RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 FLCNQ8NFG4 579 aa12.9□□□□□ -0.34
NUDCD3-211ENST00000497978 DDX27Q96GQ7 796 aaKnown RBP12.9□□□□□ -0.34
NUDCD3-211ENST00000497978 CDK5RAP3Q96JB5 506 aa12.9□□□□□ -0.34
NUDCD3-211ENST00000497978 PPP1R10Q96QC0 940 aaKnown RBP12.9□□□□□ -0.34
NUDCD3-211ENST00000497978 MYADMQ96S97 322 aa12.9□□□□□ -0.34
NUDCD3-211ENST00000497978 PHOX2BQ99453 314 aa12.9□□□□□ -0.34
NUDCD3-211ENST00000497978 ACO2Q99798 780 aaKnown RBP12.9□□□□□ -0.34
NUDCD3-211ENST00000497978 RUSC1Q9BVN2 902 aa12.9□□□□□ -0.34
NUDCD3-211ENST00000497978 CDT1Q9H211 546 aa12.9□□□□□ -0.34
NUDCD3-211ENST00000497978 CXCL16Q9H2A7 254 aa12.9□□□□□ -0.34
NUDCD3-211ENST00000497978 SLC38A7Q9NVC3 462 aa12.9□□□□□ -0.34
NUDCD3-211ENST00000497978 ARHGAP28Q9P2N2 729 aa12.9□□□□□ -0.34
NUDCD3-211ENST00000497978 ZFP37Q9Y6Q3 630 aaPredicted RBP12.9□□□□□ -0.34
NUDCD3-211ENST00000497978 TRIOO75962 3097 aa12.9□□□□□ -0.34
NUDCD3-211ENST00000497978 SMIM28A0A1B0GU29 152 aa12.89□□□□□ -0.35
NUDCD3-211ENST00000497978 H0Y858 1186 aa12.89□□□□□ -0.35
NUDCD3-211ENST00000497978 SLC16A4O15374 487 aa12.89□□□□□ -0.35
NUDCD3-211ENST00000497978 XYLBO75191 536 aa12.89□□□□□ -0.35
NUDCD3-211ENST00000497978 C8AP07357 584 aa12.89□□□□□ -0.35
NUDCD3-211ENST00000497978 MCF2P10911 925 aa12.89□□□□□ -0.35
NUDCD3-211ENST00000497978 LAMP2P13473 410 aa12.89□□□□□ -0.35
NUDCD3-211ENST00000497978 RFX1P22670 979 aa12.89□□□□□ -0.35
NUDCD3-211ENST00000497978 FSHRP23945 695 aa12.89□□□□□ -0.35
NUDCD3-211ENST00000497978 GUCY2CP25092 1073 aa12.89□□□□□ -0.35
NUDCD3-211ENST00000497978 GJB2P29033 226 aa12.89□□□□□ -0.35
NUDCD3-211ENST00000497978 MCM2P49736 904 aa12.89□□□□□ -0.35
NUDCD3-211ENST00000497978 CLCNKBP51801 687 aa12.89□□□□□ -0.35
NUDCD3-211ENST00000497978 SMTNP53814 917 aa12.89□□□□□ -0.35
NUDCD3-211ENST00000497978 OSTNP61366 133 aa12.89□□□□□ -0.35
NUDCD3-211ENST00000497978 UPP1Q16831 310 aa12.89□□□□□ -0.35
NUDCD3-211ENST00000497978 DAW1Q8N136 415 aa12.89□□□□□ -0.35
NUDCD3-211ENST00000497978 SIX5Q8N196 739 aa12.89□□□□□ -0.35
NUDCD3-211ENST00000497978 TMX3Q96JJ7 454 aa12.89□□□□□ -0.35
NUDCD3-211ENST00000497978 ACAP3Q96P50 834 aa12.89□□□□□ -0.35
NUDCD3-211ENST00000497978 MMTAG2Q9BU76 263 aaKnown RBP12.89□□□□□ -0.35
NUDCD3-211ENST00000497978 TARS2Q9BW92 718 aaKnown RBP12.89□□□□□ -0.35
NUDCD3-211ENST00000497978 PTPRHQ9HD43 1115 aa12.89□□□□□ -0.35
NUDCD3-211ENST00000497978 FAM86C1Q9NVL1 165 aa12.89□□□□□ -0.35
NUDCD3-211ENST00000497978 WNT16Q9UBV4 365 aa12.89□□□□□ -0.35
NUDCD3-211ENST00000497978 VWA3AA6NCI4 1184 aa12.88□□□□□ -0.35
NUDCD3-211ENST00000497978 SFI1A8K8P3 1242 aa12.88□□□□□ -0.35
NUDCD3-211ENST00000497978 PLS3P13797 630 aa12.88□□□□□ -0.35
NUDCD3-211ENST00000497978 FGFR3P22607 806 aa12.88□□□□□ -0.35
NUDCD3-211ENST00000497978 HOXA9P31269 272 aa12.88□□□□□ -0.35
NUDCD3-211ENST00000497978 OR1D2P34982 312 aa12.88□□□□□ -0.35
NUDCD3-211ENST00000497978 MAPK7Q13164 816 aa12.88□□□□□ -0.35
NUDCD3-211ENST00000497978 RAB33AQ14088 237 aa12.88□□□□□ -0.35
NUDCD3-211ENST00000497978 UVSSAQ2YD98 709 aa12.88□□□□□ -0.35
NUDCD3-211ENST00000497978 HYIQ5T013 277 aa12.88□□□□□ -0.35
NUDCD3-211ENST00000497978 ARL6IP4Q66PJ3 421 aaKnown RBP12.88□□□□□ -0.35
NUDCD3-211ENST00000497978 MPZL3Q6UWV2 235 aa12.88□□□□□ -0.35
NUDCD3-211ENST00000497978 ANKS3Q6ZW76 656 aa12.88□□□□□ -0.35
NUDCD3-211ENST00000497978 RTL10Q7L3V2 364 aa12.88□□□□□ -0.35
NUDCD3-211ENST00000497978 KCNK18Q7Z418 384 aa12.88□□□□□ -0.35
NUDCD3-211ENST00000497978 GRASPQ7Z6J2 395 aaPredicted RBP12.88□□□□□ -0.35
NUDCD3-211ENST00000497978 SLC44A3Q8N4M1 653 aa12.88□□□□□ -0.35
NUDCD3-211ENST00000497978 SYT2Q8N9I0 419 aaPredicted RBP12.88□□□□□ -0.35
NUDCD3-211ENST00000497978 SPIRE2Q8WWL2 714 aa12.88□□□□□ -0.35
NUDCD3-211ENST00000497978 RSAD2Q8WXG1 361 aa12.88□□□□□ -0.35
NUDCD3-211ENST00000497978 RTP3Q9BQQ7 232 aa12.88□□□□□ -0.35
NUDCD3-211ENST00000497978 NTPCRQ9BSD7 190 aaKnown RBP12.88□□□□□ -0.35
NUDCD3-211ENST00000497978 KCND2Q9NZV8 630 aa12.88□□□□□ -0.35
NUDCD3-211ENST00000497978 MTRRQ9UBK8 725 aa12.88□□□□□ -0.35
NUDCD3-211ENST00000497978 POLIQ9UNA4 740 aa12.88□□□□□ -0.35
NUDCD3-211ENST00000497978 SMC3Q9UQE7 1217 aa12.88□□□□□ -0.35
NUDCD3-211ENST00000497978 TRIP11Q15643 1979 aa12.87□□□□□ -0.35
NUDCD3-211ENST00000497978 H0YCG3 227 aa12.87□□□□□ -0.35
NUDCD3-211ENST00000497978 CCL16O15467 120 aa12.87□□□□□ -0.35
NUDCD3-211ENST00000497978 ADAM12O43184 909 aa12.87□□□□□ -0.35
NUDCD3-211ENST00000497978 NARSO43776 548 aaKnown RBP12.87□□□□□ -0.35
NUDCD3-211ENST00000497978 PPP1R37O75864 691 aa12.87□□□□□ -0.35
NUDCD3-211ENST00000497978 CFHP08603 1231 aa12.87□□□□□ -0.35
NUDCD3-211ENST00000497978 SRFP11831 508 aa12.87□□□□□ -0.35
NUDCD3-211ENST00000497978 HARSP12081 509 aaKnown RBP12.87□□□□□ -0.35
NUDCD3-211ENST00000497978 AOC1P19801 751 aa12.87□□□□□ -0.35
NUDCD3-211ENST00000497978 RAD51AP2Q09MP3 1159 aa12.87□□□□□ -0.35
NUDCD3-211ENST00000497978 XKR4Q5GH76 650 aa12.87□□□□□ -0.35
NUDCD3-211ENST00000497978 AXDND1Q5T1B0 1012 aaPredicted RBP12.87□□□□□ -0.35
NUDCD3-211ENST00000497978 CWF19L1Q69YN2 538 aaKnown RBP12.87□□□□□ -0.35
NUDCD3-211ENST00000497978 ALKAL1Q6UXT8 129 aa12.87□□□□□ -0.35
NUDCD3-211ENST00000497978 TAS1R3Q7RTX0 852 aa12.87□□□□□ -0.35
NUDCD3-211ENST00000497978 CEP120Q8N960 986 aa12.87□□□□□ -0.35
NUDCD3-211ENST00000497978 SLC7A14Q8TBB6 771 aa12.87□□□□□ -0.35
NUDCD3-211ENST00000497978 SNX27Q96L92 541 aa12.87□□□□□ -0.35
NUDCD3-211ENST00000497978 PLIN2Q99541 437 aa12.87□□□□□ -0.35
NUDCD3-211ENST00000497978 GOLGA2P5Q9HBQ8 144 aa12.87□□□□□ -0.35
NUDCD3-211ENST00000497978 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.87□□□□□ -0.35
NUDCD3-211ENST00000497978 BACE2Q9Y5Z0 518 aa12.87□□□□□ -0.35
NUDCD3-211ENST00000497978 CDY1Q9Y6F8 540 aa12.87□□□□□ -0.35
NUDCD3-211ENST00000497978 VWA8A3KMH1 1905 aa12.86□□□□□ -0.35
NUDCD3-211ENST00000497978 DOCK8Q8NF50 2099 aa12.86□□□□□ -0.35
NUDCD3-211ENST00000497978 ANHXE9PGG2 379 aa12.86□□□□□ -0.35
NUDCD3-211ENST00000497978 PODXLO00592 558 aa12.86□□□□□ -0.35
NUDCD3-211ENST00000497978 SLC26A4O43511 780 aa12.86□□□□□ -0.35
NUDCD3-211ENST00000497978 GFRA3O60609 400 aa12.86□□□□□ -0.35
NUDCD3-211ENST00000497978 TOM1L1O75674 476 aa12.86□□□□□ -0.35
NUDCD3-211ENST00000497978 POU2F2P09086 479 aa12.86□□□□□ -0.35
NUDCD3-211ENST00000497978 PLA2G4BP0C869 781 aa12.86□□□□□ -0.35
NUDCD3-211ENST00000497978 KCNE1P15382 129 aa12.86□□□□□ -0.35
NUDCD3-211ENST00000497978 NPR3P17342 541 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms