RNA–Protein interactions for RNA: ENST00000498524.5

ANKRD28-213, Transcript of ankyrin repeat domain 28, human

TSL 2

Gene ANKRD28, Length 4,289 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ANKRD28-213	ENST00000498524	ALF	Q53S48	1182 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SLC45A4	Q5BKX6	768 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	MAP3K21	Q5TCX8	1036 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	LRCH2	Q5VUJ6	765 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	ARL6IP4	Q66PJ3	421 aa	Known RBP	4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	PI16	Q6UXB8	463 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SV2B	Q7L1I2	683 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	CROCCP2	Q86T23	111 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	HOOK3	Q86VS8	718 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	CACNA2D3	Q8IZS8	1091 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	MYO1H	Q8N1T3	1032 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	NOA1	Q8NC60	698 aa	Known RBP	4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	DIS3L	Q8TF46	1054 aa	Known RBP	4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	UBLCP1	Q8WVY7	318 aa	Predicted RBP	4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	GPRASP2	Q96D09	838 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	MAP3K14	Q99558	947 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	POLR3C	Q9BUI4	534 aa	Predicted RBP	4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SUGCT	Q9HAC7	445 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	FAM207A	Q9NSI2	230 aa	Predicted RBP	4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	EMILIN3	Q9NT22	766 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SLC8A2	Q9UPR5	921 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SORCS3	Q9UPU3	1222 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	MRPS23	Q9Y3D9	190 aa	Known RBP	4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SNED1	Q8TER0	1413 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	TMEM221	A6NGB7	291 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524		M0R296	226 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	LAD1	O00515	517 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	CHUK	O15111	745 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	EIF3H	O15372	352 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	PRPF3	O43395	683 aa	Known RBP	4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	ACTN4	O43707	911 aa	Known RBP	4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	RHOBTB1	O94844	696 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	ALDH2	P05091	517 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	MSL3P1	P0C860	447 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	EIF2AK2	P19525	551 aa	Known RBP	4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	NR1D1	P20393	614 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	ALDH5A1	P51649	535 aa	Predicted RBP	4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	KPNA1	P52294	538 aa	Predicted RBP	4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	CLNS1A	P54105	237 aa	Known RBP	4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SLC8A3	P57103	927 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	DYNLL1	P63167	89 aa	Known RBP	4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SIGLEC14	Q08ET2	396 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	IFT88	Q13099	833 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	AP3B2	Q13367	1082 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	NNT	Q13423	1086 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SNCB	Q16143	134 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	PPM1L	Q5SGD2	360 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	TMEM240	Q5SV17	173 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	GKAP1	Q5VSY0	366 aa	Predicted RBP	4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	KRT79	Q5XKE5	535 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	LRRC31	Q6UY01	552 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	RRAGA	Q7L523	313 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	ITIH5	Q86UX2	942 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	WHAMM	Q8TF30	809 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	P2RX5	Q93086	422 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	ACD	Q96AP0	544 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SHISA4	Q96DD7	197 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	CNOT6L	Q96LI5	555 aa	Known RBP	4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	STRBP	Q96SI9	672 aa	Known RBP	4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	NACA2	Q9H009	215 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	C2orf40	Q9H1Z8	148 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	RUBCNL	Q9H714	662 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	BRD9	Q9H8M2	597 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	ACAD8	Q9UKU7	415 aa		4.21	□□□□□ -1.74
ANKRD28-213	ENST00000498524	CASP8AP2	Q9UKL3	1982 aa		4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	hCG_1642624	A0A1W2PR95	340 aa		4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	TTC26	A0AVF1	554 aa		4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524		H3BRB1	525 aa		4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	PRDM1	O75626	825 aa		4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	HEXIM1	O94992	359 aa	Known RBP	4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	ATP1A1	P05023	1023 aa	Known RBP	4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	CTNNA1	P35221	906 aa	Known RBP	4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	GUCY2D	Q02846	1103 aa		4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	STRN3	Q13033	797 aa		4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	COL9A3	Q14050	684 aa	Predicted RBP	4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	FAM133B	Q5BKY9	247 aa	Known RBP	4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	PRAMEF19	Q5SWL8	479 aa		4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	NT5DC1	Q5TFE4	455 aa		4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	BTBD8	Q5XKL5	378 aa		4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	KCTD16	Q68DU8	428 aa		4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	GALNT17	Q6IS24	598 aa		4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	MAMDC4	Q6UXC1	1216 aa		4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	MIER3	Q7Z3K6	550 aa		4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	BLID	Q8IZY5	108 aa		4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	THEM5	Q8N1Q8	247 aa		4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	KIAA1958	Q8N8K9	716 aa		4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	PNMA1	Q8ND90	353 aa		4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	PPHLN1	Q8NEY8	458 aa	Known RBP	4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SRPK1	Q96SB4	655 aa	Known RBP	4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	NAP1L3	Q99457	506 aa	Predicted RBP	4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	PLIN2	Q99541	437 aa		4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	TUT1	Q9H6E5	874 aa	Known RBP	4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	CERS4	Q9HA82	394 aa		4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	PPAN	Q9NQ55	473 aa	Known RBP	4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SEPT11	Q9NVA2	429 aa	Known RBP	4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SLC38A7	Q9NVC3	462 aa		4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	TMEM260	Q9NX78	707 aa		4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	PARP2	Q9UGN5	583 aa		4.2	□□□□□ -1.74
ANKRD28-213	ENST00000498524	FZD1	Q9UP38	647 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms