RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 CCDC183Q5T5S1 534 aa15.4■□□□□ 0.06
RNF4-202ENST00000502316 CBWD2Q8IUF1 395 aa15.4■□□□□ 0.06
RNF4-202ENST00000502316 ZC3H3Q8IXZ2 948 aaKnown RBP15.4■□□□□ 0.06
RNF4-202ENST00000502316 SLC39A11Q8N1S5 342 aa15.4■□□□□ 0.06
RNF4-202ENST00000502316 KLHL23Q8NBE8 558 aa15.4■□□□□ 0.06
RNF4-202ENST00000502316 TMEM63CQ9P1W3 806 aa15.4■□□□□ 0.06
RNF4-202ENST00000502316 C2CD2Q9Y426 696 aa15.4■□□□□ 0.06
RNF4-202ENST00000502316 NRP1O14786 923 aa15.39■□□□□ 0.05
RNF4-202ENST00000502316 EXOC3O60645 756 aa15.39■□□□□ 0.05
RNF4-202ENST00000502316 LPXNO60711 386 aa15.39■□□□□ 0.05
RNF4-202ENST00000502316 FGF18O76093 207 aa15.39■□□□□ 0.05
RNF4-202ENST00000502316 ALDH2P05091 517 aa15.39■□□□□ 0.05
RNF4-202ENST00000502316 ITGB1P05556 798 aa15.39■□□□□ 0.05
RNF4-202ENST00000502316 CYP3A5P20815 502 aa15.39■□□□□ 0.05
RNF4-202ENST00000502316 NR2F2P24468 414 aa15.39■□□□□ 0.05
RNF4-202ENST00000502316 CCNE1P24864 410 aa15.39■□□□□ 0.05
RNF4-202ENST00000502316 PMS1P54277 932 aaKnown RBP15.39■□□□□ 0.05
RNF4-202ENST00000502316 WNT7BP56706 349 aa15.39■□□□□ 0.05
RNF4-202ENST00000502316 SOX4Q06945 474 aaPredicted RBP15.39■□□□□ 0.05
RNF4-202ENST00000502316 JADE1Q6IE81 842 aa15.39■□□□□ 0.05
RNF4-202ENST00000502316 Q7L0L9 218 aa15.39■□□□□ 0.05
RNF4-202ENST00000502316 TMEM173Q86WV6 379 aaPredicted RBP15.39■□□□□ 0.05
RNF4-202ENST00000502316 NT5DC4Q86YG4 428 aa15.39■□□□□ 0.05
RNF4-202ENST00000502316 DEFB123Q8N688 67 aa15.39■□□□□ 0.05
RNF4-202ENST00000502316 KIF12Q96FN5 646 aa15.39■□□□□ 0.05
RNF4-202ENST00000502316 UROC1Q96N76 676 aa15.39■□□□□ 0.05
RNF4-202ENST00000502316 PRDM12Q9H4Q4 367 aa15.39■□□□□ 0.05
RNF4-202ENST00000502316 MARCH5Q9NX47 278 aa15.39■□□□□ 0.05
RNF4-202ENST00000502316 SPG21Q9NZD8 308 aa15.39■□□□□ 0.05
RNF4-202ENST00000502316 CASTOR2A6NHX0 329 aa15.38■□□□□ 0.05
RNF4-202ENST00000502316 MAPK13O15264 365 aa15.38■□□□□ 0.05
RNF4-202ENST00000502316 EFEMP2O95967 443 aa15.38■□□□□ 0.05
RNF4-202ENST00000502316 NFICP08651 508 aa15.38■□□□□ 0.05
RNF4-202ENST00000502316 RPL13P26373 211 aaKnown RBP15.38■□□□□ 0.05
RNF4-202ENST00000502316 OR1G1P47890 313 aa15.38■□□□□ 0.05
RNF4-202ENST00000502316 UBE3AQ05086 875 aa15.38■□□□□ 0.05
RNF4-202ENST00000502316 CYP24A1Q07973 514 aa15.38■□□□□ 0.05
RNF4-202ENST00000502316 GPM6BQ13491 265 aa15.38■□□□□ 0.05
RNF4-202ENST00000502316 TMEM132DQ14C87 1099 aa15.38■□□□□ 0.05
RNF4-202ENST00000502316 UPP1Q16831 310 aa15.38■□□□□ 0.05
RNF4-202ENST00000502316 SPATA1Q5VX52 437 aa15.38■□□□□ 0.05
RNF4-202ENST00000502316 EFCAB13Q8IY85 973 aa15.38■□□□□ 0.05
RNF4-202ENST00000502316 MLKLQ8NB16 471 aa15.38■□□□□ 0.05
RNF4-202ENST00000502316 GDPD5Q8WTR4 605 aa15.38■□□□□ 0.05
RNF4-202ENST00000502316 BCL7CQ8WUZ0 217 aaPredicted RBP15.38■□□□□ 0.05
RNF4-202ENST00000502316 C18orf25Q96B23 403 aaPredicted RBP15.38■□□□□ 0.05
RNF4-202ENST00000502316 IGSF21Q96ID5 467 aa15.38■□□□□ 0.05
RNF4-202ENST00000502316 MFSD14AQ96MC6 490 aa15.38■□□□□ 0.05
RNF4-202ENST00000502316 FAM161BQ96MY7 647 aa15.38■□□□□ 0.05
RNF4-202ENST00000502316 PAAF1Q9BRP4 392 aa15.38■□□□□ 0.05
RNF4-202ENST00000502316 GOLGA2P5Q9HBQ8 144 aa15.38■□□□□ 0.05
RNF4-202ENST00000502316 MTMR10Q9NXD2 777 aa15.38■□□□□ 0.05
RNF4-202ENST00000502316 UBQLN1Q9UMX0 589 aaKnown RBP15.38■□□□□ 0.05
RNF4-202ENST00000502316 LZTS1Q9Y250 596 aa15.38■□□□□ 0.05
RNF4-202ENST00000502316 FAN1Q9Y2M0 1017 aa15.38■□□□□ 0.05
RNF4-202ENST00000502316 MYO9BQ13459 2157 aa15.38■□□□□ 0.05
RNF4-202ENST00000502316 PLXNA4Q9HCM2 1894 aa15.37■□□□□ 0.05
RNF4-202ENST00000502316 TRIM49BA6NDI0 452 aa15.37■□□□□ 0.05
RNF4-202ENST00000502316 NT5C1B-RDH14C9J2C7 533 aa15.37■□□□□ 0.05
RNF4-202ENST00000502316 TMEM189-UBE2V1I3L0A0 370 aa15.37■□□□□ 0.05
RNF4-202ENST00000502316 XPOTO43592 962 aaKnown RBP15.37■□□□□ 0.05
RNF4-202ENST00000502316 AKAP3O75969 853 aa15.37■□□□□ 0.05
RNF4-202ENST00000502316 POU3F3P20264 500 aaPredicted RBP15.37■□□□□ 0.05
RNF4-202ENST00000502316 LRPAP1P30533 357 aa15.37■□□□□ 0.05
RNF4-202ENST00000502316 RPL9P32969 192 aaKnown RBP15.37■□□□□ 0.05
RNF4-202ENST00000502316 CASP4P49662 377 aa15.37■□□□□ 0.05
RNF4-202ENST00000502316 NLRP12P59046 1061 aa15.37■□□□□ 0.05
RNF4-202ENST00000502316 MCCD1P59942 119 aaPredicted RBP15.37■□□□□ 0.05
RNF4-202ENST00000502316 SPAG1Q07617 926 aa15.37■□□□□ 0.05
RNF4-202ENST00000502316 PAK1Q13153 545 aa15.37■□□□□ 0.05
RNF4-202ENST00000502316 PSMD6Q15008 389 aa15.37■□□□□ 0.05
RNF4-202ENST00000502316 SURF1Q15526 300 aa15.37■□□□□ 0.05
RNF4-202ENST00000502316 DPCR1Q3MIW9 517 aa15.37■□□□□ 0.05
RNF4-202ENST00000502316 ANKRD40Q6AI12 368 aa15.37■□□□□ 0.05
RNF4-202ENST00000502316 TTI2Q6NXR4 508 aa15.37■□□□□ 0.05
RNF4-202ENST00000502316 RDH13Q8NBN7 331 aa15.37■□□□□ 0.05
RNF4-202ENST00000502316 SPPL3Q8TCT6 385 aa15.37■□□□□ 0.05
RNF4-202ENST00000502316 NOC3LQ8WTT2 800 aaKnown RBP15.37■□□□□ 0.05
RNF4-202ENST00000502316 SYAP1Q96A49 352 aaPredicted RBP15.37■□□□□ 0.05
RNF4-202ENST00000502316 FAM212AQ96EL1 285 aa15.37■□□□□ 0.05
RNF4-202ENST00000502316 DDX27Q96GQ7 796 aaKnown RBP15.37■□□□□ 0.05
RNF4-202ENST00000502316 TMEM169Q96HH4 297 aa15.37■□□□□ 0.05
RNF4-202ENST00000502316 GUCD1Q96NT3 240 aa15.37■□□□□ 0.05
RNF4-202ENST00000502316 TSG101Q99816 390 aa15.37■□□□□ 0.05
RNF4-202ENST00000502316 LMAN2LQ9H0V9 348 aa15.37■□□□□ 0.05
RNF4-202ENST00000502316 GZF1Q9H116 711 aaPredicted RBP15.37■□□□□ 0.05
RNF4-202ENST00000502316 PDE11AQ9HCR9 933 aa15.37■□□□□ 0.05
RNF4-202ENST00000502316 CACNG4Q9UBN1 327 aa15.37■□□□□ 0.05
RNF4-202ENST00000502316 STK39Q9UEW8 545 aa15.37■□□□□ 0.05
RNF4-202ENST00000502316 TUBGCP4Q9UGJ1 667 aa15.37■□□□□ 0.05
RNF4-202ENST00000502316 PRG3Q9Y2Y8 225 aaPredicted RBP15.37■□□□□ 0.05
RNF4-202ENST00000502316 COL6A3P12111 3177 aa15.36■□□□□ 0.05
RNF4-202ENST00000502316 BICDL2A1A5D9 508 aa15.36■□□□□ 0.05
RNF4-202ENST00000502316 F8W810 466 aa15.36■□□□□ 0.05
RNF4-202ENST00000502316 RFXAPO00287 272 aa15.36■□□□□ 0.05
RNF4-202ENST00000502316 GRM6O15303 877 aa15.36■□□□□ 0.05
RNF4-202ENST00000502316 CLCNKBP51801 687 aa15.36■□□□□ 0.05
RNF4-202ENST00000502316 CLDN10P78369 228 aa15.36■□□□□ 0.05
RNF4-202ENST00000502316 FKBP3Q00688 224 aaKnown RBP15.36■□□□□ 0.05
RNF4-202ENST00000502316 KRT17Q04695 432 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms