RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 DDCP20711 480 aa3.32□□□□□ -1.88
SMAD1-203ENST00000502342 KIF23Q02241 960 aaPredicted RBP3.32□□□□□ -1.88
SMAD1-203ENST00000502342 CREMQ03060 361 aa3.32□□□□□ -1.88
SMAD1-203ENST00000502342 MGAT2Q10469 447 aa3.32□□□□□ -1.88
SMAD1-203ENST00000502342 RESTQ13127 1097 aa3.32□□□□□ -1.88
SMAD1-203ENST00000502342 LY6G5CQ5SRR4 150 aa3.32□□□□□ -1.88
SMAD1-203ENST00000502342 FAM102AQ5T9C2 384 aaPredicted RBP3.32□□□□□ -1.88
SMAD1-203ENST00000502342 EFCAB2Q5VUJ9 269 aa3.32□□□□□ -1.88
SMAD1-203ENST00000502342 MIGA2Q7L4E1 593 aa3.32□□□□□ -1.88
SMAD1-203ENST00000502342 GPR150Q8NGU9 434 aa3.32□□□□□ -1.88
SMAD1-203ENST00000502342 SSH1Q8WYL5 1049 aa3.32□□□□□ -1.88
SMAD1-203ENST00000502342 ZSWIM1Q9BR11 485 aa3.32□□□□□ -1.88
SMAD1-203ENST00000502342 WDR11Q9BZH6 1224 aa3.32□□□□□ -1.88
SMAD1-203ENST00000502342 TDP1Q9NUW8 608 aa3.32□□□□□ -1.88
SMAD1-203ENST00000502342 FBXO34Q9NWN3 711 aa3.32□□□□□ -1.88
SMAD1-203ENST00000502342 SLC23A1Q9UHI7 598 aa3.32□□□□□ -1.88
SMAD1-203ENST00000502342 LIMCH1Q9UPQ0 1083 aa3.32□□□□□ -1.88
SMAD1-203ENST00000502342 AATKQ6ZMQ8 1374 aa3.32□□□□□ -1.88
SMAD1-203ENST00000502342 COL4A3Q01955 1670 aa3.31□□□□□ -1.88
SMAD1-203ENST00000502342 A0A087X1B8 175 aa3.31□□□□□ -1.88
SMAD1-203ENST00000502342 CCDC78A2IDD5 438 aa3.31□□□□□ -1.88
SMAD1-203ENST00000502342 TMEM191CA6NGB0 347 aa3.31□□□□□ -1.88
SMAD1-203ENST00000502342 CCDC154A6NI56 674 aa3.31□□□□□ -1.88
SMAD1-203ENST00000502342 DIRC3C9JPN6 131 aa3.31□□□□□ -1.88
SMAD1-203ENST00000502342 RAMP2O60895 175 aa3.31□□□□□ -1.88
SMAD1-203ENST00000502342 GPR32O75388 356 aa3.31□□□□□ -1.88
SMAD1-203ENST00000502342 SBK3P0C264 359 aa3.31□□□□□ -1.88
SMAD1-203ENST00000502342 KRT4P19013 534 aa3.31□□□□□ -1.88
SMAD1-203ENST00000502342 GUCY1A2P33402 732 aa3.31□□□□□ -1.88
SMAD1-203ENST00000502342 DPTQ07507 201 aa3.31□□□□□ -1.88
SMAD1-203ENST00000502342 ATP2B3Q16720 1220 aa3.31□□□□□ -1.88
SMAD1-203ENST00000502342 PTPROQ16827 1216 aa3.31□□□□□ -1.88
SMAD1-203ENST00000502342 C3orf36Q3SXR2 165 aa3.31□□□□□ -1.88
SMAD1-203ENST00000502342 SPDYE7PQ495Y7 208 aa3.31□□□□□ -1.88
SMAD1-203ENST00000502342 Q6ZPA2 131 aa3.31□□□□□ -1.88
SMAD1-203ENST00000502342 PLXDC1Q8IUK5 500 aa3.31□□□□□ -1.88
SMAD1-203ENST00000502342 DRC7Q8IY82 874 aa3.31□□□□□ -1.88
SMAD1-203ENST00000502342 CMTR2Q8IYT2 770 aaKnown RBP3.31□□□□□ -1.88
SMAD1-203ENST00000502342 ULK2Q8IYT8 1036 aa3.31□□□□□ -1.88
SMAD1-203ENST00000502342 CPEB3Q8NE35 698 aaKnown RBP3.31□□□□□ -1.88
SMAD1-203ENST00000502342 KAT5Q92993 513 aa3.31□□□□□ -1.88
SMAD1-203ENST00000502342 HDAC10Q969S8 669 aa3.31□□□□□ -1.88
SMAD1-203ENST00000502342 LENG9Q96B70 501 aa3.31□□□□□ -1.88
SMAD1-203ENST00000502342 MARS2Q96GW9 593 aaKnown RBP3.31□□□□□ -1.88
SMAD1-203ENST00000502342 TMX3Q96JJ7 454 aa3.31□□□□□ -1.88
SMAD1-203ENST00000502342 TEKT5Q96M29 485 aa3.31□□□□□ -1.88
SMAD1-203ENST00000502342 CEP89Q96ST8 783 aa3.31□□□□□ -1.88
SMAD1-203ENST00000502342 HOMER2Q9NSB8 354 aa3.31□□□□□ -1.88
SMAD1-203ENST00000502342 CHST2Q9Y4C5 530 aa3.31□□□□□ -1.88
SMAD1-203ENST00000502342 NOX1Q9Y5S8 564 aa3.31□□□□□ -1.88
SMAD1-203ENST00000502342 FPGT-TNNI3KV9GXZ4 949 aa3.31□□□□□ -1.88
SMAD1-203ENST00000502342 GAGE12BA1L429 117 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 GAGE12HA6NDE8 117 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 HTRA2O43464 458 aaPredicted RBP3.3□□□□□ -1.88
SMAD1-203ENST00000502342 SNUPNO95149 360 aaKnown RBP3.3□□□□□ -1.88
SMAD1-203ENST00000502342 ELANEP08246 267 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 ALAS1P13196 640 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 EDNRBP24530 442 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 INHBCP55103 352 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 ZNF280AP59817 542 aaPredicted RBP3.3□□□□□ -1.88
SMAD1-203ENST00000502342 ANAPC15P60006 121 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 TARDBPQ13148 414 aaKnown RBP eCLIP3.3□□□□□ -1.88
SMAD1-203ENST00000502342 MTM1Q13496 603 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 TP53BP2Q13625 1128 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 UAP1L1Q3KQV9 507 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 FOXR2Q6PJQ5 311 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 GADL1Q6ZQY3 521 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 RHOUQ7L0Q8 258 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 LDLRAD3Q86YD5 345 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 MAPKAPK5Q8IW41 473 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 TMEM132CQ8N3T6 1108 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 LCORLQ8N3X6 602 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 OR56A1Q8NGH5 318 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 TBC1D15Q8TC07 691 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 CASKIN2Q8WXE0 1202 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 COA7Q96BR5 231 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 MYEOVQ96EZ4 313 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 GPATCH3Q96I76 525 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 CLPTM1LQ96KA5 538 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 SERHL2Q9H4I8 314 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 CYP4F11Q9HBI6 524 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 KLHL11Q9NVR0 708 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 RNF181Q9P0P0 153 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 USP25Q9UHP3 1055 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 SERPINB13Q9UIV8 391 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 SPEF1Q9Y4P9 236 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 PCDHB1Q9Y5F3 818 aa3.3□□□□□ -1.88
SMAD1-203ENST00000502342 WDR33Q9C0J8 1336 aaKnown RBP3.29□□□□□ -1.88
SMAD1-203ENST00000502342 A0A1B0GTW7 788 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 LOC105371045A0A1W2PR82 267 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 TMEM200CA6NKL6 621 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 FZD9O00144 591 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 FOXN1O15353 648 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 ERN1O75460 977 aaKnown RBP3.29□□□□□ -1.88
SMAD1-203ENST00000502342 GCP02774 474 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 RPLP2P05387 115 aaKnown RBP3.29□□□□□ -1.88
SMAD1-203ENST00000502342 CKBP12277 381 aa3.29□□□□□ -1.88
SMAD1-203ENST00000502342 DDX6P26196 483 aaKnown RBP eCLIP3.29□□□□□ -1.88
SMAD1-203ENST00000502342 ZEB1P37275 1124 aaPredicted RBP3.29□□□□□ -1.88
SMAD1-203ENST00000502342 PLA2G5P39877 138 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms