RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 SNX27Q96L92 541 aa16.75■□□□□ 0.27
NUP50-219ENST00000497960 TTPALQ9BTX7 342 aa16.75■□□□□ 0.27
NUP50-219ENST00000497960 FNIP2Q9P278 1114 aa16.75■□□□□ 0.27
NUP50-219ENST00000497960 RCOR1Q9UKL0 485 aa16.75■□□□□ 0.27
NUP50-219ENST00000497960 TBX20Q9UMR3 447 aa16.75■□□□□ 0.27
NUP50-219ENST00000497960 TMEM189-UBE2V1I3L0A0 370 aa16.74■□□□□ 0.27
NUP50-219ENST00000497960 HNRNPDLO14979 420 aaKnown RBP16.74■□□□□ 0.27
NUP50-219ENST00000497960 KCNE1P15382 129 aa16.74■□□□□ 0.27
NUP50-219ENST00000497960 STAT6P42226 847 aa16.74■□□□□ 0.27
NUP50-219ENST00000497960 KYAT1Q16773 422 aa16.74■□□□□ 0.27
NUP50-219ENST00000497960 PDXDC1Q6P996 788 aa16.74■□□□□ 0.27
NUP50-219ENST00000497960 TMC5Q6UXY8 1006 aa16.74■□□□□ 0.27
NUP50-219ENST00000497960 DYMQ7RTS9 669 aa16.74■□□□□ 0.27
NUP50-219ENST00000497960 MUTYHQ9UIF7 546 aa16.74■□□□□ 0.27
NUP50-219ENST00000497960 PCDHA7Q9UN72 937 aa16.74■□□□□ 0.27
NUP50-219ENST00000497960 NR2E1Q9Y466 385 aa16.74■□□□□ 0.27
NUP50-219ENST00000497960 TRAPPC3O43617 180 aa16.73■□□□□ 0.27
NUP50-219ENST00000497960 GPR37L1O60883 481 aa16.73■□□□□ 0.27
NUP50-219ENST00000497960 C1RP00736 705 aa16.73■□□□□ 0.27
NUP50-219ENST00000497960 CLTAP09496 248 aa16.73■□□□□ 0.27
NUP50-219ENST00000497960 WEE2P0C1S8 567 aa16.73■□□□□ 0.27
NUP50-219ENST00000497960 CLCNKBP51801 687 aa16.73■□□□□ 0.27
NUP50-219ENST00000497960 UPP1Q16831 310 aa16.73■□□□□ 0.27
NUP50-219ENST00000497960 HERC4Q5GLZ8 1057 aaPredicted RBP16.73■□□□□ 0.27
NUP50-219ENST00000497960 RTP2Q5QGT7 225 aa16.73■□□□□ 0.27
NUP50-219ENST00000497960 KANK3Q6NY19 840 aa16.73■□□□□ 0.27
NUP50-219ENST00000497960 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.73■□□□□ 0.27
NUP50-219ENST00000497960 PALB2Q86YC2 1186 aa16.73■□□□□ 0.27
NUP50-219ENST00000497960 DDX12PQ92771 950 aa16.73■□□□□ 0.27
NUP50-219ENST00000497960 PANK2Q9BZ23 570 aa16.73■□□□□ 0.27
NUP50-219ENST00000497960 POMKQ9H5K3 350 aa16.73■□□□□ 0.27
NUP50-219ENST00000497960 GOLGA2P5Q9HBQ8 144 aa16.73■□□□□ 0.27
NUP50-219ENST00000497960 MAN1C1Q9NR34 630 aa16.73■□□□□ 0.27
NUP50-219ENST00000497960 CNTN3Q9P232 1028 aa16.73■□□□□ 0.27
NUP50-219ENST00000497960 CDH22Q9UJ99 828 aa16.73■□□□□ 0.27
NUP50-219ENST00000497960 TRIP11Q15643 1979 aa16.73■□□□□ 0.27
NUP50-219ENST00000497960 PIGRP01833 764 aa16.72■□□□□ 0.27
NUP50-219ENST00000497960 RPL17P18621 184 aaKnown RBP16.72■□□□□ 0.27
NUP50-219ENST00000497960 SP100P23497 879 aaPredicted RBP16.72■□□□□ 0.27
NUP50-219ENST00000497960 NMT1P30419 496 aaKnown RBP16.72■□□□□ 0.27
NUP50-219ENST00000497960 GTF2BQ00403 316 aa16.72■□□□□ 0.27
NUP50-219ENST00000497960 PSMD5Q16401 504 aa16.72■□□□□ 0.27
NUP50-219ENST00000497960 SEZ6Q53EL9 994 aa16.72■□□□□ 0.27
NUP50-219ENST00000497960 PRSS55Q6UWB4 352 aaPredicted RBP16.72■□□□□ 0.27
NUP50-219ENST00000497960 GPR149Q86SP6 731 aa16.72■□□□□ 0.27
NUP50-219ENST00000497960 GLYCTKQ8IVS8 523 aa16.72■□□□□ 0.27
NUP50-219ENST00000497960 HDAC7Q8WUI4 952 aa16.72■□□□□ 0.27
NUP50-219ENST00000497960 PIK3R5Q8WYR1 880 aa16.72■□□□□ 0.27
NUP50-219ENST00000497960 ZMAT2Q96NC0 199 aaKnown RBP16.72■□□□□ 0.27
NUP50-219ENST00000497960 LRFN3Q9BTN0 628 aa16.72■□□□□ 0.27
NUP50-219ENST00000497960 PLEKHA4Q9H4M7 779 aa16.72■□□□□ 0.27
NUP50-219ENST00000497960 PLEKHA5Q9HAU0 1116 aa16.72■□□□□ 0.27
NUP50-219ENST00000497960 FAM13BQ9NYF5 915 aa16.72■□□□□ 0.27
NUP50-219ENST00000497960 CITO14578 2027 aa16.71■□□□□ 0.27
NUP50-219ENST00000497960 FAM86C2PA6NEL3 165 aa16.71■□□□□ 0.27
NUP50-219ENST00000497960 MYMKA6NI61 221 aa16.71■□□□□ 0.27
NUP50-219ENST00000497960 PODXLO00592 558 aa16.71■□□□□ 0.27
NUP50-219ENST00000497960 CXCL8P10145 99 aa16.71■□□□□ 0.27
NUP50-219ENST00000497960 GAP43P17677 238 aa16.71■□□□□ 0.27
NUP50-219ENST00000497960 RPL9P32969 192 aaKnown RBP16.71■□□□□ 0.27
NUP50-219ENST00000497960 SOX4Q06945 474 aaPredicted RBP16.71■□□□□ 0.27
NUP50-219ENST00000497960 SLC10A6Q3KNW5 377 aa16.71■□□□□ 0.27
NUP50-219ENST00000497960 AXDND1Q5T1B0 1012 aaPredicted RBP16.71■□□□□ 0.27
NUP50-219ENST00000497960 SHC4Q6S5L8 630 aa16.71■□□□□ 0.27
NUP50-219ENST00000497960 C15orf39Q6ZRI6 1047 aa16.71■□□□□ 0.27
NUP50-219ENST00000497960 SFR1Q86XK3 245 aa16.71■□□□□ 0.27
NUP50-219ENST00000497960 MAP4K3Q8IVH8 894 aa16.71■□□□□ 0.27
NUP50-219ENST00000497960 PDILTQ8N807 584 aa16.71■□□□□ 0.27
NUP50-219ENST00000497960 CMASQ8NFW8 434 aaPredicted RBP16.71■□□□□ 0.27
NUP50-219ENST00000497960 LNX1Q8TBB1 728 aaPredicted RBP16.71■□□□□ 0.27
NUP50-219ENST00000497960 FIZ1Q96SL8 496 aa16.71■□□□□ 0.27
NUP50-219ENST00000497960 MSTO1Q9BUK6 570 aa16.71■□□□□ 0.27
NUP50-219ENST00000497960 ST6GALNAC4Q9H4F1 302 aa16.71■□□□□ 0.27
NUP50-219ENST00000497960 SEL1LQ9UBV2 794 aa16.71■□□□□ 0.27
NUP50-219ENST00000497960 NUB1Q9Y5A7 615 aa16.71■□□□□ 0.27
NUP50-219ENST00000497960 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.71■□□□□ 0.27
NUP50-219ENST00000497960 GOLGA6L4A6NEF3 574 aa16.7■□□□□ 0.26
NUP50-219ENST00000497960 OGTO15294 1046 aa16.7■□□□□ 0.26
NUP50-219ENST00000497960 TGM5O43548 720 aa16.7■□□□□ 0.26
NUP50-219ENST00000497960 SPATA31D3P0C874 917 aa16.7■□□□□ 0.26
NUP50-219ENST00000497960 MYBP10242 640 aa16.7■□□□□ 0.26
NUP50-219ENST00000497960 IDEP14735 1019 aa16.7■□□□□ 0.26
NUP50-219ENST00000497960 COL9A1P20849 921 aa16.7■□□□□ 0.26
NUP50-219ENST00000497960 FGFR3P22607 806 aa16.7■□□□□ 0.26
NUP50-219ENST00000497960 PPP2R3AQ06190 1150 aa16.7■□□□□ 0.26
NUP50-219ENST00000497960 RESP18Q5W5W9 173 aa16.7■□□□□ 0.26
NUP50-219ENST00000497960 SLFN12LQ6IEE8 588 aa16.7■□□□□ 0.26
NUP50-219ENST00000497960 CYP26C1Q6V0L0 522 aa16.7■□□□□ 0.26
NUP50-219ENST00000497960 SPATA31D4Q6ZUB0 917 aa16.7■□□□□ 0.26
NUP50-219ENST00000497960 CCDC149Q6ZUS6 474 aa16.7■□□□□ 0.26
NUP50-219ENST00000497960 ZNF720Q7Z2F6 126 aa16.7■□□□□ 0.26
NUP50-219ENST00000497960 TDRD5Q8NAT2 981 aaKnown RBP16.7■□□□□ 0.26
NUP50-219ENST00000497960 C18orf25Q96B23 403 aaPredicted RBP16.7■□□□□ 0.26
NUP50-219ENST00000497960 HVCN1Q96D96 273 aa16.7■□□□□ 0.26
NUP50-219ENST00000497960 LRRC27Q9C0I9 530 aa16.7■□□□□ 0.26
NUP50-219ENST00000497960 HAPLN2Q9GZV7 340 aa16.7■□□□□ 0.26
NUP50-219ENST00000497960 MRPL44Q9H9J2 332 aaKnown RBP16.7■□□□□ 0.26
NUP50-219ENST00000497960 RPF1Q9H9Y2 349 aaKnown RBP16.7■□□□□ 0.26
NUP50-219ENST00000497960 A0A087X0B3 334 aa16.69■□□□□ 0.26
NUP50-219ENST00000497960 A0A0B4J269 797 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms