VCAN-204ENST00000502527 KCNJ1P48048 391 aa17.68■□□□□ 0.42
VCAN-204ENST00000502527 CUL2Q13617 745 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms