RNA–Protein interactions for RNA: ENST00000497957.1

PTK7-220, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-220ENST00000497957 PLAGL2Q9UPG8 496 aa17.28■□□□□ 0.36
PTK7-220ENST00000497957 FHOD1Q9Y613 1164 aa17.28■□□□□ 0.36
PTK7-220ENST00000497957 SQORQ9Y6N5 450 aa17.28■□□□□ 0.36
PTK7-220ENST00000497957 TRIP11Q15643 1979 aa17.28■□□□□ 0.36
PTK7-220ENST00000497957 CST3P01034 146 aaPredicted RBP17.27■□□□□ 0.36
PTK7-220ENST00000497957 PNMA6AP0CW24 399 aaPredicted RBP17.27■□□□□ 0.36
PTK7-220ENST00000497957 ZACNQ401N2 412 aa17.27■□□□□ 0.36
PTK7-220ENST00000497957 PLEKHG4Q58EX7 1191 aa17.27■□□□□ 0.36
PTK7-220ENST00000497957 E4F1Q66K89 784 aaPredicted RBP17.27■□□□□ 0.36
PTK7-220ENST00000497957 KRT39Q6A163 491 aa17.27■□□□□ 0.36
PTK7-220ENST00000497957 TRIM65Q6PJ69 517 aa17.27■□□□□ 0.36
PTK7-220ENST00000497957 ALKAL1Q6UXT8 129 aa17.27■□□□□ 0.36
PTK7-220ENST00000497957 AGMOQ6ZNB7 445 aa17.27■□□□□ 0.36
PTK7-220ENST00000497957 WDR49Q8IV35 697 aa17.27■□□□□ 0.36
PTK7-220ENST00000497957 TC2NQ8N9U0 490 aa17.27■□□□□ 0.36
PTK7-220ENST00000497957 CACTINQ8WUQ7 758 aaKnown RBP17.27■□□□□ 0.36
PTK7-220ENST00000497957 TATDN2Q93075 761 aa17.27■□□□□ 0.36
PTK7-220ENST00000497957 KCNF1Q9H3M0 494 aa17.27■□□□□ 0.36
PTK7-220ENST00000497957 NLRC4Q9NPP4 1024 aa17.27■□□□□ 0.36
PTK7-220ENST00000497957 CACNG4Q9UBN1 327 aa17.27■□□□□ 0.36
PTK7-220ENST00000497957 TUBGCP4Q9UGJ1 667 aa17.27■□□□□ 0.36
PTK7-220ENST00000497957 SIX4Q9UIU6 781 aa17.27■□□□□ 0.36
PTK7-220ENST00000497957 PTGESO14684 152 aa17.26■□□□□ 0.35
PTK7-220ENST00000497957 PPEF2O14830 753 aa17.26■□□□□ 0.35
PTK7-220ENST00000497957 IL18RAPO95256 599 aa17.26■□□□□ 0.35
PTK7-220ENST00000497957 PTMAP06454 111 aaKnown RBP17.26■□□□□ 0.35
PTK7-220ENST00000497957 ZSCAN20P17040 1043 aaPredicted RBP17.26■□□□□ 0.35
PTK7-220ENST00000497957 IGFBP6P24592 240 aaPredicted RBP17.26■□□□□ 0.35
PTK7-220ENST00000497957 SOX4Q06945 474 aaPredicted RBP17.26■□□□□ 0.35
PTK7-220ENST00000497957 ENPEPQ07075 957 aa17.26■□□□□ 0.35
PTK7-220ENST00000497957 BIRC3Q13489 604 aa17.26■□□□□ 0.35
PTK7-220ENST00000497957 KLHDC7AQ5VTJ3 777 aa17.26■□□□□ 0.35
PTK7-220ENST00000497957 IQCEQ6IPM2 695 aa17.26■□□□□ 0.35
PTK7-220ENST00000497957 PHLDB3Q6NSJ2 640 aa17.26■□□□□ 0.35
PTK7-220ENST00000497957 TRAPPC11Q7Z392 1133 aa17.26■□□□□ 0.35
PTK7-220ENST00000497957 MRPL10Q7Z7H8 261 aaKnown RBP17.26■□□□□ 0.35
PTK7-220ENST00000497957 ECHDC2Q86YB7 292 aa17.26■□□□□ 0.35
PTK7-220ENST00000497957 C1orf127Q8N9H9 656 aa17.26■□□□□ 0.35
PTK7-220ENST00000497957 USP38Q8NB14 1042 aa17.26■□□□□ 0.35
PTK7-220ENST00000497957 CXorf38Q8TB03 319 aa17.26■□□□□ 0.35
PTK7-220ENST00000497957 KIF12Q96FN5 646 aa17.26■□□□□ 0.35
PTK7-220ENST00000497957 APOBEC3GQ9HC16 384 aaKnown RBP17.26■□□□□ 0.35
PTK7-220ENST00000497957 CITO14578 2027 aa17.25■□□□□ 0.35
PTK7-220ENST00000497957 PDCD11Q14690 1871 aaKnown RBP17.25■□□□□ 0.35
PTK7-220ENST00000497957 C9IYK1 514 aa17.25■□□□□ 0.35
PTK7-220ENST00000497957 CXCL10P02778 98 aa17.25■□□□□ 0.35
PTK7-220ENST00000497957 ITGA4P13612 1032 aa17.25■□□□□ 0.35
PTK7-220ENST00000497957 GTF2H1P32780 548 aa17.25■□□□□ 0.35
PTK7-220ENST00000497957 PIK3CAP42336 1068 aa17.25■□□□□ 0.35
PTK7-220ENST00000497957 GATMP50440 423 aa17.25■□□□□ 0.35
PTK7-220ENST00000497957 MYL6P60660 151 aa17.25■□□□□ 0.35
PTK7-220ENST00000497957 POLR2FP61218 127 aaKnown RBP17.25■□□□□ 0.35
PTK7-220ENST00000497957 TMEM132DQ14C87 1099 aa17.25■□□□□ 0.35
PTK7-220ENST00000497957 ZNF598Q86UK7 904 aaKnown RBP17.25■□□□□ 0.35
PTK7-220ENST00000497957 NEK11Q8NG66 645 aa17.25■□□□□ 0.35
PTK7-220ENST00000497957 BAP1Q92560 729 aa17.25■□□□□ 0.35
PTK7-220ENST00000497957 GAD1Q99259 594 aa17.25■□□□□ 0.35
PTK7-220ENST00000497957 GOLGA2P5Q9HBQ8 144 aa17.25■□□□□ 0.35
PTK7-220ENST00000497957 RGS18Q9NS28 235 aa17.25■□□□□ 0.35
PTK7-220ENST00000497957 CNTN3Q9P232 1028 aa17.25■□□□□ 0.35
PTK7-220ENST00000497957 COQ4Q9Y3A0 265 aa17.25■□□□□ 0.35
PTK7-220ENST00000497957 SMIM28A0A1B0GU29 152 aa17.24■□□□□ 0.35
PTK7-220ENST00000497957 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.24■□□□□ 0.35
PTK7-220ENST00000497957 GTPBP10A4D1E9 387 aaKnown RBP17.24■□□□□ 0.35
PTK7-220ENST00000497957 ENPP3O14638 875 aa17.24■□□□□ 0.35
PTK7-220ENST00000497957 KIAA0355O15063 1070 aa17.24■□□□□ 0.35
PTK7-220ENST00000497957 PMM2O15305 246 aa17.24■□□□□ 0.35
PTK7-220ENST00000497957 STX10O60499 249 aa17.24■□□□□ 0.35
PTK7-220ENST00000497957 N4BP1O75113 896 aaKnown RBP17.24■□□□□ 0.35
PTK7-220ENST00000497957 MFAP3LO75121 409 aa17.24■□□□□ 0.35
PTK7-220ENST00000497957 TMEM191BP0C7N4 346 aa17.24■□□□□ 0.35
PTK7-220ENST00000497957 MLH1P40692 756 aa17.24■□□□□ 0.35
PTK7-220ENST00000497957 SURF1Q15526 300 aa17.24■□□□□ 0.35
PTK7-220ENST00000497957 ZBTB6Q15916 424 aa17.24■□□□□ 0.35
PTK7-220ENST00000497957 KYAT1Q16773 422 aa17.24■□□□□ 0.35
PTK7-220ENST00000497957 XKR4Q5GH76 650 aa17.24■□□□□ 0.35
PTK7-220ENST00000497957 RRAGAQ7L523 313 aa17.24■□□□□ 0.35
PTK7-220ENST00000497957 APBB1IPQ7Z5R6 666 aaPredicted RBP17.24■□□□□ 0.35
PTK7-220ENST00000497957 PPFIBP1Q86W92 1011 aa17.24■□□□□ 0.35
PTK7-220ENST00000497957 GSTCDQ8NEC7 633 aa17.24■□□□□ 0.35
PTK7-220ENST00000497957 FBXL13Q8NEE6 735 aa17.24■□□□□ 0.35
PTK7-220ENST00000497957 SEPT8Q92599 483 aa17.24■□□□□ 0.35
PTK7-220ENST00000497957 RAB20Q9NX57 234 aa17.24■□□□□ 0.35
PTK7-220ENST00000497957 IMPACTQ9P2X3 320 aa17.24■□□□□ 0.35
PTK7-220ENST00000497957 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.24■□□□□ 0.35
PTK7-220ENST00000497957 A0A0U1RQF3 1178 aa17.23■□□□□ 0.35
PTK7-220ENST00000497957 AKR1B15C9JRZ8 316 aaPredicted RBP17.23■□□□□ 0.35
PTK7-220ENST00000497957 P4HA2O15460 535 aa17.23■□□□□ 0.35
PTK7-220ENST00000497957 PHACTR2O75167 634 aa17.23■□□□□ 0.35
PTK7-220ENST00000497957 TIMP1P01033 207 aa17.23■□□□□ 0.35
PTK7-220ENST00000497957 ACRP10323 421 aa17.23■□□□□ 0.35
PTK7-220ENST00000497957 FGFR1P11362 822 aa17.23■□□□□ 0.35
PTK7-220ENST00000497957 CSF2RAP15509 400 aa17.23■□□□□ 0.35
PTK7-220ENST00000497957 TRIM21P19474 475 aaKnown RBP17.23■□□□□ 0.35
PTK7-220ENST00000497957 YARSP54577 528 aaKnown RBP17.23■□□□□ 0.35
PTK7-220ENST00000497957 NCOA4Q13772 614 aa17.23■□□□□ 0.35
PTK7-220ENST00000497957 DUOXA2Q1HG44 320 aa17.23■□□□□ 0.35
PTK7-220ENST00000497957 PDXDC1Q6P996 788 aa17.23■□□□□ 0.35
PTK7-220ENST00000497957 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.23■□□□□ 0.35
PTK7-220ENST00000497957 C7orf61Q8IZ16 206 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms