RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 MTMR12Q9C0I1 747 aa19.63■□□□□ 0.73
LINC00535-201ENST00000501400 ISCUQ9H1K1 167 aa19.63■□□□□ 0.73
LINC00535-201ENST00000501400 ZFYVE28Q9HCC9 887 aa19.63■□□□□ 0.73
LINC00535-201ENST00000501400 PACSIN2Q9UNF0 486 aaPredicted RBP19.63■□□□□ 0.73
LINC00535-201ENST00000501400 UMODL1Q5DID0 1318 aa19.62■□□□□ 0.73
LINC00535-201ENST00000501400 RGS2P41220 211 aa19.62■□□□□ 0.73
LINC00535-201ENST00000501400 CKAP4Q07065 602 aaKnown RBP19.62■□□□□ 0.73
LINC00535-201ENST00000501400 ZNF572Q7Z3I7 529 aaPredicted RBP19.62■□□□□ 0.73
LINC00535-201ENST00000501400 EFCAB13Q8IY85 973 aa19.62■□□□□ 0.73
LINC00535-201ENST00000501400 TMEM192Q8IY95 271 aa19.62■□□□□ 0.73
LINC00535-201ENST00000501400 THNSL1Q8IYQ7 743 aa19.62■□□□□ 0.73
LINC00535-201ENST00000501400 LMBR1Q8WVP7 490 aa19.62■□□□□ 0.73
LINC00535-201ENST00000501400 THAP2Q9H0W7 228 aa19.62■□□□□ 0.73
LINC00535-201ENST00000501400 OSGEPQ9NPF4 335 aa19.62■□□□□ 0.73
LINC00535-201ENST00000501400 TSKSQ9UJT2 592 aa19.62■□□□□ 0.73
LINC00535-201ENST00000501400 CENPFP49454 3210 aa19.62■□□□□ 0.73
LINC00535-201ENST00000501400 ANKRD62A6NC57 917 aa19.61■□□□□ 0.73
LINC00535-201ENST00000501400 GPR25O00155 361 aa19.61■□□□□ 0.73
LINC00535-201ENST00000501400 CALCAP01258 141 aa19.61■□□□□ 0.73
LINC00535-201ENST00000501400 ACO1P21399 889 aaKnown RBP19.61■□□□□ 0.73
LINC00535-201ENST00000501400 TMOD1P28289 359 aa19.61■□□□□ 0.73
LINC00535-201ENST00000501400 NOP2P46087 812 aaKnown RBP19.61■□□□□ 0.73
LINC00535-201ENST00000501400 PDE6CP51160 858 aa19.61■□□□□ 0.73
LINC00535-201ENST00000501400 NOP14P78316 857 aaKnown RBP19.61■□□□□ 0.73
LINC00535-201ENST00000501400 NCOA4Q13772 614 aa19.61■□□□□ 0.73
LINC00535-201ENST00000501400 WDR44Q5JSH3 913 aa19.61■□□□□ 0.73
LINC00535-201ENST00000501400 MTERF4Q7Z6M4 381 aaKnown RBP19.61■□□□□ 0.73
LINC00535-201ENST00000501400 SLFN11Q7Z7L1 901 aa19.61■□□□□ 0.73
LINC00535-201ENST00000501400 KIAA0319LQ8IZA0 1049 aa19.61■□□□□ 0.73
LINC00535-201ENST00000501400 PPP1R13LQ8WUF5 828 aa19.61■□□□□ 0.73
LINC00535-201ENST00000501400 SOCS4Q8WXH5 440 aa19.61■□□□□ 0.73
LINC00535-201ENST00000501400 CTNNBL1Q8WYA6 563 aaPredicted RBP19.61■□□□□ 0.73
LINC00535-201ENST00000501400 FAM81BQ96LP2 452 aa19.61■□□□□ 0.73
LINC00535-201ENST00000501400 SETD4Q9NVD3 440 aa19.61■□□□□ 0.73
LINC00535-201ENST00000501400 EHD2Q9NZN4 543 aa19.61■□□□□ 0.73
LINC00535-201ENST00000501400 NUB1Q9Y5A7 615 aa19.61■□□□□ 0.73
LINC00535-201ENST00000501400 MEFVO15553 781 aaPredicted RBP19.61■□□□□ 0.73
LINC00535-201ENST00000501400 CLTAP09496 248 aa19.61■□□□□ 0.73
LINC00535-201ENST00000501400 CLCN6P51797 869 aa19.61■□□□□ 0.73
LINC00535-201ENST00000501400 CDR2Q01850 454 aa19.61■□□□□ 0.73
LINC00535-201ENST00000501400 SREBF2Q12772 1141 aa19.61■□□□□ 0.73
LINC00535-201ENST00000501400 CUL2Q13617 745 aa19.61■□□□□ 0.73
LINC00535-201ENST00000501400 IFI16Q16666 785 aaKnown RBP19.61■□□□□ 0.73
LINC00535-201ENST00000501400 MSANTD4Q8NCY6 345 aa19.61■□□□□ 0.73
LINC00535-201ENST00000501400 PDZD7Q9H5P4 517 aa19.61■□□□□ 0.73
LINC00535-201ENST00000501400 SMARCAL1Q9NZC9 954 aa19.61■□□□□ 0.73
LINC00535-201ENST00000501400 TNPO2O14787 897 aaKnown RBP19.6■□□□□ 0.73
LINC00535-201ENST00000501400 KRT5P13647 590 aa19.6■□□□□ 0.73
LINC00535-201ENST00000501400 AP3M2P53677 418 aa19.6■□□□□ 0.73
LINC00535-201ENST00000501400 OSTNP61366 133 aa19.6■□□□□ 0.73
LINC00535-201ENST00000501400 TMEM132AQ24JP5 1023 aa19.6■□□□□ 0.73
LINC00535-201ENST00000501400 SLC35G2Q8TBE7 412 aa19.6■□□□□ 0.73
LINC00535-201ENST00000501400 MAP7D2Q96T17 732 aa19.6■□□□□ 0.73
LINC00535-201ENST00000501400 PARD6BQ9BYG5 372 aa19.6■□□□□ 0.73
LINC00535-201ENST00000501400 COG5Q9UP83 839 aa19.6■□□□□ 0.73
LINC00535-201ENST00000501400 ASS1P00966 412 aaKnown RBP19.59■□□□□ 0.73
LINC00535-201ENST00000501400 CST3P01034 146 aaPredicted RBP19.59■□□□□ 0.73
LINC00535-201ENST00000501400 FTLP02792 175 aaPredicted RBP19.59■□□□□ 0.73
LINC00535-201ENST00000501400 SMIM10L2AP0DMW4 78 aa19.59■□□□□ 0.73
LINC00535-201ENST00000501400 SMIM10L2BP0DMW5 78 aa19.59■□□□□ 0.73
LINC00535-201ENST00000501400 CXCL8P10145 99 aa19.59■□□□□ 0.73
LINC00535-201ENST00000501400 ARF4P18085 180 aaPredicted RBP19.59■□□□□ 0.73
LINC00535-201ENST00000501400 HIC1Q14526 733 aa19.59■□□□□ 0.73
LINC00535-201ENST00000501400 CAGE1Q8TC20 777 aa19.59■□□□□ 0.73
LINC00535-201ENST00000501400 NLRP7Q8WX94 980 aa19.59■□□□□ 0.73
LINC00535-201ENST00000501400 CCDC102AQ96A19 550 aa19.59■□□□□ 0.73
LINC00535-201ENST00000501400 FAM212AQ96EL1 285 aa19.59■□□□□ 0.73
LINC00535-201ENST00000501400 CPB2Q96IY4 423 aa19.59■□□□□ 0.73
LINC00535-201ENST00000501400 PNKPQ96T60 521 aa19.59■□□□□ 0.73
LINC00535-201ENST00000501400 ZNF446Q9NWS9 450 aa19.59■□□□□ 0.73
LINC00535-201ENST00000501400 ZEB2O60315 1214 aa19.59■□□□□ 0.73
LINC00535-201ENST00000501400 B4GALT4O60513 344 aa19.59■□□□□ 0.73
LINC00535-201ENST00000501400 RTN2O75298 545 aa19.59■□□□□ 0.73
LINC00535-201ENST00000501400 GZMAP12544 262 aa19.59■□□□□ 0.73
LINC00535-201ENST00000501400 TM4SF4P48230 202 aa19.59■□□□□ 0.73
LINC00535-201ENST00000501400 SURF1Q15526 300 aa19.59■□□□□ 0.73
LINC00535-201ENST00000501400 UBR7Q8N806 425 aa19.59■□□□□ 0.73
LINC00535-201ENST00000501400 RPGRIP1Q96KN7 1286 aa19.59■□□□□ 0.73
LINC00535-201ENST00000501400 STXBP5LQ9Y2K9 1186 aa19.59■□□□□ 0.73
LINC00535-201ENST00000501400 TRIP12Q14669 1992 aaPredicted RBP19.58■□□□□ 0.72
LINC00535-201ENST00000501400 TSPAN1O60635 241 aa19.58■□□□□ 0.72
LINC00535-201ENST00000501400 PHACTR2O75167 634 aa19.58■□□□□ 0.72
LINC00535-201ENST00000501400 DNA2P51530 1060 aa19.58■□□□□ 0.72
LINC00535-201ENST00000501400 TUBB4BP68371 445 aa19.58■□□□□ 0.72
LINC00535-201ENST00000501400 C2orf54Q08AI8 447 aa19.58■□□□□ 0.72
LINC00535-201ENST00000501400 ZNF410Q86VK4 478 aa19.58■□□□□ 0.72
LINC00535-201ENST00000501400 ABT1Q9ULW3 272 aaKnown RBP19.58■□□□□ 0.72
LINC00535-201ENST00000501400 MBLAC1A4D2B0 266 aaPredicted RBP19.57■□□□□ 0.72
LINC00535-201ENST00000501400 RRN3P2A6NIE6 340 aa19.57■□□□□ 0.72
LINC00535-201ENST00000501400 HAS3O00219 553 aa19.57■□□□□ 0.72
LINC00535-201ENST00000501400 BUB1BO60566 1050 aaPredicted RBP19.57■□□□□ 0.72
LINC00535-201ENST00000501400 KIF4AO95239 1232 aa19.57■□□□□ 0.72
LINC00535-201ENST00000501400 RHOXF2BP0C7M4 288 aa19.57■□□□□ 0.72
LINC00535-201ENST00000501400 MCF2P10911 925 aa19.57■□□□□ 0.72
LINC00535-201ENST00000501400 MFSD10Q14728 455 aa19.57■□□□□ 0.72
LINC00535-201ENST00000501400 PTPROQ16827 1216 aa19.57■□□□□ 0.72
LINC00535-201ENST00000501400 DUOXA2Q1HG44 320 aa19.57■□□□□ 0.72
LINC00535-201ENST00000501400 MS4A14Q96JA4 679 aa19.57■□□□□ 0.72
LINC00535-201ENST00000501400 RHOXF2Q9BQY4 288 aa19.57■□□□□ 0.72
LINC00535-201ENST00000501400 ADAMTS10Q9H324 1103 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms