RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 MXI1P50539 228 aa17.52■□□□□ 0.4
COL6A1-206ENST00000498614 PEX5P50542 639 aa17.52■□□□□ 0.4
COL6A1-206ENST00000498614 HADHBP55084 474 aaKnown RBP17.52■□□□□ 0.4
COL6A1-206ENST00000498614 MAP3K10Q02779 954 aa17.52■□□□□ 0.4
COL6A1-206ENST00000498614 MYO1EQ12965 1108 aa17.52■□□□□ 0.4
COL6A1-206ENST00000498614 MESDQ14696 234 aa17.52■□□□□ 0.4
COL6A1-206ENST00000498614 CRELD2Q6UXH1 353 aaPredicted RBP17.52■□□□□ 0.4
COL6A1-206ENST00000498614 OTUD6AQ7L8S5 288 aa17.52■□□□□ 0.4
COL6A1-206ENST00000498614 CROCCP2Q86T23 111 aa17.52■□□□□ 0.4
COL6A1-206ENST00000498614 C12orf56Q8IXR9 622 aa17.52■□□□□ 0.4
COL6A1-206ENST00000498614 ART4Q93070 314 aa17.52■□□□□ 0.4
COL6A1-206ENST00000498614 FAM212AQ96EL1 285 aa17.52■□□□□ 0.4
COL6A1-206ENST00000498614 EBF2Q9HAK2 575 aa17.52■□□□□ 0.4
COL6A1-206ENST00000498614 TBC1D22BQ9NU19 505 aa17.52■□□□□ 0.4
COL6A1-206ENST00000498614 TCEAL9Q9UHQ7 104 aa17.52■□□□□ 0.4
COL6A1-206ENST00000498614 TESPA1A2RU30 521 aaPredicted RBP17.52■□□□□ 0.39
COL6A1-206ENST00000498614 SGPL1O95470 568 aa17.52■□□□□ 0.39
COL6A1-206ENST00000498614 PYGMP11217 842 aa17.52■□□□□ 0.39
COL6A1-206ENST00000498614 CHRM1P11229 460 aaPredicted RBP17.52■□□□□ 0.39
COL6A1-206ENST00000498614 NQO1P15559 274 aaKnown RBP17.52■□□□□ 0.39
COL6A1-206ENST00000498614 CREB1P16220 341 aa17.52■□□□□ 0.39
COL6A1-206ENST00000498614 GBP1P32455 592 aa17.52■□□□□ 0.39
COL6A1-206ENST00000498614 MAP2K1Q02750 393 aaPredicted RBP17.52■□□□□ 0.39
COL6A1-206ENST00000498614 CRYMQ14894 314 aa17.52■□□□□ 0.39
COL6A1-206ENST00000498614 SLMAPQ14BN4 828 aa17.52■□□□□ 0.39
COL6A1-206ENST00000498614 LONRF1Q17RB8 773 aa17.52■□□□□ 0.39
COL6A1-206ENST00000498614 XKR9Q5GH70 373 aa17.52■□□□□ 0.39
COL6A1-206ENST00000498614 CBWD2Q8IUF1 395 aa17.52■□□□□ 0.39
COL6A1-206ENST00000498614 SAAL1Q96ER3 474 aa17.52■□□□□ 0.39
COL6A1-206ENST00000498614 DDX23Q9BUQ8 820 aaKnown RBP17.52■□□□□ 0.39
COL6A1-206ENST00000498614 STMN4Q9H169 189 aaPredicted RBP17.52■□□□□ 0.39
COL6A1-206ENST00000498614 FGFR1OP2Q9NVK5 253 aa17.52■□□□□ 0.39
COL6A1-206ENST00000498614 TCP11X1B4DZS4 312 aa17.51■□□□□ 0.39
COL6A1-206ENST00000498614 ATMINO43313 823 aaPredicted RBP17.51■□□□□ 0.39
COL6A1-206ENST00000498614 CCNE2O96020 404 aa17.51■□□□□ 0.39
COL6A1-206ENST00000498614 COILP38432 576 aaPredicted RBP17.51■□□□□ 0.39
COL6A1-206ENST00000498614 PDE6CP51160 858 aa17.51■□□□□ 0.39
COL6A1-206ENST00000498614 MKRN4PQ13434 485 aaPredicted RBP17.51■□□□□ 0.39
COL6A1-206ENST00000498614 ZNF268Q14587 947 aaPredicted RBP17.51■□□□□ 0.39
COL6A1-206ENST00000498614 MFSD5Q6N075 450 aa17.51■□□□□ 0.39
COL6A1-206ENST00000498614 NSMFQ6X4W1 530 aa17.51■□□□□ 0.39
COL6A1-206ENST00000498614 TAOK1Q7L7X3 1001 aa17.51■□□□□ 0.39
COL6A1-206ENST00000498614 CCDC105Q8IYK2 499 aa17.51■□□□□ 0.39
COL6A1-206ENST00000498614 PPM1KQ8N3J5 372 aa17.51■□□□□ 0.39
COL6A1-206ENST00000498614 AGAP11Q8TF27 550 aa17.51■□□□□ 0.39
COL6A1-206ENST00000498614 NSMCE1Q8WV22 266 aa17.51■□□□□ 0.39
COL6A1-206ENST00000498614 PCDHB18PQ96TA0 734 aa17.51■□□□□ 0.39
COL6A1-206ENST00000498614 RMDN3Q96TC7 470 aa17.51■□□□□ 0.39
COL6A1-206ENST00000498614 ECT2Q9H8V3 914 aa17.51■□□□□ 0.39
COL6A1-206ENST00000498614 USP15Q9Y4E8 981 aaPredicted RBP17.51■□□□□ 0.39
COL6A1-206ENST00000498614 PFASO15067 1338 aa17.51■□□□□ 0.39
COL6A1-206ENST00000498614 P4HA2O15460 535 aa17.51■□□□□ 0.39
COL6A1-206ENST00000498614 LYPLA2O95372 231 aa17.51■□□□□ 0.39
COL6A1-206ENST00000498614 ALDH5A1P51649 535 aaPredicted RBP17.51■□□□□ 0.39
COL6A1-206ENST00000498614 SEL1L2Q5TEA6 688 aa17.51■□□□□ 0.39
COL6A1-206ENST00000498614 DHX37Q8IY37 1157 aaKnown RBP17.51■□□□□ 0.39
COL6A1-206ENST00000498614 C4orf19Q8IY42 314 aa17.51■□□□□ 0.39
COL6A1-206ENST00000498614 DYDC1Q8WWB3 177 aa17.51■□□□□ 0.39
COL6A1-206ENST00000498614 LPAR1Q92633 364 aa17.51■□□□□ 0.39
COL6A1-206ENST00000498614 ELMO3Q96BJ8 720 aa17.51■□□□□ 0.39
COL6A1-206ENST00000498614 CCDC127Q96BQ5 260 aa17.51■□□□□ 0.39
COL6A1-206ENST00000498614 THOC1Q96FV9 657 aaKnown RBP17.51■□□□□ 0.39
COL6A1-206ENST00000498614 L3MBTL3Q96JM7 780 aaPredicted RBP17.51■□□□□ 0.39
COL6A1-206ENST00000498614 POP1Q99575 1024 aaKnown RBP17.51■□□□□ 0.39
COL6A1-206ENST00000498614 CTDP1Q9Y5B0 961 aaPredicted RBP17.51■□□□□ 0.39
COL6A1-206ENST00000498614 FOXO6A8MYZ6 492 aa17.5■□□□□ 0.39
COL6A1-206ENST00000498614 ANP32DO95626 131 aa17.5■□□□□ 0.39
COL6A1-206ENST00000498614 PAX7P23759 505 aa17.5■□□□□ 0.39
COL6A1-206ENST00000498614 NCKAP1LP55160 1127 aa17.5■□□□□ 0.39
COL6A1-206ENST00000498614 PSMC5P62195 406 aa17.5■□□□□ 0.39
COL6A1-206ENST00000498614 GHRHRQ02643 423 aa17.5■□□□□ 0.39
COL6A1-206ENST00000498614 NAA25Q14CX7 972 aa17.5■□□□□ 0.39
COL6A1-206ENST00000498614 GALNTL6Q49A17 601 aa17.5■□□□□ 0.39
COL6A1-206ENST00000498614 NOP9Q86U38 636 aaKnown RBP17.5■□□□□ 0.39
COL6A1-206ENST00000498614 PDCD2LQ9BRP1 358 aa17.5■□□□□ 0.39
COL6A1-206ENST00000498614 MLXIPLQ9NP71 852 aa17.5■□□□□ 0.39
COL6A1-206ENST00000498614 A0A1B0GUA9 196 aa17.5■□□□□ 0.39
COL6A1-206ENST00000498614 CYP26A1O43174 497 aa17.5■□□□□ 0.39
COL6A1-206ENST00000498614 GGPS1O95749 300 aa17.5■□□□□ 0.39
COL6A1-206ENST00000498614 ADSSP30520 456 aa17.5■□□□□ 0.39
COL6A1-206ENST00000498614 SOX10P56693 466 aa17.5■□□□□ 0.39
COL6A1-206ENST00000498614 GPC5P78333 572 aa17.5■□□□□ 0.39
COL6A1-206ENST00000498614 MTMR2Q13614 643 aa17.5■□□□□ 0.39
COL6A1-206ENST00000498614 SIX1Q15475 284 aaPredicted RBP17.5■□□□□ 0.39
COL6A1-206ENST00000498614 SNRNP35Q16560 246 aaKnown RBP17.5■□□□□ 0.39
COL6A1-206ENST00000498614 PAXIP1Q6ZW49 1069 aaPredicted RBP17.5■□□□□ 0.39
COL6A1-206ENST00000498614 SLC13A5Q86YT5 568 aaPredicted RBP17.5■□□□□ 0.39
COL6A1-206ENST00000498614 APOBEC3FQ8IUX4 373 aaKnown RBP17.5■□□□□ 0.39
COL6A1-206ENST00000498614 SEMA4DQ92854 862 aa17.5■□□□□ 0.39
COL6A1-206ENST00000498614 DCPSQ96C86 337 aaKnown RBP17.5■□□□□ 0.39
COL6A1-206ENST00000498614 BTBD6Q96KE9 485 aa17.5■□□□□ 0.39
COL6A1-206ENST00000498614 KREMEN1Q96MU8 473 aa17.5■□□□□ 0.39
COL6A1-206ENST00000498614 KIAA1683Q9H0B3 1180 aa17.5■□□□□ 0.39
COL6A1-206ENST00000498614 PXMP2Q9NR77 195 aa17.5■□□□□ 0.39
COL6A1-206ENST00000498614 TMEM120BA0PK00 339 aa17.49■□□□□ 0.39
COL6A1-206ENST00000498614 WDR64B1ANS9 1081 aa17.49■□□□□ 0.39
COL6A1-206ENST00000498614 IGF2BP3O00425 579 aaKnown RBP eCLIP17.49■□□□□ 0.39
COL6A1-206ENST00000498614 ACSL3O95573 720 aa17.49■□□□□ 0.39
COL6A1-206ENST00000498614 CHRNB2P17787 502 aa17.49■□□□□ 0.39
COL6A1-206ENST00000498614 LLGL1Q15334 1064 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms